DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Cbx4; Pc2 ATTTA 125-1780 2165-2169;2179-2183;2207-2211 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Cbx4; Pc2 WTATTTATW 125-1780 2163-2171 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Cbx4; Pc2 WWATTTAWW 125-1780 2163-2171 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Cbx4; Pc2 WWTATTTATWW 125-1780 2162-2172 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.! Cbx4; Pc2 WWWATTTAWWW 125-1780 2162-2172 Identification of a target RNA motif for RNA-binding protein HuR.#Proc Natl Acad Sci U S A 2004; 101(9): 2987-92.!

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT011584 mmu-miR-15a-5p Mus musculus Cbx4 12418 Mus musculus Sequencing Functional MTI (Weak) 19536157 MIRT584451 mmu-miR-3074-1-3p Mus musculus Cbx4 12418 Mus musculus HITS-CLIP Functional MTI (Weak) 25083871

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004530 mmu-miR-127* 12418 Cbx4 uagucucggGAGACUCGAAGuc || | |||||| augucugaaCUAUAAGCUUCca 3 14 666 687 [mm9:11:118941519-118941540:-] 0.6033 129 0 -10.96 -0.2393 MIMAT0004531 mmu-miR-135a* 12418 Cbx4 gcGGUGCCGAGGUUAGGGAUAu ||||| | || ||||||| cgCCACGUC-CCCUUCCCUAUa 2 21 158 178 [mm9:11:118942028-118942048:-] 0.5368 162 7 -32.22 -0.1706 MIMAT0004534 mmu-miR-145* 12418 Cbx4 guucuugucauAAAGGUCCUUa | |||||||| uuauuuccccuUCUCCAGGAAc 2 12 521 542 [mm9:11:118941664-118941685:-] 0.5718 147 7 -11.69 -0.5417 MIMAT0004540 mmu-miR-186* 12418 Cbx4 ggGUUUUUUAAGUGGAAUCCCg | :| || | |||||||| gcCCGACUAUCCCCCUUAGGGc 2 21 341 362 [mm9:11:118941844-118941865:-] 0.5817 156 7 -25.77 -0.1830 MIMAT0000218 mmu-miR-24-1* 12418 Cbx4 ugacUAUAGUCGAGUCAUCCGUg ||||: :|: |||||:| auauAUAUUUAUUU-GUAGGUAu 2 20 379 400 [mm9:11:118941806-118941827:-] 0.5817 137 0 -13.31 -0.1695 MIMAT0004573 mmu-miR-293* 12418 Cbx4 guUUUACAGUGUGUCAAACUCa |||||| |: ||||||| ugAAAUGU---AUUGUUUGAGc 2 21 315 333 [mm9:11:118941873-118941891:-] 0.6020 156 7 -13.71 -0.8734 MIMAT0005440 mmu-miR-24-2* 12418 Cbx4 ugacaAAGUCGAGUCAUCCGUg ||:| |: |||||:| auauaUUUA--UUUGUAGGUAu 2 18 381 400 [mm9:11:118941806-118941825:-] 0.5817 130 0 -10.99 -0.1807 MIMAT0000549 mmu-miR-322* 12418 Cbx4 cacaacgucgcgaAGUACAAa ||||||| aguuuccucuagaUCAUGUUa 2 9 435 455 [mm9:11:118941751-118941771:-] 0.5817 140 7 -7.67 -1.2192 MIMAT0004638 mmu-miR-323-5p 12418 Cbx4 cgcuugcGCGGUGCCUGGUGGa | |:::|||||||| gagccuuCCCUGUGGACCACCa 2 16 187 208 [mm9:11:118941998-118942019:-] 0.5368 155 7 -22.93 -0.3303 MIMAT0004647 mmu-miR-338-5p 12418 Cbx4 gugAGUCGUGGUCCUAUAACaa | :|:|:: |||||| uugUAGGUAUUUAUAUAUUGaa 3 20 391 412 [mm9:11:118941794-118941815:-] 0.5817 127 0 -7.55 -0.2926 MIMAT0000593 mmu-miR-344 12418 Cbx4 ugucagucCGAAACCGAUCUAGu |:|| ||||||| uuuauggaGUUUCCUCUAGAUCa 2 16 428 450 [mm9:11:118941756-118941778:-] 0.5817 147 7 -13.56 -1.1342 MIMAT0004665 mmu-miR-218-1* 12418 Cbx4 ccacgaacugccUUGGUACAAa :|:|||||| gaguuuccucuaGAUCAUGUUa 2 11 434 455 [mm9:11:118941751-118941772:-] 0.5817 130 6 -10.12 -0.2092 MIMAT0004670 mmu-miR-7a* 12418 Cbx4 auaccgucugacacUAAACAAc :|||||| gugcaaaaaaaaaaGUUUGUUa 2 9 606 627 [mm9:11:118941579-118941600:-] 0.6033 124 6 -3.63 -0.2655 MIMAT0001637 mmu-miR-452 12418 Cbx4 cagaguCAAAGG-AGACGUUUgu |||||: | |||||| uguguuGUUUCUAUGUGCAAAaa 3 17 592 614 [mm9:11:118941592-118941614:-] 0.6033 139 0 -13.93 -0.1730 MIMAT0002105 mmu-miR-464 12418 Cbx4 auagagUGU-CUUAUUUGAACCAu ||| |:||| |||||| acugcgACACCAGUAACCUUGGUa 2 18 541 564 [mm9:11:118941642-118941665:-] 0.6033 132 6 -16.47 -0.1014 MIMAT0002106 mmu-miR-465a-5p 12418 Cbx4 agUGUAGUCACGGUAAGA--UUUAu ||:| :|||::||||| |||| guACGU-GGUGUUAUUCUUGAAAUg 2 22 298 321 [mm9:11:118941885-118941908:-] 0.5796 123 0 -19.74 -0.8322 MIMAT0004760 mmu-miR-470* 12418 Cbx4 agAAGAGUCUUUCCAUG-ACCAa | ||| |: |||| |||| ucUACUCCGGUUUGUACGUGGUg 2 21 285 307 [mm9:11:118941899-118941921:-] 0.5796 120 0 -15.52 -0.7723 MIMAT0003186 mmu-miR-369-3p 12418 Cbx4 uuucuagUUGGUA-CAUAAUAa |:|:|| ||||||| gucucagAGCUAUAGUAUUAUa 2 15 233 254 [mm9:11:118941952-118941973:-] 0.5368 153 7 -9.87 -1.1229 MIMAT0003186 mmu-miR-369-3p 12418 Cbx4 uuucUAGUUGGUA-CAUA-AUAa | :|||| | |||| ||| caccAGUAACCUUGGUAUAUAUu 2 18 548 570 [mm9:11:118941636-118941658:-] 0.6033 120 0 -9.45 -0.7886 MIMAT0003731 mmu-miR-671-5p 12418 Cbx4 gaggucggggagguccCGAAGGa |||||| aaugucugaacuauaaGCUUCCa 2 8 665 687 [mm9:11:118941519-118941541:-] 0.6033 120 6 -11.42 -0.2741 MIMAT0003507 mmu-miR-500 12418 Cbx4 acuugggaacgggUCCACGUaa ||||||| auggagauguugaAGGUGCAa- 3 10 717 737 [mm9:11:118941469-118941489:-] 0.5806 125 0 -17.04 -0.1092 MIMAT0003509 mmu-miR-501-3p 12418 Cbx4 guuuaggaacgggcCCACGUaa |||||| auggagauguugaaGGUGCAa- 3 9 717 737 [mm9:11:118941469-118941489:-] 0.5806 120 0 -10.81 -0.1092 MIMAT0003510 mmu-miR-717 12418 Cbx4 ucucuuccauagagACAGACUc ||||||| ugcugcuauagaaaUGUCUGAa 2 9 653 674 [mm9:11:118941532-118941553:-] 0.6033 140 7 -11.44 -1.2158 MIMAT0003511 mmu-miR-450b-5p 12418 Cbx4 auaaguccuuguaugACGUUUu |||||| uguguuguuucuaugUGCAAAa 2 8 592 613 [mm9:11:118941593-118941614:-] 0.6033 120 6 -7.49 -0.2225 MIMAT0004839 mmu-miR-743b-5p 12418 Cbx4 acUACCUGUGGUCAGACUUGu || || |: |||||||| cuAUAGAAAU--GUCUGAACu 2 20 658 676 [mm9:11:118941530-118941548:-] 0.6033 152 7 -12.57 -0.8672 MIMAT0004844 mmu-miR-880 12418 Cbx4 agaUGAGUCUCUCCUACCUCAu || :||| ||||||| aaaACCUAGA-UUUAUGGAGUu 2 20 418 438 [mm9:11:118941768-118941788:-] 0.5817 145 7 -14.28 -1.0104 MIMAT0004898 mmu-miR-654-3p 12418 Cbx4 uucCACUACCAG---UCGUCUGUau || || || | |||||| cauGUUAUAUUCUAUAUCAGACAga 3 20 449 473 [mm9:11:118941733-118941757:-] 0.5817 126 0 -8.45 -0.1742 MIMAT0004932 mmu-miR-878-5p 12418 Cbx4 acagaacuguagguuGAUCUAu |||||| uugaaauauaaaaacCUAGAUu 2 8 408 429 [mm9:11:118941777-118941798:-] 0.5817 120 6 -8.33 -0.1485 MIMAT0004934 mmu-miR-872 12418 Cbx4 ggaCUUGA--UUGU--UCAUUGGAa ||||| :||| |||||||| cagGAACUGCGACACCAGUAACCUu 2 19 536 560 [mm9:11:118941646-118941670:-] 0.5718 160 7 -21.10 -0.5971 MIMAT0004861 mmu-miR-877 12418 Cbx4 ggGACGCGGUAGAGGAGAUg :| :| :|:||||||| auUUAUGGAGUUUCCUCUAg 2 19 427 446 [mm9:11:118941760-118941779:-] 0.5817 150 7 -16.92 -0.9296 MIMAT0005830 mmu-miR-466l 12418 Cbx4 uuAUACACACGUACAUAAAUAu | | | ||:| |||||||| uaUUUAUUUGUAGGUAUUUAUa 2 21 384 405 [mm9:11:118941801-118941822:-] 0.5817 164 7 -10.44 -1.1865 MIMAT0005830 mmu-miR-466l 12418 Cbx4 uuAUACACACGUACAUAAAUAu || | | :|| ||||||| uaUACAUAUAUAUAUAUUUAUu 2 21 370 391 [mm9:11:118941815-118941836:-] 0.5817 156 7 -4.32 -1.2174 MIMAT0005839 mmu-miR-669f 12418 Cbx4 uaugcacacacacauaCAUAUAc |||||| gacaccaguaaccuugGUAUAUa 2 8 546 568 [mm9:11:118941638-118941660:-] 0.6033 120 6 -5.44 -0.1482 MIMAT0005860 mmu-miR-1199 12418 Cbx4 ggCGC-GCUGGCCCUGAGUCu ||| | ||: |||||||| ucGCGCCCACUAGGACUCAGc 2 19 11 31 [mm9:11:118942175-118942195:-] 0.4768 161 7 -28.66 -0.3387 MIMAT0007872 mmu-miR-1906 12418 Cbx4 ucGGGACGGAGUCCGACGACGu |:|| |: | ||||||| agCUCU-CUAGAACCUGCUGCu 2 21 639 659 [mm9:11:118941547-118941567:-] 0.6033 146 7 -19.21 -0.7951 MIMAT0007876 mmu-miR-1907 12418 Cbx4 ugGAGGUCUAGGAGACGACGAg |||:||| | |||||||| cuCUCUAGAAC--CUGCUGCUa 2 21 641 660 [mm9:11:118941546-118941565:-] 0.6033 165 7 -25.61 -0.8125 MIMAT0009390 mmu-miR-1927 12418 Cbx4 agUCAGGGAU-UGUAGGUCUCCAg :| |:| : || | ||||||| uaGGACUCAGCACCUACAGAGGUu 2 22 21 44 [mm9:11:118942162-118942185:-] 0.4536 152 7 -20.84 -0.1917 MIMAT0009392 mmu-miR-1929 12418 Cbx4 gaGACGAGAUAUUUCAGGAUCUu :|| |||||| |||||| uaUUGAAAUAUAAAAACCUAGAu 2 22 406 428 [mm9:11:118941778-118941800:-] 0.5817 137 6 -16.18 -0.1168 MIMAT0009392 mmu-miR-1929 12418 Cbx4 gagacgaGAUAUUUC-AG-GAUCUu ||| |:|| || ||||| uaaaaggCUAAAGAGCUCUCUAGAa 2 17 626 650 [mm9:11:118941556-118941580:-] 0.6033 123 0 -14.75 -0.8193 MIMAT0009416 mmu-miR-1949 12418 Cbx4 uugauacGACUGUAGGACCAUAUc | | | |:||||||| gcgacacCAGUAACCUUGGUAUAu 2 18 544 567 [mm9:11:118941639-118941662:-] 0.6033 149 7 -13.44 -0.8603 MIMAT0009424 mmu-miR-1953 12418 Cbx4 gucuucggacucuuGAAAGGGu ||||||| uaaguuggccuuuuCUUUCCCc 2 9 480 501 [mm9:11:118941705-118941726:-] 0.5610 140 7 -17.78 -1.0493 MIMAT0009431 mmu-miR-1958 12418 Cbx4 ugaaugaCGAAGGUGAAAGGau || |:: |||||| uaaguugGCCUUUUCUUUCCcc 3 16 480 501 [mm9:11:118941705-118941726:-] 0.5610 131 0 -11.70 -0.1057 MIMAT0009431 mmu-miR-1958 12418 Cbx4 ugaaugacgaaggugAAAGGAu |||||| ccuagauuuauggagUUUCCUc 2 8 422 443 [mm9:11:118941763-118941784:-] 0.5817 120 6 -9.38 -0.1156 MIMAT0009445 mmu-miR-1274a 12418 Cbx4 accgcGGACUUGUCC-CUGGACu ||| |:||| |||||| ccuucCCU--AUAGGAGACCUGa 2 18 168 188 [mm9:11:118942018-118942038:-] 0.5368 122 6 -22.97 -0.1138 MIMAT0009457 mmu-miR-1839-3p 12418 Cbx4 cgacaaccaucUAUUCAUCCAga || |||||| uauauauauuuAUUUGUAGGUau 3 13 378 400 [mm9:11:118941806-118941828:-] 0.5817 124 0 -8.45 -0.4039 MIMAT0011222 mmu-miR-2146 12418 Cbx4 guguaccuuGGGAAGAGGUg |||||||||| uuuuauuucCCCUUCUCCAg 2 12 519 538 [mm9:11:118941668-118941687:-] 0.5718 155 7 -19.29 -0.2190 MIMAT0012772 mmu-miR-599 12418 Cbx4 caAACUAUUUGAC-UGUGUu ||||| |||| ||||| uuUUGAU--ACUGUACACAu 2 18 571 588 [mm9:11:118941618-118941635:-] 0.6033 126 0 -14.12 -0.4776 MIMAT0015646 mmu-miR-3474 12418 Cbx4 cuuAGGUGCAGAGG-AG-GGUCCc |::|: || || || ||||| gauUUUAUUUCCCCUUCUCCAGGa 2 20 517 540 [mm9:11:118941666-118941689:-] 0.5718 122 0 -16.62 -0.8836 MIMAT0000124 mmu-miR-15b 12418 Cbx4 acauuuGGUACUACACGACGAu |:| | ||||||| agcucuCUAGAACCUGCUGCUa 2 17 639 660 [mm9:11:118941546-118941567:-] 0.6033 144 7 -14.99 -0.8232 MIMAT0000124 mmu-miR-15b 12418 Cbx4 acauUUGGUACUACACGAC-GAu |||::| | |||||| || ugcuAACUGUCAAGUGCUGACUc 2 19 264 286 [mm9:11:118941920-118941942:-] 0.5368 130 0 -12.17 -0.6355 MIMAT0000132 mmu-miR-99b 12418 Cbx4 gcguuccaGCCAAG-AUGC-CCAc |||||: |||| ||| cucuacucCGGUUUGUACGUGGUg 2 15 284 307 [mm9:11:118941899-118941922:-] 0.5796 121 0 -21.30 -0.7686 MIMAT0000148 mmu-miR-136 12418 