DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Socs1 | mmu-miR-331-3p | beg:301 | end:312 | pic:3' AAGATCCTATCCGGGTCCCCG 5'& |||||||. &5' -------------CCAGGGGT 3' |
Socs1 | mmu-miR-711 | beg:196 | end:214 | pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& ||| |.||||||||| &5' -------CTCCCTCCGGGTCCC 3' |
Socs1 | mmu-let-7g | beg:255 | end:269 | pic:3' TTGACATGTTTGATGATGGAGT 5'& ||| ||||||| &5' ----------ACTCCTACCTC- 3' |
Socs1 | mmu-let-7i | beg:255 | end:269 | pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ||| ||||||| &5' ----------ACTCCTACCTC- 3' |
Socs1 | mmu-miR-1961 | beg:255 | end:269 | pic:3' AAGATTGATGATGGAGT 5'& ||| ||||||| &5' -----ACTCCTACCTC- 3' |
Socs1 | mmu-let-7a | beg:256 | end:269 | pic:3' TTGATATGTTGGATGATGGAGT 5'& || ||||||| &5' -----------CTCCTACCTC- 3' |
Socs1 | mmu-let-7c | beg:256 | end:269 | pic:3' TTGGTATGTTGGATGATGGAGT 5'& || ||||||| &5' -----------CTCCTACCTC- 3' |
Socs1 | mmu-let-7f | beg:256 | end:269 | pic:3' TTGATATGTTAGATGATGGAGT 5'& || ||||||| &5' -----------CTCCTACCTC- 3' |
Socs1 | mmu-let-7d | beg:256 | end:270 | pic:3' TTGATACGTTGGATGATGGAGA 5'& || |||||||| &5' -----------CTCCTACCTCT 3' |
Socs1 | mmu-miR-125a-5p | beg:165 | end:176 | pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& ||||||||. &5' ---------------TCTCAGGGG 3' |
Socs1 | mmu-miR-125b-5p | beg:165 | end:176 | pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& ||||||||. &5' -------------TCTCAGGGG 3' |
Socs1 | mmu-miR-203star | beg:69 | end:83 | pic:3' ACAACTTGACAGTTCTTGGTGA 5'& || .||||||| &5' ----------TCTGGAACCAC- 3' |
Socs1 | mmu-miR-1966 | beg:187 | end:205 | pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& |||||| |. ||||||| &5' ------CTCCTG-GT--GCTCCCT- 3' |
Socs1 | mmu-miR-3072star | beg:196 | end:214 | pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||||||| ||||||| &5' ------CTCCCTCCGGGTCCC- 3' |
Socs1 | mcmv-miR-m01-3 | beg:313 | end:335 | pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& |||| | | ||||||.. &5' --GAGGGT-CTCTGGCTTCATT- 3' |
Socs1 | mghv-miR-M1-1 | beg:316 | end:337 | pic:3' TTTCCTTCATGCCG--GTAAAGAT 5'& |||. .||| |||||.| &5' --AGGGTCTCTGGCTTCATTTTT- 3' |
Socs1 | mmu-let-7e | beg:246 | end:269 | pic:3' TTGATATGTTG-GAGGATGGAGT 5'& ||. |. | |||||||||| &5' --CTGAATTCCACTCCTACCTC- 3' |
Socs1 | mmu-miR-1224 | beg:256 | end:282 | pic:3' GAGG-TGGAGGGGT-CAGGAGTG 5'& |||| |||||.||| ||. ||. &5' CTCCTACCTCTCCATGTTTACAT 3' |
Socs1 | mmu-miR-1274a | beg:229 | end:253 | pic:3' ACCGCGGA-CTTGTCCCTGGACT 5'& |.|.|| |..| |||||||| &5' --GTGTCTGGGGCCAGGACCTGA 3' |
Socs1 | mmu-miR-127star | beg:314 | end:333 | pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& ||.| .||||| |||||| &5' ---AGGG-TCTCTG-GCTTCA- 3' |
Socs1 | mmu-miR-146bstar | beg:220 | end:243 | pic:3' TGGTC-TTGACTCAGGGATCCCG 5'& .|| |.|| || .||.|||| &5' --TAGCAGCTT-GTGTCTGGGGC 3' |
Socs1 | mmu-miR-1894-5p | beg:302 | end:321 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||| ||| ||||||.| &5' -----CAGG-GGTCGGGGAGGG 3' |
Socs1 | mmu-miR-1906 | beg:324 | end:345 | pic:3' TCGGGACGGAGTCC---GACGACGT 5'& ||.||| ||||||. &5' ------GCTTCATTTTTCTGCTGT- 3' |
Socs1 | mmu-miR-1927 | beg:301 | end:313 | pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& ||||.|||| &5' --------------CCAGGGGTC 3' |
Socs1 | mmu-miR-1927 | beg:156 | end:178 | pic:3' AGTCAGGGATTGTAG-GTCTCCAG 5'& ||| |||| || || |||.||| &5' TCA-TCCC--ACCTCTCAGGGGT- 3' |
Socs1 | mmu-miR-1930 | beg:105 | end:127 | pic:3' TGCGACGTCCA----TGATACCTCCA 5'& | ||| ..|.|||||| &5' -----GGAGGGAGTGGTTGTGGAGG- 3' |
Socs1 | mmu-miR-1931 | beg:283 | end:300 | pic:3' CGGTAGCGTGGTCG--GGAACGTA 5'& ||||. |.||||| &5' ---------CCAGTATCTTTGCA- 3' |
Socs1 | mmu-miR-1952 | beg:170 | end:183 | pic:3' GTCTTC-CTCCCACCTCT 5'& |||..| |.||||| &5' CAGGGGTGGGGGTG---- 3' |
Socs1 | mmu-miR-1955 | beg:219 | end:243 | pic:3' TTTTCGACGTC--ACGTAGGACCCTGA 5'& |. |||| ||..| |||||.| &5' ----GTAGCAGCTTGTGT-CTGGGGC- 3' |
Socs1 | mmu-miR-1959 | beg:265 | end:288 | pic:3' GAGGTGACTCGATGTAGGGG 5'& |||||. |.||.||| &5' CTCCATGTTTACATATTCCC 3' |
Socs1 | mmu-miR-1982.1 | beg:111 | end:133 | pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||| | ||||||||| &5' --GTGGTTGTGG--AGGGTGAGA 3' |
Socs1 | mmu-miR-19a | beg:286 | end:302 | pic:3' AGTCAAAACGTATCTAAACGTGT 5'& |.|| |||||||| &5' --------GTATC--TTTGCACA 3' |
Socs1 | mmu-miR-19b | beg:286 | end:302 | pic:3' AGTCAAAACGTACCTAAACGTGT 5'& |.|| |||||||| &5' --------GTATC--TTTGCACA 3' |
Socs1 | mmu-miR-2135 | beg:140 | end:160 | pic:3' CAAAGCCGGGGTTCTGGAGA 5'& ||| | |. .||||||| &5' --TTCTGGCTGGAGACCTC- 3' |
Socs1 | mmu-miR-2146 | beg:77 | end:94 | pic:3' GTGTACCTTGGGAAGAGGTG 5'& |||.|||.| || |||| &5' CACGTGGGAGCC--CTCC-- 3' |
Socs1 | mmu-miR-29b | beg:181 | end:201 | pic:3' TTGTGACTAAAGTTTACCACGAT 5'& . || || ||||||| &5' -GTGCTCCCCTCC--TGGTGCT- 3' |
Socs1 | mmu-miR-29bstar | beg:287 | end:308 | pic:3' ATTTGGTGGTATAC---TTTGGTCG 5'& .|.| || ||||||| &5' -----TATCTT-TGCACAAACCAG- 3' |
Socs1 | mmu-miR-29c | beg:191 | end:201 | pic:3' ATTGGCTAAAGTTTACCACGAT 5'& ||||||| &5' --------------TGGTGCT- 3' |
Socs1 | mmu-miR-30a | beg:262 | end:281 | pic:3' GAAGGTCAGCTCCTACAAATGT 5'& || || ||||||||| &5' ---CCTCTCC---ATGTTTACA 3' |
Socs1 | mmu-miR-30d | beg:262 | end:281 | pic:3' GAAGGTCAGCCCCTACAAATGT 5'& || || ||||||||| &5' ---CCTCTCC---ATGTTTACA 3' |
Socs1 | mmu-miR-30e | beg:262 | end:281 | pic:3' GAAGGTCAGTTCCTACAAATGT 5'& || || ||||||||| &5' ---CCTCTCC---ATGTTTACA 3' |