Cbx4 ggUAGUAGUU-UUGUUUACCUCa | ::| || | :|||||||| ugAAUGUAAAUAUUAAAUGGAGa 2 21 701 723 [mm9:11:118941483-118941505:-] 0.6033 155 7 -13.02 -1.2874 MIMAT0000156 mmu-miR-144 12418 Cbx4 ucAUGUAGUAGA-UAUGACAu ||:||: |:| ||||||| uaUAUAUUUUUUGAUACUGUa 2 19 563 583 [mm9:11:118941623-118941643:-] 0.6033 161 7 -13.42 -1.0314 MIMAT0000209 mmu-miR-129-5p 12418 Cbx4 cguucGGGUCUGGCGUUUUUc :|:| : :||||||| uuguuUCUAUG-UGCAAAAAa 2 17 596 615 [mm9:11:118941591-118941610:-] 0.6033 142 7 -7.99 -1.2715 MIMAT0000210 mmu-miR-181a 12418 Cbx4 ugAGUGGCUGUCGCAACUUACAa |:|:: | || |||||||| aaUUAUUACCUGC-UUGAAUGUa 2 22 687 708 [mm9:11:118941498-118941519:-] 0.6033 155 7 -14.88 -1.1762 MIMAT0000219 mmu-miR-24 12418 Cbx4 gacaaggacgaCUUGACUCGGu || ||||||| ucccuauaggaGACCUGAGCCu 2 12 171 192 [mm9:11:118942014-118942035:-] 0.5368 147 7 -17.18 -0.1725 MIMAT0000220 mmu-miR-190 12418 Cbx4 ugGAUUAUAUAGUUUGUAUAgu ||:|||||| | |||||| ggCUGAUAUAU-AUACAUAUau 3 21 360 380 [mm9:11:118941826-118941846:-] 0.5817 154 0 -15.50 -0.1818 MIMAT0000225 mmu-miR-195 12418 Cbx4 cgguuauaaagacACGACGAu ||||||| gcucucuagaaccUGCUGCUa 2 9 640 660 [mm9:11:118941546-118941566:-] 0.6033 140 7 -12.34 -0.8232 MIMAT0000233 mmu-miR-200b 12418 Cbx4 aguaguaauGGUCCGUCAUAAu :|| ||||||| cuuuccccuUCAUUCAGUAUUu 2 14 494 515 [mm9:11:118941691-118941712:-] 0.5610 145 7 -9.10 -1.1026 MIMAT0000366 mmu-miR-290-5p 12418 Cbx4 uuucacggggGUAUCAAACUCa :|| ||||||| ucuugaaaugUAUUGUUUGAGc 2 13 312 333 [mm9:11:118941873-118941894:-] 0.6020 148 7 -11.42 -0.8870 MIMAT0000369 mmu-miR-292-5p 12418 Cbx4 guuuucucggggguCAAACUCa ||||||| ucuugaaauguauuGUUUGAGc 2 9 312 333 [mm9:11:118941873-118941894:-] 0.6020 140 7 -8.61 -0.8802 MIMAT0000526 mmu-miR-15a 12418 Cbx4 guguuuGGUAAUACACGACGAu |:| | ||||||| agcucuCUAGAACCUGCUGCUa 2 17 639 660 [mm9:11:118941546-118941567:-] 0.6033 144 7 -14.86 -0.8232 MIMAT0000526 mmu-miR-15a 12418 Cbx4 guGUUUGGUAAUACACGAC-GAu | |||::| | |||||| || ugCUAACUGUCAAGUGCUGACUc 2 21 264 286 [mm9:11:118941920-118941942:-] 0.5368 132 0 -12.22 -0.6355 MIMAT0000527 mmu-miR-16 12418 Cbx4 gcgguuauaaaUGCACGACGAu || ||||||| agcucucuagaACCUGCUGCUa 2 12 639 660 [mm9:11:118941546-118941567:-] 0.6033 147 7 -15.06 -0.8232 MIMAT0000527 mmu-miR-16 12418 Cbx4 gcGGUUAUAAAUGCACGAC-GAu |:|| | | |||||| || ugCUAACUGUCAAGUGCUGACUc 2 21 264 286 [mm9:11:118941920-118941942:-] 0.5368 120 0 -15.43 -0.6392 MIMAT0000530 mmu-miR-21 12418 Cbx4 agUUGUAGUC-AGACUAUUCGAu ||::|| | || ||||||| gaAAUGUCUGAACU-AUAAGCUu 2 21 663 684 [mm9:11:118941522-118941543:-] 0.6033 153 7 -13.15 -0.8465 MIMAT0000539 mmu-miR-92a 12418 Cbx4 guccggccCUGUUCACGUUau || |:|||||| gagauguuGA-AGGUGCAA-- 3 14 720 737 [mm9:11:118941469-118941486:-] 0.5806 127 0 -10.76 -0.1125 MIMAT0000539 mmu-miR-92a 12418 Cbx4 guccggcccuGUUCACGUUau :| |||||| guguuguuucUAUGUGCAAaa 3 12 593 613 [mm9:11:118941593-118941613:-] 0.6033 123 0 -9.14 -0.1999 MIMAT0000548 mmu-miR-322 12418 Cbx4 agguuuuguaCUU-AACGACGAc ||| ||||||| gagcucucuaGAACCUGCUGCUa 2 13 638 660 [mm9:11:118941546-118941568:-] 0.6033 143 7 -14.69 -0.8232 MIMAT0000548 mmu-miR-322 12418 Cbx4 agGUUUUGUACUUAACGAC-GAc | || ::| || ||||| || ugCUAACUGUCAAGUGCUGACUc 2 21 264 286 [mm9:11:118941920-118941942:-] 0.5368 124 0 -8.95 -0.6355 MIMAT0000567 mmu-miR-329 12418 Cbx4 uuuuuccaaucgACCCACACAa ||||||||| auacuguacacaUGGGUGUGUu 2 11 576 597 [mm9:11:118941609-118941630:-] 0.6033 150 7 -17.74 -0.8242 MIMAT0004651 mmu-miR-340-5p 12418 Cbx4 uuagucagaguaacgAAAUAUu |||||| auuuauuuguagguaUUUAUAu 2 8 385 406 [mm9:11:118941800-118941821:-] 0.5817 120 6 -2.73 -0.1999 MIMAT0000652 mmu-miR-25 12418 Cbx4 agUCUGGCUCUGUUCACGUUac |||: || |:|||||| ggAGAUGUUGA-AGGUGCAA-- 3 21 719 737 [mm9:11:118941469-118941487:-] 0.5806 134 0 -12.44 -0.1114 MIMAT0000652 mmu-miR-25 12418 Cbx4 agucuggcucuGUUCACGUUac :| |||||| uguguuguuucUAUGUGCAAaa 3 12 592 613 [mm9:11:118941593-118941614:-] 0.6033 123 0 -7.96 -0.1999 MIMAT0000654 mmu-miR-32 12418 Cbx4 acguugaaucauUACACGUUau |||||||| uguguuguuucuAUGUGCAAaa 3 11 592 613 [mm9:11:118941593-118941614:-] 0.6033 130 0 -10.39 -0.1944 MIMAT0000654 mmu-miR-32 12418 Cbx4 acgUUGAAUCAUUACACGUUau :|: | | || |||||| ggaGAUGUUG-AAGGUGCAA-- 3 20 719 737 [mm9:11:118941469-118941487:-] 0.5806 129 0 -6.20 -0.1114 MIMAT0000657 mmu-miR-200c 12418 Cbx4 agguAGUAAUGGG----CCGUCAUAAu || || ||| ||||||| cuuuUCUUUCCCCUUCAUUCAGUAUUu 2 20 489 515 [mm9:11:118941691-118941717:-] 0.5610 142 7 -11.84 -1.1026 MIMAT0000661 mmu-miR-214 12418 Cbx4 ugacgGACAGA-CACGGACGACa || ||| | ||||||| aagagCUCUCUAGAACCUGCUGc 2 18 636 658 [mm9:11:118941548-118941570:-] 0.6033 152 7 -16.96 -0.9159 MIMAT0000661 mmu-miR-214 12418 Cbx4 ugACGGACAGACACGGACGAca | || |: | |||||| gcUUCCAAUUAUUACCUGCUug 3 21 681 702 [mm9:11:118941504-118941525:-] 0.6033 128 0 -12.86 -0.2021 MIMAT0000673 mmu-miR-181b 12418 Cbx4 ugGGUGGCUGUCGUUACUUACAa ::|:: | || ||||||| aaUUAUUACCUGC-UUGAAUGUa 2 22 687 708 [mm9:11:118941498-118941519:-] 0.6033 143 7 -13.33 -1.1762 MIMAT0000674 mmu-miR-181c 12418 Cbx4 ugAGUGGCUGUCCAACUUACAa |:|:: | | |||||||| aaUUAUUACCUGCUUGAAUGUa 2 21 687 708 [mm9:11:118941498-118941519:-] 0.6033 156 7 -12.49 -1.1762 MIMAT0004684 mmu-miR-362-3p 12418 Cbx4 acUUAGGA-ACUUGU--CCACACAa :|| || | ||| ||||||| uuGAUACUGUACACAUGGGUGUGUu 2 21 573 597 [mm9:11:118941609-118941633:-] 0.6033 150 7 -15.85 -0.8277 MIMAT0000708 mmu-miR-363 12418 Cbx4 augUCUACCUAUGGCACGUUaa ||||| | |||||| uggAGAUGUUGAAGGUGCAA-- 3 20 718 737 [mm9:11:118941469-118941488:-] 0.5806 135 0 -12.65 -0.1103 MIMAT0000708 mmu-miR-363 12418 Cbx4 augucuaccuAUGGCACGUUaa || :|||||| guguuguuucUA-UGUGCAAaa 3 13 593 613 [mm9:11:118941593-118941613:-] 0.6033 122 0 -8.25 -0.1944 MIMAT0001091 mmu-miR-410 12418 Cbx4 uguccggUAGACACAAUAUAa ||| |||||||| ccucuagAUC-AUGUUAUAUu 2 15 440 459 [mm9:11:118941747-118941766:-] 0.5817 148 7 -10.37 -0.8844 MIMAT0001091 mmu-miR-410 12418 Cbx4 uguccgguagacacAAUAUAa |||||| uuauuuguagguauUUAUAUa 2 8 387 407 [mm9:11:118941799-118941819:-] 0.5817 120 6 -6.25 -0.3863 MIMAT0001537 mmu-miR-429 12418 Cbx4 ugccguaauGGUCUGUCAUAAu :|| ||||||| cuuuccccuUCAUUCAGUAUUu 2 14 494 515 [mm9:11:118941691-118941712:-] 0.5610 145 7 -9.84 -1.1026 MIMAT0003168 mmu-miR-543 12418 Cbx4 uucuucacGUGG-CG--CUUACAaa :||| || |||||| ccaauuauUACCUGCUUGAAUGUaa 3 15 685 709 [mm9:11:118941497-118941521:-] 0.6033 124 0 -10.46 -0.2289 MIMAT0003172 mmu-miR-542-3p 12418 Cbx4 aaaGUCAAUAGUUA-GACA-GUGu :| || |::|| |||| ||| auaUAUUUUUUGAUACUGUACACa 2 20 564 587 [mm9:11:118941619-118941642:-] 0.6033 122 0 -10.16 -0.7866 MIMAT0003181 mmu-miR-367 12418 Cbx4 agugguaACGA-UUUCACGUUaa ||:| ||:|||||| auggagaUGUUGAAGGUGCAA-- 3 16 717 737 [mm9:11:118941469-118941489:-] 0.5806 138 0 -12.40 -0.1103 MIMAT0003181 mmu-miR-367 12418 Cbx4 agUGGUAACGAUUUCACGUUaa ::::|| || | |||||| guGUUGUUUCU-AUGUGCAAaa 3 21 593 613 [mm9:11:118941593-118941613:-] 0.6033 134 0 -10.41 -0.1908 MIMAT0003183 mmu-miR-376c 12418 Cbx4 ugCACUUUAAAGGAGAUACAa ||| :|| ::||||||| ggGUG-UGUUGUUUCUAUGUg 2 20 589 608 [mm9:11:118941598-118941617:-] 0.6033 153 7 -14.54 -0.9166 MIMAT0003727 mmu-miR-374 12418 Cbx4 guGAAUCGUCCA-A-CAUAAUAUa || || || | | |||||||| guCUCAG-AGCUAUAGUAUUAUAu 2 21 233 255 [mm9:11:118941951-118941973:-] 0.5368 152 7 -10.62 -0.6269 MIMAT0003727 mmu-miR-374 12418 Cbx4 guGAAUCGUCCAAC-AUA-AUAUa ||||| || || ||| |||| ccCUUAG--GGCUGAUAUAUAUAc 2 21 353 374 [mm9:11:118941832-118941853:-] 0.5817 124 0 -8.57 -1.0983 MIMAT0003893 mmu-miR-761 12418 Cbx4 acacagucaaagUGGGACGACg | ||||||| agagcucucuagAACCUGCUGc 2 11 637 658 [mm9:11:118941548-118941569:-] 0.6033 142 7 -17.91 -0.9289 MIMAT0003893 mmu-miR-761 12418 Cbx4 acacaGUCAA-AGUGGGACGAcg || || |:| |||||| gcuucCAAUUAUUA-CCUGCUug 3 18 681 702 [mm9:11:118941504-118941525:-] 0.6033 130 0 -11.74 -0.1827 MIMAT0003453 mmu-miR-497 12418 Cbx4 auguuuGGUGUCACACGACGAc |:| | ||||||| agcucuCUAGAACCUGCUGCUa 2 17 639 660 [mm9:11:118941546-118941567:-] 0.6033 144 7 -12.36 -0.8196 MIMAT0003453 mmu-miR-497 12418 Cbx4 auGUUUGGUGUCACACGAC-GAc | |||::: |||||| || ugCUAACUGUCAAGUGCUGACUc 2 21 264 286 [mm9:11:118941920-118941942:-] 0.5368 120 0 -12.88 -0.6392 MIMAT0003456 mmu-miR-495 12418 Cbx4 uucuucacguggUACAAACAAa | ||||||| gugcaaaaaaaaAAGUUUGUUa 2 11 606 627 [mm9:11:118941579-118941600:-] 0.6033 142 7 -9.44 -1.2882 MIMAT0004324 mmu-miR-181d 12418 Cbx4 uggguggcuguuguuACUUACAa ||||||| caauuauuaccugcuUGAAUGUa 2 9 686 708 [mm9:11:118941498-118941520:-] 0.6033 140 7 -12.23 -1.1762 MIMAT0004847 mmu-miR-882 12418 Cbx4 ugAUUACGCGAUUGAGA-GAGGa | | |:|||:||||| |||| ugUCAAGUGCUGACUCUACUCCg 2 21 271 293 [mm9:11:118941913-118941935:-] 0.5368 140 0 -25.33 -0.3349 MIMAT0004852 mmu-miR-190b 12418 Cbx4 uugGGUUAUA-GUUUGUAUAgu |::|||| :| |||||| gggCUGAUAUAUAUACAUAUau 3 19 359 380 [mm9:11:118941826-118941847:-] 0.5817 141 0 -9.92 -0.1870 MIMAT0004869 mmu-miR-421 12418 Cbx4 cgcGGGUUAAUUACAGAC-AACUa :||||||| | ||| |||| gcuUCCAAUUAUUACCUGCUUGAa 2 21 681 704 [mm9:11:118941502-118941525:-] 0.6033 136 0 -16.05 -1.1438 MIMAT0004895 mmu-miR-590-5p 12418 Cbx4 gacgugaAAAUACU---UAUUCGAg | | ||| ||||||| auagaaaUGUCUGAACUAUAAGCUu 2 16 660 684 [mm9:11:118941522-118941546:-] 0.6033 142 7 -11.61 -0.8769 MIMAT0004896 mmu-miR-590-3p 12418 Cbx4 ugauCGAAUAUGUAUUU-UAAu ||||: |::|||| ||| accuGCUUGAAUGUAAAUAUUa 2 18 694 715 [mm9:11:118941491-118941512:-] 0.6033 129 0 -9.16 -1.1186 MIMAT0004899 mmu-miR-92b 12418 Cbx4 ccuccggccCUGCUCACGUUau || | |||||| ggagauguuGAAG-GUGCAA-- 3 14 719 737 [mm9:11:118941469-118941487:-] 0.5806 123 0 -13.60 -0.1041 MIMAT0004899 mmu-miR-92b 12418 Cbx4 ccucCGGCCCUGCU-CACGUUau |::| | | |||||| guguGUUGUUUCUAUGUGCAAaa 3 19 591 613 [mm9:11:118941593-118941615:-] 0.6033 121 0 -8.45 -0.1999 MIMAT0004937 mmu-miR-875-5p 12418 Cbx4 guggacuauuuugacUCCAUAu |||||| uauauauuuauuuguAGGUAUu 2 8 380 401 [mm9:11:118941805-118941826:-] 0.5817 120 6 -8.65 -0.2651 MIMAT0005850 mmu-miR-1192 12418 Cbx4 uuaaaccagacaaaCAAACAAa ||||||| gugcaaaaaaaaaaGUUUGUUa 2 9 606 627 [mm9:11:118941579-118941600:-] 0.6033 140 7 -5.97 -1.2898