Socs1 | mmu-miR-322star | beg:216 | end:236 | pic:3' CACAACGTCG-CGAAGTACAAA 5'& ||||.||| |||| .||| &5' --GTTGTAGCAGCTT-GTGT-- 3' |
Socs1 | mmu-miR-327 | beg:188 | end:206 | pic:3' TAGGAGTACG-GGGAGTTCA 5'& |||| .||| ||||| &5' -TCCTGGTGCTCCCTC---- 3' |
Socs1 | mmu-miR-331-3p | beg:166 | end:178 | pic:3' AAGATCCTATCCGGGTCCCCG 5'& |.||||||. &5' ------------CTCAGGGGT 3' |
Socs1 | mmu-miR-339-3p | beg:181 | end:202 | pic:3' GC-CGAGACAGCGGCTCCGCGAGT 5'& | |||| | || ||.|||| &5' -GTGCTCCC-CTCCT-GGTGCTC- 3' |
Socs1 | mmu-miR-343 | beg:97 | end:115 | pic:3' AGACCCGTGTACTTCCCTCT 5'& |||||. |.|||||| &5' -CTGGGTC---GGAGGGAG- 3' |
Socs1 | mmu-miR-3473 | beg:259 | end:273 | pic:3' CCGACTCGGTAGAGAGGT 5'& |.| ||||||| &5' -------CTACCTCTCCA 3' |
Socs1 | mmu-miR-3474 | beg:153 | end:176 | pic:3' CTTAGGTGCAGA--GGAGGGTCCC 5'& || | || ||||.||||| &5' ----CCTCATCCCACCTCTCAGGG 3' |
Socs1 | mmu-miR-450b-3p | beg:268 | end:291 | pic:3' TACGTACGTTTTAC-AAGGGTTA 5'& ||||. ||||||.| &5' ---CATGTTTACATATTCCCAGT 3' |
Socs1 | mmu-miR-483star | beg:169 | end:184 | pic:3' TTCTGCCCTCCCC-TCCTCACT 5'& ||||| .||.||| &5' --------AGGGGTGGGGGTG- 3' |
Socs1 | mmu-miR-488star | beg:225 | end:241 | pic:3' AACTCTCACGATAATAGACCC 5'& ||| |.|||||| &5' --------GCTTGTGTCTGGG 3' |
Socs1 | mmu-miR-532-3p | beg:163 | end:183 | pic:3' ACGTTCGGAA---CCCACACCCTCC 5'& ||| ||| |||||.| &5' ------CCTCTCAGGG-GTGGGGG- 3' |
Socs1 | mmu-miR-532-3p | beg:15 | end:35 | pic:3' ACGTTCGGAACCCACACCCTCC 5'& || ||| |||||.| &5' -GC-AGCATTAA--GTGGGGG- 3' |
Socs1 | mmu-miR-539 | beg:31 | end:51 | pic:3' TGTGTGGTTCCTATTAAAGAGG 5'& .|.|| ||||||. &5' --GCGCCTTATT--ATTTCTT- 3' |
Socs1 | mmu-miR-544 | beg:336 | end:352 | pic:3' CTCGAACGATTTTTACGTCTTA 5'& |||| .|||||||| &5' -----TGCT----GTGCAGAAT 3' |
Socs1 | mmu-miR-665 | beg:176 | end:198 | pic:3' TCCCTGGAGTCGGAGGACCA 5'& .||| ||| ||||||||| &5' GGGGTGCTCC-CCTCCTGGT 3' |
Socs1 | mmu-miR-670 | beg:158 | end:178 | pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& || |||| | |||||||.| &5' -TC-CCAC---CTCTCAGGGGT 3' |
Socs1 | mmu-miR-705 | beg:154 | end:173 | pic:3' ACGGGTGGGGTGGAGGGTGG 5'& |.||.||||||||.|| &5' --CTCATCCCACCTCTCA-- 3' |
Socs1 | mmu-miR-705 | beg:252 | end:274 | pic:3' ACGGGTG-GGGTGGAG-GGTGG 5'& .|||| ||.||||| |||. &5' --TCCACTCCTACCTCTCCAT- 3' |
Socs1 | mmu-miR-761 | beg:326 | end:345 | pic:3' ACACAGTCAAAGTG---GGACGACG 5'& ||||. .||||||. &5' ---------TTCATTTTTCTGCTGT 3' |
Socs1 | mmu-miR-92astar | beg:149 | end:169 | pic:3' CATTACGGTGGTTAGGGGTGGA 5'& | ||| .||||||| &5' -----GAGACCTCATCCCACCT 3' |
Socs1 | mmu-miR-98 | beg:249 | end:269 | pic:3' TTGTTATGTTGAATGATGGAGT 5'& ||| | ||| ||||||| &5' ---AATTCCACTC-CTACCTC- 3' |