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G042126 Cbx4 Mus musculus 12418 19536157 0 0 R45249; MOUSE$CBX4_01; Binding factors: mmu-miR-26a-5p , mmu-miR-26b-5p // 0 0 R45251; MOUSE$CBX4_02; Binding factors: mmu-miR-15a-5p , mmu-miR-15b-5p , mmu-miR-16-5p , mmu-miR-195a-5p // 0 0 R45253; MOUSE$CBX4_03; Binding factors: mmu-miR-21a-5p , mmu-miR-590-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Cbx4 mmu-miR-223 beg:198 end:217 pic:3' ACCCCATAAACTG-----TTTGACTGT 5'& ||| .||||||| &5' ----------GACCACCAGAACTGAC- 3' Cbx4 mmu-miR-879 beg:1616 end:1633 pic:3' CCGAATCTCGATA--TTCGGAGA 5'& |||. ||||||| &5' --------GCTGGCAAAGCCTC- 3' Cbx4 mmu-miR-343 beg:2430 end:2440 pic:3' AGACCCGTGTACTTCCCTCT 5'& ||||||| &5' ------------AAGGGAG- 3' Cbx4 mmu-miR-129-3p beg:2485 end:2502 pic:3' TACGAAAAACCCCA-TTCCCGAA 5'& |||| |||||||| &5' ---------GGGGACAAGGGCTT 3' Cbx4 mmu-miR-136 beg:704 end:723 pic:3' GGTAGTAGTTTT--GTTTACCTCA 5'& .||| .|||||||| &5' -------TAAATATTAAATGGAG- 3' Cbx4 mmu-miR-877star beg:783 end:800 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||||| |||||||| &5' ------GAGGGA-AAGAGGAC- 3' Cbx4 mmu-miR-708 beg:887 end:905 pic:3' GGGTCGATCTAACATTCGAGGAA 5'& ||||| |||||||| &5' -----CTAGAGC---AGCTCCTT 3' Cbx4 mmu-miR-127star beg:1591 end:1609 pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& .|. |||||||||| &5' -------TCTGGTGAGCTTCAG 3' Cbx4 mmu-miR-18astar beg:1656 end:1675 pic:3' GTCTTC-CTCGTGAATCCCGTCA 5'& || || ||| ||||||| &5' ----AGTGA-CACC-AGGGCAG- 3' Cbx4 mmu-miR-448 beg:3265 end:3284 pic:3' TACCCTGTAG-GA-TGTATACGTT 5'& ||| || .|||||||| &5' -------ATCACTAGCATATGCA- 3' Cbx4 mmu-miR-103 beg:2177 end:2193 pic:3' AGTATCGGGACATGTTACGACGA 5'& ||| ||||||||| &5' ------CCCG----AATGCTGCT 3' Cbx4 mmu-miR-107 beg:2177 end:2193 pic:3' ACTATCGGGACATGTTACGACGA 5'& ||| ||||||||| &5' ------CCCG----AATGCTGCT 3' Cbx4 mmu-miR-3470b beg:1968 end:1988 pic:3' GGTCGGACCAGATGTCTCACT 5'& |||| || |||||||| &5' --AGCCCC--CTTCAGAGTGA 3' Cbx4 mmu-miR-1186 beg:2795 end:2815 pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |.|| |.| ||||||||. &5' ---GTCTCTGA--CCAGCACTT 3' Cbx4 mmu-miR-2861 beg:1557 end:1574 pic:3' GGCGGGCGGCG-GTCCGGGG 5'& ||. |||||||. &5' ------GCTAAACAGGCCCT 3' Cbx4 mmu-miR-2861 beg:64 end:84 pic:3' GGCGGGCGGCGGTCCGGGG 5'& ||| |. |||||||||. &5' -CGCG-GTGGCCAGGCCCT 3' Cbx4 mmu-miR-200c beg:497 end:515 pic:3' AGGTAGTAATGGGCCGTCATAAT 5'& || ||||| ||||||| &5' -CCTTCATT------CAGTATT- 3' Cbx4 mmu-miR-707 beg:2339 end:2356 pic:3' GCATCCGTTCGCCGTACTGAC 5'& ||.|.| ||||||| &5' ------CAGGTGCCATGACT- 3' Cbx4 mmu-miR-145star beg:1487 end:1504 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& | ||| ||||||| &5' ---GGCCAGG----CCAGGAA- 3' Cbx4 mmu-miR-145star beg:531 end:542 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||||||| &5' -------------TCCAGGAA- 3' Cbx4 mmu-miR-331-3p beg:747 end:765 pic:3' AAGATCCTATCCG-GGTCCCCG 5'& ||| || ||||||| &5' ------GATTAGCTCCAGGGG- 3' Cbx4 mmu-miR-1933-5p beg:2339 end:2356 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& | . |||||||| &5' ----------CAGGTGCCATGACT 3' Cbx4 mmu-miR-92astar beg:801 end:820 pic:3' CATTACGGTGGTTA-GGGGTGGA 5'& || |. ||||||| &5' ------CCTCTCTCACCCCACC- 3' Cbx4 mmu-miR-1943 beg:1136 end:1155 pic:3' AGGTCCACGGGTCTA-GGAGGGAA 5'& |||| ||||||| &5' -------GCCCTCAGCCCTCCCT- 3' Cbx4 mmu-miR-761 beg:1140 end:1160 pic:3' ACACAGTCAAAGTGGGACGACG 5'& |||| | ||||||||. &5' ----TCAGCC-CTCCCTGCTGT 3' Cbx4 mmu-miR-214 beg:1143 end:1160 pic:3' TGACGGACAGACACGGACGACA 5'& ||| || |||||||| &5' ---GCCC-TC----CCTGCTGT 3' Cbx4 mmu-miR-1195 beg:2820 end:2838 pic:3' ACTCGTCCGACCGGAGCTTGAGT 5'& |||||.| ||||||| &5' -------GCTGGTCACGAACTC- 3' Cbx4 mmu-miR-705 beg:1942 end:1965 pic:3' ACGGGTGGGGTGGA-GGGTGG 5'& |.|| .|||||. ||||.| &5' -GTCCCTCCCACTACCCCATC 3' Cbx4 mmu-miR-1904 beg:1970 end:1995 pic:3' GGAGGGAGGTCTC-CTCGTCTTG 5'& || ||||.||||| |||. ||| &5' CC-CCCTTCAGAGTGAGTTAAAC 3' Cbx4 mmu-miR-1897-5p beg:2730 end:2748 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |.|| |||| |.|||.| &5' ---CTTC---CTCC-TTCAAGG 3' Cbx4 mmu-miR-1904 beg:2733 end:2763 pic:3' GGAGGGAGGTCTCC------TCGTCTTG 5'& |||||.|| ||.|| .|||||| &5' CCTCCTTCAAGGGGCACTTGGGCAGAA- 3' Cbx4 mmu-miR-1897-5p beg:2897 end:2915 pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& ||| | ||||||||| &5' -CCCA-----CACCATCCAAA- 3' Cbx4 mmu-miR-325star beg:1405 end:1424 pic:3' TGTGAATGACTCGTGGATGATCC 5'& || .|.. |||||||| &5' -------CTTGGTGGCTACTAGG 3' Cbx4 mmu-miR-325star beg:2293 end:2311 pic:3' TGTGAATGACTCGTGGATGATCC 5'& ||| .. ||||||| &5' -------CTGGATGGCTACTAG- 3' Cbx4 mmu-miR-3099 beg:940 end:951 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& |||||||. &5' --------------CTAGCCTG 3' Cbx4 mmu-miR-674 beg:915 end:926 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& |||||||. &5' --------------CTCAGTGT 3' Cbx4 mmu-miR-665 beg:2771 end:2791 pic:3' TCCCTGGAGTCG-GAGGACCA 5'& |.|| |||| |||||||| &5' ---GGCC-CAGCTCTCCTGGT 3' Cbx4 mmu-miR-24 beg:179 end:192 pic:3' GACAAGGACGACTTGACTCGGT 5'& || ||||||| &5' -----------GACCTGAGCC- 3' Cbx4 mmu-miR-186star beg:348 end:363 pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& ||| ||||||||| &5' CCC----------CCTTAGGGC 3' Cbx4 mmu-miR-291b-5p beg:2509 end:2525 pic:3' CCTCTCCCGGAGGTGAAACTAG 5'& |. |.| ||||||| &5' -------GTGTTC-CTTTGAT- 3' Cbx4 mmu-miR-291a-5p beg:2509 end:2526 pic:3' TCTCTCCCGGAGGTGAAACTAC 5'& |. |.| |||||||| &5' -------GTGTTC-CTTTGATG 3' Cbx4 mmu-miR-130bstar beg:780 end:797 pic:3' TCATCACGTTGTCCCTTTCTCA 5'& |. |||||||||| &5' ------GTTG-AGGGAAAGAG- 3' Cbx4 mmu-miR-1199 beg:906 end:923 pic:3' GGCGCGCTGGCC-CTGAGTCT 5'& |. || ||||||| &5' ------GGAAGGTGACTCAG- 3' Cbx4 mmu-miR-715 beg:1794 end:1812 pic:3' GTGCGCCCCCACACGTGCCTC 5'& || ||||||||| &5' -----GGCTCGATGCACGGAG 3' Cbx4 mmu-miR-106b beg:2798 end:2817 pic:3' TAGACGTGACAGTCGTGAAAT 5'& |||| || |||||||||| &5' -TCTG-AC---CAGCACTTTA 3' Cbx4 mmu-miR-546 beg:1501 end:1511 pic:3' CTGAGGCACGGTGGTA 5'& ||||||| &5' --------GCCACCA- 3' Cbx4 mmu-miR-1198 beg:2121 end:2145 pic:3' GGTTCGGTCGGTCCTTGT-GTAT 5'& ||. ||||| ||||||| || &5' CCGTGCCAGGCAGGAACCTCA-- 3' Cbx4 mmu-miR-423-5p beg:1114 end:1133 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||.|| | | |||||||| &5' -----CTTGC-C-CCGCCCCTCA 3' Cbx4 mmu-miR-719 beg:2419 end:2431 pic:3' TTGTAAAAAGACATCGGCTCTA 5'& .|||||||| &5' -------------GGCCGAGAT 3' Cbx4 mmu-miR-688 beg:136 end:150 pic:3' CTTATTCATCAGCGGACGCT 5'& ||.|| ||||||| &5' ------GTGGT-GCCTGCG- 3' Cbx4 mmu-miR-207 beg:1429 end:1448 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& ||| | |.| ||||||| &5' -----AGGTGTGTCTGGAGAAG- 3' Cbx4 mmu-miR-453 beg:2051 end:2070 pic:3' ACGTTCGAGTGATACTCCGTTGGA 5'& || || ||||||| &5' ------CTTGCTTCT-GGCAACC- 3' Cbx4 mmu-miR-193b beg:1802 end:1822 pic:3' TCGC-CCTGAAACACCCGGTCAA 5'& || ||| || |||||||| &5' -GCACGGA----GT-GGCCAGTT 3' Cbx4 mmu-miR-764-3p beg:1566 end:1583 pic:3' TGTCAACGGTGATACCGGAGGA 5'& ||| ||. ||||||| &5' ------GCC-CTGGGGCCTCC- 3' Cbx4 mmu-miR-718 beg:2269 end:2287 pic:3' GCTGTGGGCCGGC-CCGCCTTC 5'& ||| | |||||||| &5' ------CCGAA-GAGGCGGAAG 3' Cbx4 mmu-miR-615-3p beg:1474 end:1492 pic:3' TTCTCCCTCTGGGTCCGAGCCT 5'& |||| .| ||||||| &5' ---AGGGGTGC---GGCTCGG- 3' Cbx4 mmu-miR-1894-5p beg:2250 end:2270 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& || |||||||| &5' ----GCCAAGCTT-GGGGAGAG 3' Cbx4 mghv-miR-M1-2 beg:873 end:884 pic:3' TTTCTCCCCCTCTCCCCCAGAC 5'& |||||||| &5' --------------GGGGTCTG 3' Cbx4 mmu-miR-2183 beg:2752 end:2772 pic:3' TCCTCCAGTC---CCCAAGTT 5'& .|| ||| |||||||. &5' ---GGG-CAGAAAGGGTTCAG 3' Cbx4 mmu-miR-1952 beg:2194 end:2212 pic:3' GTCTTCCTC-CCACCTCT 5'& |||| || ||||||| &5' CAGACCTAGAGGTGGAG- 3' Cbx4 mmu-miR-329 beg:1420 end:1439 pic:3' TTTTTCCAATCGACCCACACAA 5'& |..|||| ||| ||||||| &5' -AGGAGGT--GCTAGGTGTGT- 3' Cbx4 mmu-miR-362-3p beg:1420 end:1439 pic:3' ACTTAGGAACTTGTCCACACAA 5'& |.| || .|||||||| &5' -GGAGG--TGC-TAGGTGTGT- 3' Cbx4 mmu-miR-362-3p beg:584 end:598 pic:3' ACTTAGGAACTTGTCCACACAA 5'& |..|||||||| &5' -----------ATGGGTGTGTT 3' Cbx4 mmu-miR-329 beg:585 end:598 pic:3' TTTTTCCAATCGACCCACACAA 5'& |||||||||| &5' ------------TGGGTGTGTT 3' Cbx4 mmu-miR-1839-3p beg:2217 end:2229 pic:3' CGACAACCATCTATTCATCCAGA 5'& ||||||||| &5' --------------AGTAGGTCT 3' Cbx4 mmu-miR-7b beg:2309 end:2325 pic:3' TGTTGTTTTAGTGTTCAGAAGGT 5'& |||| |||||||| &5' ---------TCACTAGTCTTCC- 3' Cbx4 mmu-miR-1970 beg:1648 end:1667 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& .||||||| |||||||| &5' --GAGCCTAT----AGTGACAC- 3' Cbx4 mmu-miR-367 beg:721 end:740 pic:3' AGTGGTAACGATTT-CACGTTAA 5'& ||.|.|| |||||||| &5' -------TGTTGAAGGTGCAATT 3' Cbx4 mmu-miR-92a beg:722 end:739 pic:3' GTCCGGCCCTGTTCACGTTAT 5'& |..| |.||||||| &5' ---GTTGA---AGGTGCAAT- 3' Cbx4 mmu-miR-183 beg:2335 end:2353 pic:3' TCACTTAAGATGGTCACGGTAT 5'& ||||| .|||||||. &5' -------TCTACAGGTGCCATG 3' Cbx4 mmu-miR-770-5p beg:128 end:146 pic:3' GCACCGGGTCTGTGCACCACGA 5'& ||. |||||||||| &5' -----CCTTC-CACGTGGTGC- 3' Cbx4 mcmv-miR-m01-3 beg:2086 end:2107 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& |.| ||| ||| ||||||.| &5' TTG-GGCCT--GTC-CTTCACTG 3' Cbx4 mcmv-miR-m01-3 beg:890 end:910 pic:3' AGCTCCGTTGTCAGCGAAGTGGC 5'& || |||.| || |||||..| &5' --GA-GCAGC--TC-CTTCATTG 3' Cbx4 mcmv-miR-m21-1 beg:2594 end:2610 pic:3' GCCGAACTTGCACAGGGGATA 5'& ||..| |.||||| &5' -----TGGGCA--TTCCCTA- 3' Cbx4 mcmv-miR-m21-1 beg:183 end:200 pic:3' GCCGAACTTGCACAGGGGATA 5'& |||.| |.||||.| &5' -----TGAGCC--TTCCCTGT 3' Cbx4 mcmv-miR-m22-1 beg:1747 end:1767 pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& |.|| || .|||||| &5' -----TTGGGAAGGCTGGGGAA 3' Cbx4 mcmv-miR-M23-1-3p beg:2118 end:2139 pic:3' CCGGAGCCCGGCTGCGTCCTC 5'& |||| || ||| | |||||| &5' GGCC-CGTGCC-AGGCAGGA- 3' Cbx4 mcmv-miR-M23-2 beg:1124 end:1146 pic:3' GGCGAAC-TGGCTCCGGGGGTA 5'& || || .|| ||||.|| &5' CC-CTCAAGCCAA-GCCCTCA- 3' Cbx4 mcmv-miR-M44-1 beg:2711 end:2725 pic:3' TGGCGCCGAGACCTTTTTCTAT 5'& ||| ||.|||| &5' -----------GGACAAGGATA 3' Cbx4 mmu-miR-105 beg:2736 end:2757 pic:3' TGGT-GTTCGTAGACTCGTGAACC 5'& || |||| |.|||||||| &5' -CCTTCAAG-----GGGCACTTGG 3' Cbx4 mmu-miR-106bstar beg:906 end:928 pic:3' CGTCGTTCATGGGTGTCACGCC 5'& .| |.||. | |||||.|| &5' --GGAAGGTGA-CTCAGTGTGG 3' Cbx4 mmu-miR-1 beg:2879 end:2894 pic:3' TATGTATGAAGAAATGTAAGGT 5'& ||||.|||||.| &5' ----------CTTTGCATTCTA 3' Cbx4 mmu-miR-1186b beg:2535 end:2556 pic:3' CACCACGTACGG--AAATTAGGGT 5'& ||.. ||. ||||.|||| &5' ----TGTG-GCTTATTTAGTCCC- 3' Cbx4 mmu-miR-1188 beg:2886 end:2909 pic:3' AGGACCGGGT-TGGAGTGTGGT 5'& |.|| || ||| ||||||| &5' TTCTACA-CATACC-CACACCA 3' Cbx4 mmu-miR-1190 beg:1369 end:1381 pic:3' CTGTCTCCCCTTGGAGTCGACT 5'& |||.||||| &5' ------------CCTTAGCTG- 3' Cbx4 mmu-miR-1196 beg:1739 end:1759 pic:3' TCCGTCTCCGTCCATCTAAA 5'& .||||||| .|| ||. &5' GGGCAGAGTTGGGAAGG--- 3' Cbx4 mmu-miR-1199 beg:11 end:31 pic:3' GGCGCGC-TGGCCCTGAGTCT 5'& ||||| || |||||||| &5' -CGCGCCCACTAGGACTCAG- 3' Cbx4 mmu-miR-122 beg:3110 end:3130 pic:3' GTTTGTGGTAACAGT-GTGAGGT 5'& ||| ||| .|||||| &5' ------CCACAGTCTTTACTCCA 3' Cbx4 mmu-miR-1224 beg:1357 end:1377 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& ||||| |.| ||||.| &5' --CCACCCTCTCT-TCCTTA- 3' Cbx4 mmu-miR-1224 beg:523 end:546 pic:3' GAGGTGGAGGGGTCAG-GAGTG 5'& ||| |.||.|||| || .| &5' -TCCCCTTCTCCAGGAACT-GC 3' Cbx4 mmu-miR-124star beg:2003 end:2022 pic:3' TAGTTCCAGGCGAC--ACTTGTGC 5'& ||.|. |||||.| &5' -------TCTGTGTAATGAACGC- 3' Cbx4 mmu-miR-125a-3p beg:637 end:657 pic:3' CCGAGGGTTCTTGGAGTGGACA 5'& ||||.| ||||||| .|. &5' -GCTCTCTAGAACCT-GCT--- 3' Cbx4 mmu-miR-125a-5p beg:352 end:362 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& ||.|||| &5' ----------------CTTAGGG- 3' Cbx4 mmu-miR-125b-3p beg:636 end:657 pic:3' TCGAGGGTTCTCGGATTGGGCA 5'& |||||.| ||| ||| .|. &5' AGCTCTCTAGAACCT-GCT--- 3' Cbx4 mmu-miR-1274a beg:170 end:189 pic:3' ACCGCGGACTTGTCC-CTGGACT 5'& ||| |.||| ||||||| &5' -----CCT--ATAGGAGACCTGA 3' Cbx4 mmu-miR-1274a beg:2076 end:2098 pic:3' ACCGCGGACTTGTCCCTGGACT 5'& |||||. |||. ||.|||| &5' -GGCGCTAGAATT-GGGCCTG- 3' Cbx4 mmu-miR-128 beg:2503 end:2514 pic:3' TTTCTCTGGCCAAGTGACACT 5'& ||.|||||| &5' -----------TTTACTGTG- 3' Cbx4 mmu-miR-135astar beg:156 end:179 pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& ||||||| | || |||||||| &5' CGCCACGTC-CCCTTCCCTATA 3' Cbx4 mmu-miR-136 beg:1760 end:1776 pic:3' GGTAGTAGTTTTGTTTACCTCA 5'& ..|| |.|||||| &5' --------GGAAGAGATGGAG- 3' Cbx4 mmu-miR-138star beg:1806 end:1818 pic:3' GGGACCACAACACTTCATCGGC 5'& |.|||.||| &5' ------------GGAGTGGCC- 3' Cbx4 mmu-miR-139-5p beg:2370 end:2391 pic:3' GACCTCTGTGCACGTGACATCT 5'& ||| .|| | || ||||.|| &5' -TGGGTGCAGG-GC-CTGTGGA 3' Cbx4 mmu-miR-1 beg:559 end:586 pic:3' TATGTATGAAGAA--ATGTAAGGT 5'& .||.|||.||.|| ||| || &5' GTATATATTTTTTGATACTGTACA 3' Cbx4 mmu-miR-141star beg:2269 end:2290 pic:3' AGGTTGTGACGTGACCTTCTAC 5'& ||.| || |||||||| &5' -CCGAAGAGGC---GGAAGATG 3' Cbx4 mmu-miR-141star beg:893 end:917 pic:3' AGGTTGT-GACGTGACCTTCTAC 5'& ||.| || ||.||||||.|| &5' --CAGCTCCTTCATTGGAAGGTG 3' Cbx4 mmu-miR-142-3p beg:1064 end:1079 pic:3' AGGTATTTCATCCTTTGTGATGT 5'& || .||||.|| &5' -----------GGGGGCACTGCA 3' Cbx4 mmu-miR-144 beg:562 end:584 pic:3' TCATGTAGTAGA-TATGACAT 5'& ||.||. |.| |||||||| &5' --TATATTTTTTGATACTGTA 3' Cbx4 mmu-miR-145 beg:2349 end:2370 pic:3' TCCCTAAGGACCCTTTTGACCTG 5'& || |||| ||||.||||. &5' ---GACTCCTT-GAAAGCTGGG- 3' Cbx4 mmu-miR-145star beg:744 end:765 pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |.||| .|| ||||||.. &5' CGAGATTAGC---TCCAGGGG- 3' Cbx4 mmu-miR-146a beg:2595 end:2616 pic:3' TTGGGTACCT-TAAG---TCAAGAGT 5'& ||||. |||| ||||||. &5' -----ATGGGCATTCCCTAGTTCTT- 3' Cbx4 mmu-miR-146a beg:3217 end:3236 pic:3' TTGGGTACCTTAAG--TCAAGAGT 5'& |||||. .|||||.| &5' --------GAATTTAGGGTTCTTA 3' Cbx4 mmu-miR-146b beg:866 end:891 pic:3' TCGGATACCTTAAGTCA-AGAGT 5'& |||||.|||..| .|| |||| &5' AGCCTGTGGGGTCTGGTGTCTC- 3' Cbx4 mmu-miR-146b beg:3217 end:3236 pic:3' TCGGATACCTTAAG--TCAAGAGT 5'& |||||. .|||||.| &5' --------GAATTTAGGGTTCTTA 3' Cbx4 mmu-miR-146bstar beg:2989 end:3009 pic:3' TGGTCTTGACTCA-------GGGATCCCG 5'& |||| ||||.||| &5' ---------GAGTTCAAAGGCCCTGGGG- 3' Cbx4 mmu-miR-146bstar beg:980 end:1000 pic:3' TGGTCTTGACTCAGGGATCCCG 5'& .|| || |||||||.|||| &5' GCC----CT-AGTCCCTGGGGC 3' Cbx4 mmu-miR-146bstar beg:340 end:363 pic:3' TGGTCTTGACTCA-GGGATCCCG 5'& .|| .||| ||.|||||| &5' GCCC-GACTATCCCCCTTAGGGC 3' Cbx4 mmu-miR-147 beg:844 end:864 pic:3' ATCGTCTTCGTAAAGGCGTGTG 5'& ||| |||. |..||||| &5' -AGCT-AAGTC--TTTGCACA- 3' Cbx4 mmu-miR-150 beg:1311 end:1333 pic:3' GTGACCATGTTCCCAACCCTCT 5'& .||||| | | |||||||. &5' TACTGG-ATGAT--TTGGGAGG 3' Cbx4 mmu-miR-150 beg:1904 end:1920 pic:3' GTGACCATGTTCCC-AACCCTCT 5'& ||| ||||||| &5' ---------AAGCCTTTGGGAG- 3' Cbx4 mmu-miR-154 beg:541 end:560 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||.|||| .|||||| &5' -----GCGACACCAGTAACCT- 3' Cbx4 mmu-miR-155 beg:2521 end:2540 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& |.|| || ||||||. &5' -----TGTCCCATG-AGCATTG- 3' Cbx4 mmu-miR-15a beg:2172 end:2194 pic:3' GTGTTTGGTAATACACGACGAT 5'& ||||. |||||||. &5' ---AAACTCCCGAATGCTGCTG 3' Cbx4 mmu-miR-15a beg:645 end:661 pic:3' GTGTTTGGTAATACACGACGAT 5'& .|||| |||||||| &5' ---GAACC------TGCTGCTA 3' Cbx4 mmu-miR-15b beg:2172 end:2194 pic:3' ACATTTGGTACTACACGACGAT 5'& | ||||. |||||||. &5' -GAAAACTCCCGAATGCTGCTG 3' Cbx4 mmu-miR-15b beg:645 end:661 pic:3' ACATTTGGTACTACACGACGAT 5'& .|||| |||||||| &5' ---GAACC------TGCTGCTA 3' Cbx4 mmu-miR-15bstar beg:2404 end:2427 pic:3' ATCTCGTCGTTTATTACTAAGC 5'& |||| .|.|||||. |. || &5' -AGAG-GGTAAATAGAGGGCCG 3' Cbx4 mmu-miR-16 beg:647 end:661 pic:3' GCGGTTATAAATGCACGACGAT 5'& || |||||||| &5' -----------ACCTGCTGCTA 3' Cbx4 mmu-miR-17 beg:498 end:518 pic:3' GATGGACGTGACATTCGTGAAAC 5'& ||| ||.| ||.|.|||| &5' ---CCTTCATTC--AGTATTTTG 3' Cbx4 mmu-miR-181a beg:689 end:708 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& |.||| || |||||||| &5' --TTACCT---GC-TTGAATGT- 3' Cbx4 mmu-miR-181b beg:689 end:708 pic:3' TGGGTGGCTGTCGTTACTTACAA 5'& ..||| || ||||||| &5' --TTACCT---GCT-TGAATGT- 3' Cbx4 mmu-miR-181c beg:689 end:708 pic:3' TGAGTGGCTGTCCAACTTACAA 5'& |.||| .| |||||||| &5' --TTACCTGC---TTGAATGT- 3' Cbx4 mmu-miR-181d beg:691 end:708 pic:3' TGGGTGGCTGTTGTTACTTACAA 5'& ||| |. ||||||| &5' ACCTGCT--------TGAATGT- 3' Cbx4 mmu-miR-183 beg:3140 end:3155 pic:3' TCACTTAAGATGGTCACGGTAT 5'& | . |||.||| &5' --------CAGTTGGTGTCAT- 3' Cbx4 mmu-miR-1839-3p beg:3181 end:3196 pic:3' CGACAACCATCTATTCATCCAGA 5'& |||| ||.||||| &5' -----TGGT------GTGGGTCT 3' Cbx4 mmu-miR-185 beg:1235 end:1254 pic:3' AGTCCTTGACGGAA--AGAGAGGT 5'& ||||| ||||||| &5' -------CTGCCAGGCTCTCTCC- 3' Cbx4 mmu-miR-185 beg:484 end:500 pic:3' AGTCCTTGACGG-AAAGAGAGGT 5'& ||| |||||.||| &5' ---------GCCTTTTCTTTCC- 3' Cbx4 mmu-miR-188-3p beg:859 end:880 pic:3' ACGTTTGGGACGTACACCCTC 5'& |||.|| || ||||||. &5' --CAAGCCAAGCCTGTGGGG- 3' Cbx4 mmu-miR-188-3p beg:911 end:930 pic:3' ACGTTTGGGACGTACACCCTC 5'& | | |.| .||||||| &5' -GTGA-CTCA--GTGTGGGA- 3' Cbx4 mmu-miR-188-3p beg:2023 end:2046 pic:3' ACGTTTGGGACGTACACCCTC 5'& ||| ||||||.. |||| | &5' TGCC-ACCCTGTGAGTGGAGG 3' Cbx4 mmu-miR-188-5p beg:753 end:769 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& ||||| ..|||||| &5' --CTCCA------GGGGGATG 3' Cbx4 mmu-miR-188-5p beg:1714 end:1727 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& |||.|||.|| &5' -----------GCAGGGGGTG 3' Cbx4 mmu-miR-1894-5p beg:1861 end:1882 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |.|||.|| || |||||||. &5' -GGGGCGGG-GG-AGGGGAGG- 3' Cbx4 mmu-miR-1894-5p beg:947 end:970 pic:3' TCTCCGTC-CACCAT-CCCCTCTC 5'& || || |||| ||||.|| &5' ---GGAAGAGTGGAGTGGGGGGA- 3' Cbx4 mmu-miR-1896 beg:2395 end:2413 pic:3' GAGGAGTGGGTGGTAGTCTCTC 5'& .||| | .||||||.| &5' ------GCCC-CAGTCAGAGGG 3' Cbx4 mmu-miR-18astar beg:1726 end:1748 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& ||.| ||. | .|||||| &5' --GAGGTAGTTCGAGGGGCAG- 3' Cbx4 mmu-miR-1903 beg:1760 end:1783 pic:3' ACAGAGTCCTTCT-----TCTTCTTCC 5'& .|||||| |||.||||| &5' ------GGGAAGAGATGGAGAGGAAGG 3' Cbx4 mmu-miR-1904 beg:1733 end:1750 pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& |.| ||||.|||||. &5' ------TTC-GAGGGGCAGAG- 3' Cbx4 mmu-miR-1906 beg:637 end:659 pic:3' TCGGGACGGAGTCCGACGACGT 5'& |||.|| |. ||||||| &5' AGCTCT-CTAGAACCTGCTGC- 3' Cbx4 mmu-miR-1907 beg:639 end:660 pic:3' TGGAGGTCTAGGAGACGACGAG 5'& .|||.||| | |||||||| &5' -TCTCTAGAA-C-CTGCTGCT- 3' Cbx4 mmu-miR-1927 beg:24 end:45 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& |||| |||| |||||||. &5' TCAGCACCTA-----CAGAGGTT 3' Cbx4 mmu-miR-1927 beg:1462 end:1483 pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& .| |||||. |.||.||| &5' --GGCCCCTAGG--CTAGGGGT- 3' Cbx4 mmu-miR-1929 beg:411 end:428 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||||| |||||| &5' --------TATAAAAACCTAGA- 3' Cbx4 mmu-miR-1929 beg:2287 end:2301 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||| ||||.|| &5' ----GCTC-------TCCTGGA- 3' Cbx4 mmu-miR-1929 beg:938 end:954 pic:3' GAGACGAGATATTTCAGGATCTT 5'& |||| || |||.||| &5' ---TGCT------AG-CCTGGAA 3' Cbx4 mmu-miR-1929 beg:2307 end:2330 pic:3' GAGACGAGATATTTC-AGGATCTT 5'& |.|| ||. ||||.||| &5' ----GTTCACTAGTCTTCCTGGAA 3' Cbx4 mmu-miR-1930 beg:1044 end:1072 pic:3' TGCGACGTC-CA-TGA----TACCTCCA 5'& |.||.|| | .| ||||.|| &5' --GTTGTAGAGGGGCGAGAAATGGGGG- 3' Cbx4 mmu-miR-1931 beg:2876 end:2890 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& || |.|||||| &5' -----------AGGCTTTGCAT 3' Cbx4 mmu-miR-1931 beg:845 end:862 pic:3' CGGTAGCGTGGTCGGGAACGTA 5'& || ||.|.||||| &5' ------GCTA-AGTCTTTGCA- 3' Cbx4 mmu-miR-1933-3p beg:2579 end:2596 pic:3' TATCAGTGT-GACTACCAGGACC 5'& || . |||| |||.||| &5' -----CAGGTCTGA-GGTTCTG- 3' Cbx4 mmu-miR-1934 beg:2179 end:2200 pic:3' TCTCCTGCTT-CGTCCCCTGGTCT 5'& |||| || | ||.|||| &5' ------CGAATGCTGCTGATCAGA 3' Cbx4 mmu-miR-1934 beg:2966 end:2985 pic:3' TCTCCTGCTTCGTCCC-CTGGTCT 5'& |.||| | |.||||| &5' --------AGGCACAGAGGCCAGA 3' Cbx4 mmu-miR-1934 beg:1861 end:1883 pic:3' TCTCCTGCTTCGTCCCCTGGTCT 5'& .||.||..| |||||| || &5' --GGGGCGGGGGAGGGGAGGAG- 3' Cbx4 mmu-miR-1935 beg:2656 end:2678 pic:3' TCTCT-AGGCGGTCG-GAGACGGA 5'& |||. ||| |||| ||||||| &5' -GAGGCTCC-CCAGGACTCTGCC- 3' Cbx4 mmu-miR-1937c beg:1748 end:1766 pic:3' ACCC--CCGAGAAGGCCCTA 5'& |||| |||| |||| &5' TGGGAAGGCTG----GGGA- 3' Cbx4 mmu-miR-193star beg:2452 end:2473 pic:3' AGTAGAACGGG----CGTTTCTGGGT 5'& |||. |. ||||||| &5' -------GCCTGGTTGTCAAGACCC- 3' Cbx4 mmu-miR-193star beg:2982 end:3004 pic:3' AGTAGAACGGGC-----GTTTCTGGGT 5'& ||. |||||.||| &5' -------GCTAGGAGTTCAAAGGCCC- 3' Cbx4 mmu-miR-193star beg:329 end:345 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& ||.| .|||.||| &5' -------GCTCA-GAAGGCCC- 3' Cbx4 mmu-miR-193star beg:820 end:842 pic:3' AGTAGAACGG-GCG----TTTCTGGGT 5'& |.| ||. ||||||.| &5' -------GTCACGTGGAAAAAGACTC- 3' Cbx4 mmu-miR-193star beg:3083 end:3105 pic:3' AGTAGAA-CGGGCGTTTCTGGGT 5'& ||| |..| .||||.||| &5' ----CTTAGTTCCAGAAGATCCA 3' Cbx4 mmu-miR-1940 beg:2084 end:2105 pic:3' TTGACGAGGTGGAAGAGTCAGGAGGTA 5'& ||.|| .||| |||||.|| &5' AATTGG---GCCT-----GTCCTTCA- 3' Cbx4 mmu-miR-1941-3p beg:1717 end:1734 pic:3' TACCCTCTATGACGATTCTAC 5'& |||.| ||||.||.| &5' --GGGGG----TGCTGAGGT- 3' Cbx4 mmu-miR-1943 beg:1351 end:1372 pic:3' AGGTCC-ACGGGTCTAGGAGGGAA 5'& | | |||| ||||.||| &5' -CTGGCCTGCCAC---CCTCTCTT 3' Cbx4 mmu-miR-1944 beg:1794 end:1812 pic:3' TTAGTCTTGAACTGTAAGTCGTGTCTC 5'& |.| ||||.||| &5' -----------GGCTCGATGCACGGAG 3' Cbx4 mmu-miR-1946b beg:2054 end:2082 pic:3' TTTTCGT--ACACGGTGGT--GACGGGCCG 5'& || || || |||. ||||.|||| &5' ----GCTTCTG-GCAACCGGCCTGCTCGGC 3' Cbx4 mmu-miR-1948 beg:693 end:705 pic:3' GACATGCTCACGAGACGGATTT 5'& ||||.|.|| &5' -------------CTGCTTGAA 3' Cbx4 mmu-miR-1948 beg:934 end:953 pic:3' GACATGCT-CACGAGACGGATTT 5'& || ||||| ||||..| &5' ------GAGGTGCTA-GCCTGGA 3' Cbx4 mmu-miR-1949 beg:2777 end:2795 pic:3' TTGATACGACTGTAGGACCATATC 5'& ||| |||||||.|.| &5' ------GCTC---TCCTGGTGTGG 3' Cbx4 mmu-miR-1949 beg:3173 end:3191 pic:3' TTGATACGACTGTAGGACCATATC 5'& |||| .|| ||||.|.| &5' ----ATGCA-GCA---TGGTGTGG 3' Cbx4 mmu-miR-1950 beg:3162 end:3182 pic:3' ACTGGTATAGGAA-TCTACGTCT 5'& ||.||| |||||||| &5' -----ATGTCCCACAGATGCAG- 3' Cbx4 mmu-miR-195 beg:650 end:661 pic:3' CGGTTATAAAGACACGACGAT 5'& |||||||| &5' -------------TGCTGCTA 3' Cbx4 mmu-miR-1952 beg:950 end:970 pic:3' GTCTT-CCTC-CCACCTCT 5'& |||. |||| || ||.|| &5' -AGAGTGGAGTGG-GGGGA 3' Cbx4 mmu-miR-1953 beg:479 end:501 pic:3' GTCT-TCGGACTCTTGAAAGGGT 5'& || .|||| ||||||| &5' -AGTTGGCCTTTT--CTTTCCC- 3' Cbx4 mmu-miR-1953 beg:2141 end:2159 pic:3' GTCTTCGGACTCTTGAAAGGGT 5'& |||| .||||.||| &5' ----AGCCCCT--GCTTTTCCA 3' Cbx4 mmu-miR-1954 beg:1510 end:1532 pic:3' TTGTC-CCAGA-GTGAGACGTCA 5'& ||| || | .||||||| &5' --CAGCGGCCAGCTTTCTGCAG- 3' Cbx4 mmu-miR-1955 beg:80 end:101 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& .||| | |||||||. &5' -----TTGCTCA-CTCCCTGGGAT- 3' Cbx4 mmu-miR-1955 beg:1556 end:1579 pic:3' TTTTCGAC--GTCACGTAGGACCCTGA 5'& .||| ||| || ||||||.| &5' ---GGCTAAACAG-GC--CCTGGGGC- 3' Cbx4 mmu-miR-1956 beg:2283 end:2302 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& | ||.||| .||||||. &5' ---GATGGCTC--TCCTGGAT- 3' Cbx4 mmu-miR-1957 beg:449 end:468 pic:3' CAGTATACGAGATGGTGAC 5'& ||.|||| || ||.|| &5' GTTATATTCTATATCA--- 3' Cbx4 mmu-miR-1960 beg:1373 end:1397 pic:3' TCGGGAGAAGATTG-TCGTGACC 5'& |||. | ..| .||||||| &5' AGCTG-CGTG-GGCTGGCACTGG 3' Cbx4 mmu-miR-1962 beg:1508 end:1526 pic:3' TACACAGGGTCA-CGGTCGGAGA 5'& |||| ||||||.|. &5' -------CCAGCGGCCAGCTTT- 3' Cbx4 mmu-miR-1967 beg:1600 end:1616 pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& |..||||||.||| &5' ---------CTTCAGGATTCTC- 3' Cbx4 mmu-miR-1970 beg:2558 end:2582 pic:3' GTTTCGGATAGGGGTCACTGTGT 5'& |.||| . |.| |||||||| &5' --AGGCCAGCTCTCTGTGACACA 3' Cbx4 mmu-miR-1971 beg:839 end:861 pic:3' AGAG---TCGGGTCGGAAATG 5'& |||| |||. ||.||||.| &5' TCTCTAAAGCTAAGTCTTTGC 3' Cbx4 mmu-miR-1971 beg:2138 end:2159 pic:3' AGAGTCGGGT-CGGAAATG 5'& |||||||| ||.||| | &5' -CTCAGCCCCTGCTTTTCC 3' Cbx4 mmu-miR-1981 beg:1906 end:1937 pic:3' CGGTG-----CAGAT-TC-GGGTCGGAAATG 5'& ||| ||.|. || |||.||.|||. &5' GCCTTTGGGAGTTTGTAGCCCCGGCTTTTG- 3' Cbx4 mmu-miR-1981 beg:1891 end:1915 pic:3' CGGTGCAGATTCGGG-TCGGAAATG 5'& ||.| |.| | |||||||. &5' -CCGCTTTTTTGAAAAAGCCTTTG- 3' Cbx4 mmu-miR-1981 beg:3103 end:3126 pic:3' CGGTGCAGATTCGG-GTCGGAAATG 5'& ||.|| || |||.|||||| &5' -----GTTTATCCCACAGTCTTTAC 3' Cbx4 mmu-miR-1982star beg:2658 end:2679 pic:3' GGAGGGGTCCTGGGA-GGGTT 5'& |||||||||||.|| ||| &5' -CTCCCCAGGACTCTGCCC-- 3' Cbx4 mmu-miR-199a-3p beg:1282 end:1303 pic:3' ATTGGTTACACGTCTGATGACA 5'& .| ||| ||| |||.|||| &5' -GAGCAA-GTGA--ACTGCTGT 3' Cbx4 mmu-miR-199b beg:1282 end:1303 pic:3' ATTGGTTACACGTCTGATGACA 5'& .| ||| ||| |||.|||| &5' -GAGCAA-GTGA--ACTGCTGT 3' Cbx4 mmu-miR-19a beg:845 end:864 pic:3' AGTCAAAACGTATCT-AAACGTGT 5'& || || |||||||| &5' --------GCTAAGTCTTTGCACA 3' Cbx4 mmu-miR-19b beg:2877 end:2890 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& || ||||||. &5' ------------GGCTTTGCAT- 3' Cbx4 mmu-miR-19b beg:845 end:864 pic:3' AGTCAAAACGTA-CCTAAACGTGT 5'& || | |||||||| &5' --------GCTAAGTCTTTGCACA 3' Cbx4 mmu-miR-200b beg:233 end:253 pic:3' AGTAGTAATGGTCCGTCATAAT 5'& ||| .|.| .||||||| &5' ---TCAGAGCTA--TAGTATTA 3' Cbx4 mmu-miR-200c beg:233 end:253 pic:3' AGGTAGTAATGGGCCGTCATAAT 5'& ||| .|. .||||||| &5' ----TCAGAGCTA--TAGTATTA 3' Cbx4 mmu-miR-201 beg:1334 end:1352 pic:3' TTCTTGTTACGGAATGACTCAT 5'& .|||. || .|||||| &5' ---GACAGGGC---GCTGAGT- 3' Cbx4 mmu-miR-202-5p beg:2699 end:2717 pic:3' TTTCTTCATATACGTATCCTT 5'& |||.| .||||| &5' --AGAGGACAA---GTAGGA- 3' Cbx4 mmu-miR-203star beg:184 end:207 pic:3' ACAACTTGACAGTT---CTTGGTGA 5'& |||.| || |.||||| &5' ---TGAGCCTTCCCTGTGGACCAC- 3' Cbx4 mmu-miR-204 beg:1430 end:1452 pic:3' TCCGTATCCTACTGTTTCCCTT 5'& |||..| | || .||||||| &5' AGGTGT-GTCTGGAGAAGGGAA 3' Cbx4 mmu-miR-204 beg:1867 end:1893 pic:3' TCCGTATCCTACTGT-TTCCCTT 5'& .|| | .||| || . ||||||| &5' GGGGAGGGGAGGAGGGAAGGGAA 3' Cbx4 mmu-miR-204 beg:777 end:793 pic:3' TCCGTATCCTACTGT--TTCCCTT 5'& || .|||||| &5' -----------GAAGTTGAGGGAA 3' Cbx4 mmu-miR-205 beg:2027 end:2047 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& || || || ||.||.|||| &5' ---AC-CCTGT-GAGTGGAGGA 3' Cbx4 mmu-miR-205 beg:771 end:792 pic:3' GTCTGAGGCCACCTTACTTCCT 5'& ||. |||| |||.||| &5' -AGG-TCCGAAGT--TGAGGGA 3' Cbx4 mmu-miR-207 beg:1866 end:1891 pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |.||||||.||| .||| .| &5' GGGGGAGGGGAGGAGGGAAGGG- 3' Cbx4 mmu-miR-207 beg:1753 end:1779 pic:3' CTCC--CTCC-TCTCGGTCCTCTTCG 5'& ||| |.|| |||| |||||.| &5' -AGGCTGGGGAAGAGAT-GGAGAGG- 3' Cbx4 mmu-miR-20a beg:497 end:518 pic:3' GATGGACGTGATATTCGTGAAAT 5'& ||| ||.| ||.|.|||. &5' ---CCTTCATTC--AGTATTTTG 3' Cbx4 mmu-miR-211 beg:1867 end:1893 pic:3' TCCGTTTCCTACTGT-TTCCCTT 5'& .|| |..||| || . ||||||| &5' GGGGAGGGGAGGAGGGAAGGGAA 3' Cbx4 mmu-miR-211 beg:1429 end:1452 pic:3' TCCGTTTCCTACTGTTTCCCTT 5'& |||.. | || .||||||| &5' AGGTGT-GTCTGGAGAAGGGAA 3' Cbx4 mmu-miR-211 beg:777 end:793 pic:3' TCCGTTTCCTACTGT--TTCCCTT 5'& || .|||||| &5' -----------GAAGTTGAGGGAA 3' Cbx4 mmu-miR-2134 beg:30 end:52 pic:3' CGTGGGG--CA--AAGGGTTCTG 5'& ||||. | ||||||||. &5' -CACCTACAGAGGTTCCCAAGG- 3' Cbx4 mmu-miR-2135 beg:1565 end:1582 pic:3' CAAAGCCGGGGTTCTGGAGA 5'& ||||| .|.|||| &5' -----GGCCCTGGGGCCTC- 3' Cbx4 mmu-miR-2135 beg:2717 end:2737 pic:3' CAAAGCCGGGGT---TCTGGAGA 5'& || ||||.|| &5' -----GGATAGAAACAGACTTC- 3' Cbx4 mmu-miR-2135 beg:2669 end:2690 pic:3' CAAAGCCGGGGT--TCTGGAGA 5'& || ||||. ||.|||| &5' ---TCTGCCCTCTCAGGCCTC- 3' Cbx4 mmu-miR-2137 beg:1567 end:1590 pic:3' GAGGGACCCC-GAGGGCGG-CCG 5'& |||||||| |||| ||| || &5' --CCCTGGGGCCTCCGGCCTGG- 3' Cbx4 mmu-miR-2137 beg:1187 end:1209 pic:3' GAGGGACCCCGAGGGCGGCCG 5'& |||..||||||| .| |||| &5' CTCTTTGGGGCTGTC-CCGG- 3' Cbx4 mmu-miR-2140 beg:200 end:219 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||||| ||| ||| || &5' ACCACC-AGAACTGACCC- 3' Cbx4 mmu-miR-214 beg:637 end:658 pic:3' TGACGGACAGA-CACGGACGACA 5'& ||. ||| | ||||||| &5' ---GCTC-TCTAGAACCTGCTG- 3' Cbx4 mmu-miR-2146 beg:525 end:538 pic:3' GTGTACCTTGGGAAGAGGTG 5'& |||||||||| &5' ---------CCCTTCTCCA- 3' Cbx4 mmu-miR-214star beg:2575 end:2603 pic:3' CGTGTC---GTTCACAT--CTGTCCGT 5'& ||||| ..|| || ||..|||| &5' -CACAGGTCTGAG-GTTCTGATGGGCA 3' Cbx4 mmu-miR-216a beg:737 end:755 pic:3' AGTGTCAACGGTCGACTCTAAT 5'& ||| ||.| ||||||| &5' ---CAG-TGTCC---GAGATTA 3' Cbx4 mmu-miR-218 beg:2964 end:2977 pic:3' TGTACCAATCTAGTTCGTGTT 5'& |||.|||||. &5' -----------TCAGGCACAG 3' Cbx4 mmu-miR-23b beg:301 end:323 pic:3' CCAT--TAGGGACCGTTACACTA 5'& |||. ||.|.|| ||||| &5' GGTGTTATTCTTGA-AATGT--- 3' Cbx4 mmu-miR-24 beg:1149 end:1166 pic:3' GACAAGGACGACTTGACTCGGT 5'& ||||||| ||.|||| &5' -----CCTGCTG---TGGGCCA 3' Cbx4 mmu-miR-24 beg:1288 end:1311 pic:3' GACAAG-GACGACTTGACTCGGT 5'& || |||||| .||.||| &5' --GTGAACTGCTGTGTTGGGCC- 3' Cbx4 mmu-miR-25 beg:1998 end:2017 pic:3' AGTCTGGCTCTGTTCACGTTAC 5'& || |||.|||| &5' -----CCCCCTCT-GTGTAATG 3' Cbx4 mmu-miR-26bstar beg:2700 end:2726 pic:3' CTCG-GTTCATTACC-TCTTGTCC 5'& ||| ||||||. ||.|.|| &5' GAGGACAAGTAGGACAAGGATAG- 3' Cbx4 mmu-miR-26bstar beg:779 end:802 pic:3' CTCGGTTCATTACCTCTTGTCC 5'& ||. || | |||.||.| &5' -AGTTGAGGGAAAGAGGACGG- 3' Cbx4 mmu-miR-27a beg:2559 end:2578 pic:3' CGCCTTGAATCGGT-----GACACTT 5'& .|||| |||||| &5' ---------GGCCAGCTCTCTGTGA- 3' Cbx4 mmu-miR-27a beg:179 end:203 pic:3' CGCCTTGAA-TCGGT---GACACTT 5'& | || |||| |||||.| &5' --GAGACCTGAGCCTTCCCTGTGGA 3' Cbx4 mmu-miR-28 beg:884 end:905 pic:3' GAGTTATCTGACACTCGAGGAA 5'& || |||| |||||||| &5' -TCTCTAGAGC---AGCTCCTT 3' Cbx4 mmu-miR-2861 beg:2670 end:2690 pic:3' GGCGGGCGGCGGTCCGGGG 5'& |.|||| .| .||||||.| &5' CTGCCC-TC-TCAGGCCTC 3' Cbx4 mmu-miR-292-3p beg:2734 end:2755 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& ||| | || ||||||| &5' ---CTCCTT-CAAGG-GGCACTT- 3' Cbx4 mmu-miR-293star beg:313 end:333 pic:3' GTTTTACAGTGTGTCAAACTCA 5'& .|||||| ||||||| &5' -GAAATGTATT---GTTTGAG- 3' Cbx4 mmu-miR-296-3p beg:1130 end:1152 pic:3' CCTCTCGGA--GGTGGGTTGGGAG 5'& |||| || |.||.||||| &5' ----AGCCAAGCC-CTCAGCCCTC 3' Cbx4 mmu-miR-296-3p beg:1173 end:1195 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& .|||. | ||||||.||. &5' --GGAGTAGAC-CCCAACTCTT 3' Cbx4 mmu-miR-297a beg:356 end:377 pic:3' TGTACGTGTAC-GTGTGTATGTA 5'& | .| || .|.|.|||||| &5' ----GGGC-TGATATATATACAT 3' Cbx4 mmu-miR-297astar beg:1694 end:1717 pic:3' ATACCCATACACACATACATAT 5'& |.|| || |||||||.|||. &5' TGTGTGTTTGTGTGTGTGTG-- 3' Cbx4 mmu-miR-297b-3p beg:1694 end:1717 pic:3' ATACCCATACACACATACATAT 5'& |.|| || |||||||.|||. &5' TGTGTGTTTGTGTGTGTGTG-- 3' Cbx4 mmu-miR-297b-5p beg:356 end:377 pic:3' TGTACAAGTAC-GTGTGTATGTA 5'& | | || .|.|.|||||| &5' ----GGGC-TGATATATATACAT 3' Cbx4 mmu-miR-297c beg:358 end:383 pic:3' TGTAC-ATGTACGTGTGTATGTA 5'& .| || ||.|| .|||.|||.|| &5' GC-TGATATATATACATATATAT 3' Cbx4 mmu-miR-297cstar beg:1694 end:1717 pic:3' ATACCCATACACACATACATAT 5'& |.|| || |||||||.|||. &5' TGTGTGTTTGTGTGTGTGTG-- 3' Cbx4 mmu-miR-298 beg:1220 end:1243 pic:3' CCCTTCTTGTCGGGAGGAGACGG 5'& ||.||| ||.|.||||||| &5' --GAGGAAAC-CCTTTCTCTGCC 3' Cbx4 mmu-miR-299 beg:2942 end:2959 pic:3' TTCGCCAAATGGC-AGGGTGTAT 5'& |||| ||..||||. &5' ---------ACCGTTCTTACATG 3' Cbx4 mmu-miR-29a beg:928 end:946 pic:3' ATTGGCTAAAGTCTACCACGAT 5'& ||.||| || ||||||| &5' -AATCGA-----GA-GGTGCTA 3' Cbx4 mmu-miR-29b beg:1422 end:1432 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& ||||||| &5' ----------------GGTGCTA 3' Cbx4 mmu-miR-29b beg:930 end:946 pic:3' TTGTGACTAAAGTTTACCACGAT 5'& ||.|. ||||||| &5' ----------TCGAGAGGTGCTA 3' Cbx4 mmu-miR-29bstar beg:2550 end:2569 pic:3' ATTTGGTGGTATACTTTGGTCG 5'& || ||| .| |..||||| &5' ----CC-CCAAGT-AGGCCAGC 3' Cbx4 mmu-miR-29c beg:1422 end:1432 pic:3' ATTGGCTAAAGTTTACCACGAT 5'& ||||||| &5' ---------------GGTGCTA 3' Cbx4 mmu-miR-300 beg:2868 end:2890 pic:3' CTTCTCTCGAACGGGAACGTAT 5'& ||| || | | |.|||||| &5' GAAAAG-GAA-GGCTTTGCAT- 3' Cbx4 mmu-miR-302a beg:2734 end:2755 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& | || || || .||||||. &5' -CTCCTT--CAAGG-GGCACTTG 3' Cbx4 mmu-miR-302c beg:1057 end:1076 pic:3' GGTGACTTTGTACCTTCGTGAA 5'& ||.| ||||..||||| &5' -----GAGAAATGGGGGCACT- 3' Cbx4 mmu-miR-3072 beg:1315 end:1337 pic:3' TCTTCCG---AAGGACCTCCCCCGT 5'& || ||. ||||||||| &5' ----GGATGATTTG-GGAGGGGGC- 3' Cbx4 mmu-miR-3072star beg:2730 end:2755 pic:3' GGACGGGAGGGAG--CCCCAGGGA 5'& || .|||||.|| |||| |.| &5' -CT-TCCTCCTTCAAGGGGCACTT 3' Cbx4 mmu-miR-3099star beg:2037 end:2052 pic:3' GTTCCCGACCTTCCTTCGACC 5'& ||| ||||.|||| &5' -------TGG-AGGAGGCTG- 3' Cbx4 mmu-miR-30c-1star beg:1935 end:1955 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& ||.||. .|| |||||| &5' ---GTGAATCGTCC-CTCCCA- 3' Cbx4 mmu-miR-30c-1star beg:791 end:813 pic:3' CCTCATTTG-TTGGGAGAGGGTC 5'& ||| .|| .||||||||.|| &5' -GAG--GACGGACCCTCTCTCA- 3' Cbx4 mmu-miR-30c-2star beg:33 end:49 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& |||| .||||| &5' -------ACAGAGG-TTCCCA- 3' Cbx4 mmu-miR-30c-2star beg:1935 end:1955 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ||.||. |.| |||||| &5' ---GTGAATCGTCC-CTCCCA- 3' Cbx4 mmu-miR-30c-2star beg:2140 end:2159 pic:3' TCTCATTTGTCGGA----AGAGGGTC 5'& ||||| |.|.|||| &5' --------CAGCCCCTGCTTTTCCAG 3' Cbx4 mmu-miR-30c-2star beg:790 end:813 pic:3' TCTCATTTGTC-GGAAGAGGGTC 5'& |||| .||.| || ||||.|| &5' AGAG--GACGGACCCTCTCTCA- 3' Cbx4 mmu-miR-30estar beg:2307 end:2330 pic:3' CGACATTTG--TAGGCTGACTTTC 5'& || || .||. |||.|| &5' ---GTTCACTAGTCTTCCTGGAA- 3' Cbx4 mmu-miR-322 beg:2171 end:2194 pic:3' AGGTTTTGTA--CTTAACGACGAC 5'& . ||||| ||| |||||||| &5' -TGAAAACTCCCGAA-TGCTGCTG 3' Cbx4 mmu-miR-322 beg:641 end:660 pic:3' AGGTTTTGTACTTAACGACGAC 5'& ||.|.||| ||||||| &5' TCTAGAACC-----TGCTGCT- 3' Cbx4 mmu-miR-323-5p beg:186 end:208 pic:3' CGCTTGC--GCGGTGCCTGGTGGA 5'& ||.| | | .|||||||| &5' --GAGCCTTCCCTGTGGACCACC- 3' Cbx4 mmu-miR-324-3p beg:2742 end:2761 pic:3' TCGTCGTGGACCCCGTCACC 5'& || .||||.| |||||| &5' AGGGGCACTT-GGGCAG--- 3' Cbx4 mmu-miR-324-5p beg:752 end:769 pic:3' TGTGGTTACG-GGATCCCCTACGC 5'& || || .|||||||. &5' --------GCTCCAGGGGGATGT- 3' Cbx4 mmu-miR-326 beg:1768 end:1791 pic:3' TGACCTC-CTTCCCGGGTCTCC 5'& ||||| |.| ||||.||||| &5' --TGGAGAGGAAGGCCTAGAGG 3' Cbx4 mmu-miR-327 beg:2730 end:2747 pic:3' TAGGAGTACGGGGAGTTCA 5'& |.|| .||.||||| &5' --CTTCC--TCCTTCAAG- 3' Cbx4 mmu-miR-327 beg:1113 end:1135 pic:3' TAGGAGTA---CGGGGAGTTCA 5'& |||.. |||||||||| &5' --CCTTGCCCCGCCCCTCAAG- 3' Cbx4 mmu-miR-327 beg:2684 end:2704 pic:3' TAGGAG-TACGG--GGAGTTCA 5'& |||| .|||. |||||. &5' --CCTCGGTGCTGGCCTCAG-- 3' Cbx4 mmu-miR-327 beg:2952 end:2970 pic:3' TAGGAGTACGG----GGAGTTCA 5'& |||||. |||||.| &5' -----CATGCTTAAGCCTCAGG- 3' Cbx4 mmu-miR-330 beg:224 end:242 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& || .||| |.||||| &5' ------GAGGCAGTCTCAGAG- 3' Cbx4 mmu-miR-330 beg:1770 end:1791 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& .||| . |||||.||||. &5' ----GAGAGGAAGGCCTAGAGG 3' Cbx4 mmu-miR-330 beg:2961 end:2986 pic:3' CGGATTCTGTGTC-CGGGTCTCT 5'& |||| ||.||||| | |||||| &5' GCCTCAGGCACAGAGGCCAGAG- 3' Cbx4 mmu-miR-330 beg:3017 end:3034 pic:3' CGGATTCTGTGTCCGGGTCTCT 5'& |||| | | |||||||| &5' GCCT----C-CT-GCCCAGAG- 3' Cbx4 mmu-miR-331-3p beg:2198 end:2220 pic:3' AAGATC-CTATC-CGGGTCCCCG 5'& |||| |.|.| |||. ||| &5' --CTAGAGGTGGAGCCTT--GGC 3' Cbx4 mmu-miR-331-3p beg:2362 end:2383 pic:3' AAGATCC-TATCCGGGTCCCCG 5'& ||.|| ||.||. ||||| &5' --CTGGGTATGGGTGCAGGG-- 3' Cbx4 mmu-miR-338-3p beg:2687 end:2698 pic:3' GTTGTTTTAGTGACTACGACCT 5'& |.|||||| &5' -------------GGTGCTGG- 3' Cbx4 mmu-miR-339-5p beg:1323 end:1344 pic:3' GCACTCGAGGACCTC-CTGTCCCT 5'& ||.| ||.| ||||||| &5' --TGGGAG---GGGGCGACAGGG- 3' Cbx4 mmu-miR-33star beg:2528 end:2549 pic:3' CACTACGTGACACCTTTGTAAC 5'& ||| |||.||||| .||| &5' -TGA-GCATTGTGGCT-TATT- 3' Cbx4 mmu-miR-344 beg:430 end:451 pic:3' TGTCAGTC-CGAAACCGATCTAGT 5'& .| |.|| |||||||| &5' ------GGAGTTTCCTCTAGATCA 3' Cbx4 mmu-miR-345-3p beg:1538 end:1558 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& |||.| |.|||.|||||| &5' -TCTTC---CTCCTGGTTCAG- 3' Cbx4 mmu-miR-346 beg:1737 end:1760 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& ||.||||| | |.||| ||.| &5' AGGGGCAG--AGTTGGGAAGGC- 3' Cbx4 mmu-miR-346 beg:1513 end:1535 pic:3' TCTCCGTCCGTGAGCCCGTCTGT 5'& ||| || .|| ||||||| &5' ---GGCCAGCTTTCT-GCAGACA 3' Cbx4 mmu-miR-3470a beg:2328 end:2348 pic:3' GGTCGGACCAGATGTTTCACT 5'& |||||||||||| |.||| &5' --AGCCTGGTCTAC-AGGTG- 3' Cbx4 mmu-miR-3470a beg:2449 end:2469 pic:3' GGTCGGACCAGATGTTTCACT 5'& ||||||||||. |||. &5' CCAGCCTGGTTGTCAAG---- 3' Cbx4 mmu-miR-3470b beg:2328 end:2348 pic:3' GGTCGGACCAGATGTCTCACT 5'& |||||||||||||| ||| &5' --AGCCTGGTCTACAG-GTG- 3' Cbx4 mmu-miR-3470b beg:1679 end:1701 pic:3' GGTCGGACCAGATGTCTCACT 5'& |||| ||||.|. || ||| &5' -CAGCGTGGTTTGGAGTGTG- 3' Cbx4 mmu-miR-3473 beg:1233 end:1254 pic:3' CCGACTCGGT---AGAGAGGT 5'& || |||| ||||||| &5' --CTCTGCCAGGCTCTCTCC- 3' Cbx4 mmu-miR-3474 beg:2669 end:2686 pic:3' CTTAGGTGCAGAGGAGGGTCCC 5'& || | ||||.|||| &5' ---TCTGC----CCTCTCAGG- 3' Cbx4 mmu-miR-3475 beg:518 end:540 pic:3' AAGTTT-GGTACACGGAGGTCT 5'& ||.| || .||||||. &5' TTTATTTCCCCT--TCTCCAGG 3' Cbx4 mmu-miR-3475 beg:1564 end:1585 pic:3' AAGTTTGGTACA-CGGAGGTCT 5'& ||..|| || ||||||.| &5' --CAGGCCCTGGGGCCTCCGG- 3' Cbx4 mmu-miR-34a beg:112 end:130 pic:3' TGTTGGTCGATTCTGTGACGGT 5'& ||| || |||||.| &5' ----CCACCTCT--CACTGTC- 3' Cbx4 mmu-miR-350 beg:1691 end:1715 pic:3' CTTTCACATACC--CGAA-ACACTT 5'& ..|||||.|| |. |||| &5' -GGAGTGTGTGTTTGTGTGTGTG-- 3' Cbx4 mmu-miR-350 beg:3004 end:3020 pic:3' CTTTCACATACCCG-AAACACTT 5'& |||. |||||||| &5' ----------GGGTATTTGTGAA 3' Cbx4 mmu-miR-350 beg:1920 end:1943 pic:3' CTTTCACATAC---CCG-AAACACTT 5'& |||| ||| |||||||| &5' -----TGTAGCCCCGGCTTTTGTGAA 3' Cbx4 mmu-miR-361 beg:1574 end:1602 pic:3' CATGG-----GGACCTCTAAGACTATT 5'& .|| |||||.|| ||||.|.| &5' --GCCTCCGGCCTGGGGAATCTGGTGA 3' Cbx4 mmu-miR-361 beg:550 end:579 pic:3' CATGGGGACCTCT-----AAGACTATT 5'& ||| ||.||| ||.||||| &5' GTAACCTTGGTATATATTTTTTGATA- 3' Cbx4 mmu-miR-361 beg:349 end:368 pic:3' CATGGGGACCTCTAAGACTATT 5'& ||||| .| |||||| &5' ---CCCCTTAGGG--CTGATA- 3' Cbx4 mmu-miR-361 beg:2581 end:2599 pic:3' CATGGGGACCTCTAAGACTATT 5'& .|| |||.|||||||.. &5' -----TCT-GAGGTTCTGATGG 3' Cbx4 mmu-miR-362-5p beg:2704 end:2724 pic:3' TAAGTGTGGATCCAAGGTTCCTAA 5'& ||| |||| ||||||| &5' ----ACAAGTAGGA--CAAGGAT- 3' Cbx4 mmu-miR-363 beg:2004 end:2016 pic:3' ATGTCTACCTATGGCACGTTAA 5'& |.|||.||| &5' ------------CTGTGTAAT- 3' Cbx4 mmu-miR-363 beg:719 end:740 pic:3' ATGTCTACCTATGGCACGTTAA 5'& ||||| | |||||||| &5' ---AGATGTTGAAGGTGCAATT 3' Cbx4 mmu-miR-365 beg:2994 end:3014 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& |||| |.||||.||| &5' --AAGGCCC--TGGGGGTATT- 3' Cbx4 mmu-miR-365 beg:2583 end:2605 pic:3' TATTCCTAAAAATCCCCGTAAT 5'& |.||| ||||||| &5' -TGAGGTTCTGAT-GGGCATT- 3' Cbx4 mmu-miR-376c beg:588 end:608 pic:3' TGCACTTTAAAGGAGATACAA 5'& ||| .|| ..||||||| &5' --GTGT-GTTGTTTCTATGT- 3' Cbx4 mmu-miR-376c beg:2001 end:2013 pic:3' TGCACTTTAAAGGAGATACAA 5'& |||||.||| &5' -----------CCTCTGTGT- 3' Cbx4 mmu-miR-378star beg:1590 end:1611 pic:3' TGTGTCCTGGACCTC----AGTCCTC 5'& | |.|||| | |||||| &5' -----GAATCTGGTGAGCTTCAGGA- 3' Cbx4 mmu-miR-379 beg:3096 end:3113 pic:3' GGATGCAAGGTATCAGATGGT 5'& | |||| |||.||.| &5' -----GATCCA-AGTTTATC- 3' Cbx4 mmu-miR-412 beg:2195 end:2212 pic:3' GCCGATCACCTGG---TCCACTT 5'& |||| |||||.| &5' ---------GACCTAGAGGTGGA 3' Cbx4 mmu-miR-425 beg:3142 end:3155 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& | | |||||||| &5' -----------GTTGGTGTCATT 3' Cbx4 mmu-miR-431star beg:2206 end:2230 pic:3' TCTTCGGGA-CGTTCTGCTGGAC 5'& |.||||.| |||. | ||| &5' -GGAGCCTTGGCAGTA-GGTCTG 3' Cbx4 mmu-miR-432 beg:524 end:541 pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||| || |||||.|| &5' ---CCC-CTT-----CTCCAGGA 3' Cbx4 mmu-miR-448 beg:3242 end:3259 pic:3' TACCCTGTAGGATGTATACGTT 5'& |||.| .|.|||||| &5' ---GGATA----GCGTATGCA- 3' Cbx4 mmu-miR-449b beg:112 end:131 pic:3' CGGTCGATTGTTGTGACGGA 5'& ||| || |||||.|| &5' -CCACCTCT---CACTGTCT 3' Cbx4 mmu-miR-450a-3p beg:2539 end:2559 pic:3' TACTTACGTTTCG--TAGGGGTTA 5'& || .||||||| &5' ------GCTTATTTAGTCCCCAA- 3' Cbx4 mmu-miR-450a-3p beg:2650 end:2669 pic:3' TACTTACGTTT-CGTAGGGGTTA 5'& ||||.| || ||||||. &5' -----TGCAGAGGC-TCCCCAG- 3' Cbx4 mmu-miR-450a-3p beg:825 end:847 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& .||.| |||| ||.|.|| &5' GTGGAA--AAAGACTCTCTAA- 3' Cbx4 mmu-miR-450b-3p beg:27 end:50 pic:3' TACGTAC--GTTTTACAAGGGTTA 5'& ||| ||.|. |||||||| &5' --GCACCTACAGAG-GTTCCCAA- 3' Cbx4 mmu-miR-450b-5p beg:1513 end:1533 pic:3' ATAAGTCC--TTGTATGACGTTTT 5'& || |.| |||||.| &5' ------GGCCAGCTTTCTGCAGA- 3' Cbx4 mmu-miR-452 beg:1516 end:1535 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||| ..||||||.||| &5' ----CAGC--TTTCTGCAGACA 3' Cbx4 mmu-miR-452 beg:1814 end:1834 pic:3' CAGAGTCAAAGGAGACGTTTGT 5'& ||||||. |||||..| &5' ----CAGTTTTGGCTGCAGGC- 3' Cbx4 mmu-miR-464 beg:545 end:565 pic:3' ATAGAGTGTCTTATTTGAACCAT 5'& ||| |.||| ||||||| &5' -----CACC-AGTAACCTTGGTA 3' Cbx4 mmu-miR-465b-3p beg:2605 end:2625 pic:3' AGATGAATCTTTC-CGGGACTAG 5'& ||| |.|.||||. &5' ------TAGTTCTTGTCTTGATT 3' Cbx4 mmu-miR-465c-5p beg:464 end:485 pic:3' GTCTAGTCGCGGTAAGATTTAT 5'& |||| ||| |.|||.|||.| &5' CAGA-CAGA-CTATTTTAAGT- 3' Cbx4 mmu-miR-466b-3-3p beg:1693 end:1716 pic:3' AGAATACACACG--CACATACATAA 5'& .||||||. ||||.|||.| &5' ----GTGTGTGTTTGTGTGTGTGT- 3' Cbx4 mmu-miR-466b-5p beg:3273 end:3297 pic:3' GTACATGTACATGTGTGTGTAG 5'& ||| |.|||||| |..| .|| &5' CATATGCATGTAAATGCTTAT- 3' Cbx4 mmu-miR-466f-3p beg:1693 end:1717 pic:3' CACACATACACACACACATAC 5'& ||||||.| |||||||||.|| &5' GTGTGTGTTTGTGTGTGTGTG 3' Cbx4 mmu-miR-466g beg:1693 end:1716 pic:3' ACACACACGTACACAGACATA 5'& |||||||. ||||| |||.| &5' -GTGTGTGTTTGTGTGTGTGT 3' Cbx4 mmu-miR-466i beg:1692 end:1716 pic:3' ATCACACATACACACACACATA 5'& |||||||.| |||||||||.| &5' -AGTGTGTGTTTGTGTGTGTGT 3' Cbx4 mmu-miR-466l beg:389 end:406 pic:3' TTATACACACGTACATAAATAT 5'& ||.| ||||||||| &5' --------TGTAGGTATTTATA 3' Cbx4 mmu-miR-467a beg:389 end:404 pic:3' GCGTATATGTACGTCCGTGAAT 5'& ||.|||.|.||| &5' ----------TGTAGGTATTTA 3' Cbx4 mmu-miR-467a beg:3272 end:3296 pic:3' GCGTATATGTACGTCCGTGAAT 5'& ||||||.||||.| ..|||| &5' -GCATATGCATGTAAATGCTTA 3' Cbx4 mmu-miR-467b beg:371 end:405 pic:3' GTATATGT----------ACGTCCGTGAATG 5'& ||||||.| ||.|||.|.|||. &5' CATATATATATATTTATTTGTAGGTATTTAT 3' Cbx4 mmu-miR-467b beg:2744 end:2755 pic:3' GTATATGTACGTCCGTGAATG 5'& .|||||||. &5' -----------GGGCACTTG- 3' Cbx4 mmu-miR-467e beg:364 end:391 pic:3' TGTATATGTACGA--GTGTGAATA 5'& |.|||||||| .|.|.|||| &5' ATATATACATATATATATATTTAT 3' Cbx4 mmu-miR-467e beg:3272 end:3297 pic:3' TGTATATGTACGAGTGTGAATA 5'& .|||||.||||. |..||||| &5' GCATATGCATGTAAATGCTTAT 3' Cbx4 mmu-miR-467f beg:1693 end:1716 pic:3' ACATCCACACACACACATATA 5'& ||. |||| |||||||.|.| &5' -GTGTGTGTTTGTGTGTGTGT 3' Cbx4 mmu-miR-467h beg:364 end:391 pic:3' TGTATATGTAC--GTGTGTGAATA 5'& |.|||||||| .|.|.|.|||| &5' ATATATACATATATATATATTTAT 3' Cbx4 mmu-miR-469 beg:2029 end:2050 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& ||| .| |.||.|.||||| &5' ----ACCCT-GTGAGTGGAGGAGGC- 3' Cbx4 mmu-miR-470 beg:728 end:752 pic:3' TGAGTGGTCACGGT------CAGGTTCTT 5'& .|||| ||||.||| &5' -------GGTGCAATTCAGTGTCCGAGA- 3' Cbx4 mmu-miR-470 beg:522 end:541 pic:3' TGAGTGGTCACGGTCAGGTTCTT 5'& .|| || |. ||||.||| &5' -TTC-CC----CTTCTCCAGGAA 3' Cbx4 mmu-miR-470 beg:34 end:53 pic:3' TGAGTGGTCA-CGGTCAGGTTCTT 5'& ||| |.. |||||.| &5' ------CAGAGGTTC--CCAAGGA 3' Cbx4 mmu-miR-483star beg:1861 end:1887 pic:3' TTCTG--CCCTCCCCTCCTCACT 5'& ..|.| ||||||||||||| || &5' GGGGCGGGGGAGGGGAGGAGGGA 3' Cbx4 mmu-miR-483star beg:1869 end:1887 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& ||||||||||||| || &5' -----GGGAGGGGAGGAGGGA 3' Cbx4 mmu-miR-483star beg:949 end:973 pic:3' TTCTGCCCTC-CCCTCCTCACT 5'& |||| |||| |||.||| || &5' AAGAGTGGAGTGGGGGGAATG- 3' Cbx4 mmu-miR-484 beg:2370 end:2387 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| | |.||||| &5' -------GGGTGCAGGGCCTG- 3' Cbx4 mmu-miR-485 beg:1506 end:1526 pic:3' CTTAAGTAG-TGCCGGTCGGAGA 5'& || .||||||||.|. &5' -----CACCAGCGGCCAGCTTT- 3' Cbx4 mmu-miR-489 beg:3137 end:3157 pic:3' CGACGGTATATACACCACAGTAA 5'& ||| |||||||||| &5' ----CCACAGT--TGGTGTCATT 3' Cbx4 mmu-miR-489 beg:291 end:313 pic:3' CGACGGTATATACACCACAGTAA 5'& |.. |.|| |||||||.||| &5' ---GTT-TGTACGTGGTGTTATT 3' Cbx4 mmu-miR-493 beg:1523 end:1546 pic:3' GGACCG-TGTGTCATCCTGGAAGT 5'& ||| |||||| ||.|||| &5' -CTGCAGACACAGC--GATCTTC- 3' Cbx4 mmu-miR-496 beg:1001 end:1020 pic:3' CTCTAACCGGTACATTATGAGT 5'& ||||.. | ||.|||| &5' -----TGGCTG-GCGATGCTCA 3' Cbx4 mmu-miR-497 beg:2172 end:2194 pic:3' ATGTTTGGTGTCACACGACGAC 5'& |||| | | |||||||| &5' ---AAACTCCCGAATGCTGCTG 3' Cbx4 mmu-miR-497 beg:645 end:660 pic:3' ATGTTTGGTGTCACACGACGAC 5'& .|||| ||||||| &5' ---GAACC------TGCTGCT- 3' Cbx4 mmu-miR-501-5p beg:2748 end:2769 pic:3' AAAGTGGGTCCCTGTTTCCTAA 5'& |||. || | |||||.|| &5' ---CACTTGGGCAGAAAGGGTT 3' Cbx4 mmu-miR-503 beg:637 end:661 pic:3' GACGTCATGA-CAAGGGCGACGAT 5'& || || | ||.||||||| &5' --GCTCT-CTAGAACCTGCTGCTA 3' Cbx4 mmu-miR-503 beg:1293 end:1319 pic:3' GACGTCATGACAAGGGCGACGAT 5'& |||| ||..|| ||. || ||. &5' CTGCTGTGTTGGGCCTTCTACTG 3' Cbx4 mmu-miR-509-5p beg:1676 end:1699 pic:3' TACTAACGGTGTA--AGACCTCAT 5'& ||| .|.| |.||||||. &5' --GATGACAGCGTGGTTTGGAGTG 3' Cbx4 mmu-miR-532-3p beg:947 end:969 pic:3' ACGTTCGGAACCCACACCCTCC 5'& | ||| ||| |||||.|| &5' -GGAAGAG-TGGA-GTGGGGGG 3' Cbx4 mmu-miR-540-3p beg:2790 end:2808 pic:3' GGTCCTAGCTGGAGACTGGA 5'& ||.| | |||||||| &5' ---GGGT-GGTCTCTGACC- 3' Cbx4 mmu-miR-540-3p beg:3058 end:3079 pic:3' GGTCC-TAGCTGGAGACTGGA 5'& |||| .|| .|| |||||. &5' CCAGTAGTCTGCC-CTGACT- 3' Cbx4 mmu-miR-540-3p beg:1336 end:1359 pic:3' GGTCCTAGCTGG---AGACTGGA 5'& ||||. || |. ||||.||| &5' -CAGGG-CG-CTGAGTCTGGCCT 3' Cbx4 mmu-miR-542-5p beg:2342 end:2362 pic:3' AGCACTGTACTACTAGGGGCTC 5'& ||| ||||| |||..|| &5' --GTGCCATGAC--TCCTTGA- 3' Cbx4 mmu-miR-546 beg:1821 end:1839 pic:3' CTGAGGCACGGTGGTA 5'& |.|| | ||||.|| &5' GGCTGCAGGCCATCA- 3' Cbx4 mmu-miR-568 beg:557 end:586 pic:3' CACACATATGTAA---------ATATGTA 5'& || |||||.||| |.|||| &5' -TG-GTATATATTTTTTGATACTGTACA- 3' Cbx4 mmu-miR-574-3p beg:1702 end:1727 pic:3' ACACCCACACA-CGTACTCGCAC 5'& |||| |||||| ||| |.| ||| &5' TGTGTGTGTGTGGCA-GGGGGTG 3' Cbx4 mmu-miR-592 beg:2564 end:2583 pic:3' TGTAGTAGCGTATA--ACTGTGTTA 5'& || |||||||. &5' --------GCTCTCTGTGACACAG- 3' Cbx4 mmu-miR-615-5p beg:90 end:104 pic:3' CTAGGCTCGTGGCCCCTGGGGG 5'& || ||||.||| &5' ----------CCTGGGATCCC- 3' Cbx4 mmu-miR-652 beg:2335 end:2352 pic:3' GTGTTGGGATCACCGCGGTAA 5'& .||| ||.||||| &5' ------TCTACAGGTGCCAT- 3' Cbx4 mmu-miR-665 beg:1077 end:1093 pic:3' TCCCTGGAGTCGGAGGACCA 5'& || || |.|||||| &5' -----CCCCA-CTTCCTGG- 3' Cbx4 mmu-miR-665 beg:1533 end:1554 pic:3' TCCCTGGAGTCGGAGGACCA 5'& || ||.||. ||||||||| &5' AGCGATCTT--CCTCCTGGT 3' Cbx4 mmu-miR-665 beg:2279 end:2300 pic:3' TCCCTGGAGTCG-GAGGACCA 5'& ||| ..|| ||||||| &5' --GGAAGATGGCTCTCCTGG- 3' Cbx4 mmu-miR-665 beg:2307 end:2328 pic:3' TCCCTGGAGTC-GGAGGACCA 5'& | | .|| |.|||||| &5' --GTTCACTAGTCTTCCTGG- 3' Cbx4 mmu-miR-666-5p beg:129 end:150 pic:3' CCGAGAGTGTCGACACGGGCGA 5'& || ||| |. |||||.|| &5' --CTTCCAC-GTGGTGCCTGC- 3' Cbx4 mmu-miR-666-5p beg:1829 end:1852 pic:3' CCGAGAGT-GTCGACACGGGCGA 5'& ||| ||| |.|||||| |.| &5' GGCCATCAGCGGCTGTGGCTG-- 3' Cbx4 mmu-miR-667 beg:3142 end:3155 pic:3' GAACCCGACCCACCGTCCACAGT 5'& |. ||||||| &5' -------------GTTGGTGTCA 3' Cbx4 mmu-miR-668 beg:1643 end:1666 pic:3' CCATCACCCGGCTCGGC--TCACTGT 5'& |||.|||||| ||||||| &5' ------GGGTCGAGCCTATAGTGACA 3' Cbx4 mmu-miR-668 beg:1794 end:1817 pic:3' CCATCAC-CCG-GCT-CGG--CTCACTGT 5'& | ||| ||| || |||||.| &5' ------GAGGCTCGATGCACGGAGTGGC- 3' Cbx4 mmu-miR-669a beg:1524 end:1539 pic:3' TGTACTTGTACGTGTGTGTTGA 5'& |||| |||||.| &5' ---------TGCAGACACAGC- 3' Cbx4 mmu-miR-669f beg:1693 end:1717 pic:3' TATGCACACACA--CATACATATAC 5'& |||||||| ||.|||.|.|| &5' ----GTGTGTGTTTGTGTGTGTGTG 3' Cbx4 mmu-miR-669h-3p beg:1696 end:1717 pic:3' ACACGTACACACATATACGTAT 5'& ||||. |||||||.|.|| &5' TGTGTTTGTGTGTGTGTG---- 3' Cbx4 mmu-miR-669h-3p beg:3247 end:3261 pic:3' ACACGTACACACATATACGTAT 5'& | |||||||| &5' -----------GCGTATGCATA 3' Cbx4 mmu-miR-669i beg:1695 end:1717 pic:3' CATACGTACACACATATACGT 5'& ||.||. |||||||.|.|| &5' GTGTGTTTGTGTGTGTGTG-- 3' Cbx4 mmu-miR-669j beg:585 end:611 pic:3' ACAAACGTACACTC-----ATATACGT 5'& || .|||| |||.|||| &5' ----TGGGTGTGTTGTTTCTATGTGCA 3' Cbx4 mmu-miR-669k beg:3241 end:3261 pic:3' AACGTA-CGCACATATACGTAT 5'& ||| || |||| ||||||| &5' TTGGATAGCGT----ATGCATA 3' Cbx4 mmu-miR-669m beg:1695 end:1717 pic:3' TATACAAACACACCTACATATA 5'& .|.|||||||||| |||. &5' GTGTGTTTGTGTGTGTGTG--- 3' Cbx4 mmu-miR-669n beg:2890 end:2909 pic:3' TGTGTGTAGGTGTGTGTTTA 5'& |||||.| |||||| || &5' ACACATACCCACAC-CA--- 3' Cbx4 mmu-miR-671-3p beg:936 end:961 pic:3' CCACC-TCGGGACTCTTGGCCT 5'& |||| ||||. || | .||| &5' GGTGCTAGCCTGGAAGAGTGGA 3' Cbx4 mmu-miR-672 beg:1616 end:1634 pic:3' AGTGTGTGTCATGTGGTTGGAGT 5'& .| .|| |.||||| &5' ------GCTG-GCAA-AGCCTCA 3' Cbx4 mmu-miR-673-3p beg:1913 end:1933 pic:3' CCACGTGTCTTGA--GTCGGGGCCT 5'& .||. .|||||||| &5' -------GGAGTTTGTAGCCCCGG- 3' Cbx4 mmu-miR-673-3p beg:1239 end:1259 pic:3' CCACGTGTCTTGAGTC-GGGGCCT 5'& || ||| .||| ||||||| &5' ---GC-CAG-GCTCTCTCCCCGGA 3' Cbx4 mmu-miR-673-3p beg:2310 end:2329 pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| | || .||.||| &5' ----CACT--AGTCT-TCCTGGA 3' Cbx4 mmu-miR-673-3p beg:2987 end:3005 pic:3' CCACGTGTCTTGAG---TCGGGGCCT 5'& .|| || .||||.|| &5' -------GGAGTTCAAAGGCCCTGG- 3' Cbx4 mmu-miR-673-3p beg:3115 end:3136 pic:3' CCACGTGTCT----TGAGTC-GGGGCCT 5'& ||| |||| ||..||| &5' ------CAGTCTTTACTCCATCCTTGGA 3' Cbx4 mmu-miR-674 beg:1541 end:1560 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& .| ||||. .|||||| &5' ----TC-CTCCTGGTTCAGTG- 3' Cbx4 mmu-miR-674 beg:732 end:746 pic:3' ATGTGGTGAGGGTAGAGTCACG 5'& || .||||||. &5' -----------CAATTCAGTGT 3' Cbx4 mmu-miR-676star beg:1038 end:1056 pic:3' CGTTCAGGATTCCAACATCTCA 5'& |.|| .|||||||||| &5' -----TTCT-GGGTTGTAGAG- 3' Cbx4 mmu-miR-678 beg:2418 end:2431 pic:3' GGAGGTCAGGAACGTGGCTCTG 5'& | .||||||. &5' ------------GGGCCGAGAT 3' Cbx4 mmu-miR-679 beg:3099 end:3122 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& ||||| |.|.| |||||||. &5' -CCAAGT-TTATCCCACAGTCT 3' Cbx4 mmu-miR-679 beg:971 end:993 pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& |.| ||||||.|| | .||||| &5' ATC-AGAGTCGCC-C-TAGTCC 3' Cbx4 mmu-miR-684 beg:912 end:934 pic:3' AACTGA---ACTTCCCTTTTGA 5'& ||||| || |||||||. &5' -TGACTCAGTGT-GGGAAAAT- 3' Cbx4 mmu-miR-684 beg:1764 end:1784 pic:3' AACTGAACTTC-CCTTTTGA 5'& || ||.|| ||||..| &5' --GAGATGGAGAGGAAGGC- 3' Cbx4 mmu-miR-686 beg:2427 end:2442 pic:3' AGAAGTGGCAGAC-CCTTCGTTA 5'& ||| ||.||||. &5' ---------TCTAAGGGAGCAG- 3' Cbx4 mmu-miR-687 beg:1151 end:1171 pic:3' AGTAACGACGTAAGGTCCTATC 5'& |||||.. |||||||| &5' ----TGCTGTGGGCCAGGATA- 3' Cbx4 mmu-miR-688 beg:867 end:878 pic:3' CTTATTCATCAGCGGACGCT 5'& |||||.|. &5' ------------GCCTGTGG 3' Cbx4 mmu-miR-691 beg:521 end:541 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||| |.|||| |||||| &5' -TTTCCCCTTCTC--CAGGAA- 3' Cbx4 mmu-miR-692 beg:36 end:55 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||||. | |||.|||| &5' ----GAGGTTCCCAAGGAGA- 3' Cbx4 mmu-miR-693-3p beg:2345 end:2368 pic:3' AATGTCGGTGT--AG--ACTTTCGACG 5'& ||||.. || ||||||||| &5' -----GCCATGACTCCTTGAAAGCTG- 3' Cbx4 mmu-miR-693-5p beg:1837 end:1852 pic:3' CTTTTGAAAGCCTACACCGAC 5'& ||| |||||||| &5' ---------CGGCTGTGGCTG 3' Cbx4 mmu-miR-696 beg:2897 end:2917 pic:3' GGGTGTCGTTCGTGTGCG 5'& |||||| || || |.| &5' CCCACACCATCCAAATG- 3' Cbx4 mmu-miR-696 beg:811 end:830 pic:3' GGGTGTCGTTCGTGTGCG 5'& ||||| |||| ||||. &5' CCCAC--CAAGGTCACGT 3' Cbx4 mmu-miR-696 beg:3266 end:3283 pic:3' GGGTGTCGTTCGTGTGCG 5'& .||| ||||.|.|| &5' -TCACT---AGCATATGC 3' Cbx4 mmu-miR-698 beg:1866 end:1884 pic:3' TCCCTTCCTTTGCTCTTAC 5'& .|||.||| | |||. &5' GGGGGAGGGGAGGAGG--- 3' Cbx4 mmu-miR-705 beg:109 end:139 pic:3' ACGGGTGGGGT--------GGAGGGTGG 5'& ||.|||||.| |||.|||| &5' TGTCCACCTCTCACTGTCTCCTTCCAC- 3' Cbx4 mmu-miR-711 beg:79 end:104 pic:3' GAATGTAGAGAGGGGCCC-AGGG 5'& |||.| || |||||.||| |||| &5' CTTGC-TCACTCCCTGGGATCCC 3' Cbx4 mmu-miR-713 beg:911 end:926 pic:3' CGACACACGGAAGTCACGT 5'& ||| ||||||. &5' -----GTGAC-TCAGTGT- 3' Cbx4 mmu-miR-713 beg:1295 end:1319 pic:3' CGACACA---CGGAAGTC-ACGT 5'& ||||||| |||||| || &5' GCTGTGTTGGGCCTTCTACTG-- 3' Cbx4 mmu-miR-713 beg:729 end:746 pic:3' CGACACACGG-AAGTCACGT 5'& |||| |||||||. &5' -----GTGCAATTCAGTGT- 3' Cbx4 mmu-miR-720 beg:1774 end:1797 pic:3' ACC-TCCGGGG---TCGCTCTA 5'& || |||||. .|||.|| &5' -GGAAGGCCTAGAGGGCGGGA- 3' Cbx4 mmu-miR-741 beg:792 end:813 pic:3' AGATGTATCTTACCGT--AGAGAGT 5'& ||.| || ||||||| &5' -------AGGACGGACCCTCTCTCA 3' Cbx4 mmu-miR-742 beg:2902 end:2923 pic:3' AAATGGGTCGTACCACCGAAAG 5'& ||| || |||||||. &5' ---ACCATCCAAA-TGGCTTTT 3' Cbx4 mmu-miR-742star beg:2024 end:2042 pic:3' ACTAATCGTTGGTACACTCAT 5'& || ||| |||||||. &5' ------GCCACCCTGTGAGTG 3' Cbx4 mmu-miR-743b-5p beg:2439 end:2461 pic:3' ACTAC-CTGT-GGTCAGACTTGT 5'& ||| |.|. |||| |||. &5' -GATAAGGCGTCCAGCCTGG--- 3' Cbx4 mmu-miR-744 beg:1104 end:1127 pic:3' ACGACAATCGGGATCGGGGCGT 5'& |||| |.||||| ||||||| &5' -GCTGGTGGCCCTTGCCCCGC- 3' Cbx4 mmu-miR-744star beg:1326 end:1342 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||| |||.|||| &5' -----GAGGG----GGCGACAG 3' Cbx4 mmu-miR-758 beg:1655 end:1678 pic:3' ATCACC-TGGTCCAGTGTTT 5'& ||||| |||||| || ||. &5' TAGTGACACCAGGGCAGAAG 3' Cbx4 mmu-miR-758 beg:1155 end:1175 pic:3' ATCACCTGGTCCAGTGTTT 5'& ||||.||||| .||||. &5' --GTGGGCCAGGATACAAG 3' Cbx4 mmu-miR-760 beg:3018 end:3038 pic:3' AGGGGTGTCTGGGTCTCGGC 5'& ||.| | .||||||||.| &5' -CCTC-CT-GCCCAGAGCTG 3' Cbx4 mmu-miR-760 beg:221 end:244 pic:3' AGGGG---TGTCTGGGTCTCGGC 5'& |||| .||| |.||||||. &5' -CCCCGAGGCAGTCTCAGAGCT- 3' Cbx4 mmu-miR-760 beg:2969 end:2988 pic:3' AGGGGTGTCTG-GGTCTCGGC 5'& |||||| |||||||. &5' ----CACAGAGGCCAGAGCT- 3' Cbx4 mmu-miR-761 beg:1603 end:1623 pic:3' ACACAGTCA-AAGTGGGACGACG 5'& |||| ||| |||||||| &5' ----TCAGGATTCTCCCTGCTG- 3' Cbx4 mmu-miR-764-5p beg:2584 end:2605 pic:3' TCCTCCTGTAC-ACTCGTGG 5'& |||| || ||.|||.. &5' --GAGGTTCTGATGGGCATT 3' Cbx4 mmu-miR-767 beg:124 end:146 pic:3' AC-GAGTCTGTTGGTACCACGT 5'& | ||| |.|||||| &5' -GTCTCCTTCCA-CGTGGTGC- 3' Cbx4 mmu-miR-767 beg:3170 end:3190 pic:3' ACGAGTCTGT-TGGTACCACGT 5'& ||||.. | |||||||. &5' ----CAGATGCAGCATGGTGT- 3' Cbx4 mmu-miR-7a beg:2300 end:2325 pic:3' TGTTGTTTTAGTGATCAGAAGGT 5'& .| || ||||||||||||| &5' GCTACTAGTTCACTAGTCTTCC- 3' Cbx4 mmu-miR-872 beg:539 end:561 pic:3' GGAC-TTGATTGTTCATTGGAA 5'& ||| .|| || ||||||||| &5' -CTGCGAC--ACCAGTAACCTT 3' Cbx4 mmu-miR-877 beg:429 end:446 pic:3' GGGACGCGGTAGAGGAGATG 5'& || | .|.||||||| &5' ---TG-GA-GTTTCCTCTA- 3' Cbx4 mmu-miR-877star beg:1323 end:1345 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& ||||||| ||| || |||.| &5' TGGGAGG-GGGCGAC-AGGGC- 3' Cbx4 mmu-miR-877star beg:1768 end:1793 pic:3' ACC-CTCCTCCCTCTTCTCCTGT 5'& ||| ||||| || |||||.| &5' TGGAGAGGAAGGCCTAGAGGGC- 3' Cbx4 mmu-miR-877star beg:1861 end:1883 pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |||. |.|||||..||||| &5' -GGGGCGGGGGAGGGGAGGA-- 3' Cbx4 mmu-miR-879 beg:1892 end:1915 pic:3' CCGAATCTCGATATTCGGAGA 5'& |||| ||||||.| &5' -GCTTTTTTGAAAAAGCCTTT 3' Cbx4 mmu-miR-879 beg:2199 end:2217 pic:3' CCGAATCTCGATATTCGGAGA 5'& ||||| |. .|||||. &5' ----TAGAGGTG-GAGCCTT- 3' Cbx4 mmu-miR-879 beg:2948 end:2969 pic:3' CCGAATCT-CGATATTCGGAGA 5'& |||| ||| |||||||| &5' --CTTACATGCT-TAAGCCTC- 3' Cbx4 mmu-miR-879star beg:2516 end:2536 pic:3' GGCTTTCGAACTTC--GGTATTCG 5'& .|||| ||||.||| &5' -------TTTGATGTCCCATGAGC 3' Cbx4 mmu-miR-880 beg:418 end:438 pic:3' AGATGAGTCTCTCCTACCTCAT 5'& || .||| ||||||| &5' ---ACCTAGATTT-ATGGAGT- 3' Cbx4 mmu-miR-882 beg:1236 end:1254 pic:3' TGATTACGCGATTGAGAGAGGA 5'& ||| | .|||||||| &5' -----TGC-CAGGCTCTCTCC- 3' Cbx4 mmu-miR-882 beg:2824 end:2842 pic:3' TGATTACGCGA-TTGAGAGAGGA 5'& |. |||||||||.| &5' ------GTCACGAACTCTCTCTT 3' Cbx4 mmu-miR-883a-5p beg:23 end:32 pic:3' CATTGACGATGAAGAGAGTCGT 5'& ||||||| &5' ---------------CTCAGCA 3' Cbx4 mmu-miR-883a-5p beg:3066 end:3087 pic:3' CATTGACGA---TGAAGAGAGTCGT 5'& |||| ||| ||||||| &5' ----CTGCCCTGACTG-TCTCAGC- 3' Cbx4 mmu-miR-9 beg:30 end:53 pic:3' AGTATGTCGATCTATTGGTTTCT 5'& | ||||| ||.| ||||.|| &5' -CCTACAG--AGGTTCCCAAGGA 3' Cbx4 mmu-miR-92astar beg:2457 end:2480 pic:3' CATTACGGTGGTTA---GGGGTGGA 5'& |. .||| |||||.|| &5' -----GTTGTCAAGACCCCCCATCT 3' Cbx4 mmu-miR-92astar beg:1069 end:1088 pic:3' CATTACGGTGGTTA-GGGGTGGA 5'& | |||.. ||||||.| &5' -----GGCACTGCACCCCCACTT 3' Cbx4 mmu-miR-92b beg:719 end:739 pic:3' CCTCCGGCCCTGCTCACGTTAT 5'& ||| .| . .||||||| &5' -GAGA-TGTTGAAGGTGCAAT- 3' Cbx4 mmu-miR-96 beg:2119 end:2132 pic:3' TCGTTTTTACACGATCACGGTTT 5'& || ||||||. &5' -----------GCCCGTGCCAG- 3' Cbx4 mmu-miR-1198 beg:2876 end:2900 pic:3' GGTTCGGT-CGGTCCTTGTGTAT 5'& |.||. || ||||||| &5' --AGGCTTTGCATTCTACACATA 3' Cbx4 mmu-miR-568 beg:367 end:385 pic:3' CACACATATGTAAATATGTA 5'& ||||||| ||||.|| &5' -----TATACATATATATAT 3' Cbx4 mmu-miR-568 beg:389 end:409 pic:3' CACACATATGTAAATATGTA 5'& |||| .|||||||.|| &5' ---TGTAGGTATTTATATAT 3' Cbx4 mmu-miR-1198 beg:542 end:570 pic:3' GGTTC-GGTCGGT----CCTTGTGTAT 5'& |.| ||||. || |.|.|| &5' -CGACACCAGTAACCTTGGTATATAT- 3' Cbx4 mmu-miR-1963 beg:1932 end:1950 pic:3' CTTCCGGAGTACTAGAGCAGGGT 5'& ..| ||| ||||||| &5' -----TTTTGTGAA-TCGTCCC- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Cbx4; Pc2 mmu-miR-101b 269 284 GAAGUCGAUAGUGUCAUGACAU ||:||| |||:||| -----ACUGUCA-AGUGCUGA- Cbx4; Pc2 mmu-miR-103 638 661 AGUAUCGGGACAUGUU--ACGACGA- |||:|| || || ||||||| ---GAGCUCUCUAGAACCUGCUGCUA Cbx4; Pc2 mmu-miR-107 638 661 ACUAUCGGGACAUGUU--ACGACGA- |||:|| || || ||||||| ---GAGCUCUCUAGAACCUGCUGCUA Cbx4; Pc2 mmu-miR-122a 67 95 -UGUUUGUGGU-----AACAGUGUGAGGU :|:: :||| ||| | |||||| CGCGGUGGCCAGGCCCUUG-CUCACUCCC Cbx4; Pc2 mmu-miR-124a 121 149 CCGUAAGUGGCG-------------CACGGAAU ||||:|: |||||| ----CUCACUGUCUCCUUCCACGUGGUGCCUG- Cbx4; Pc2 mmu-miR-125a 217 241 -GUGUCCAAUUUCC--CAGAGUCCCU |:||| :||| ||||||| CCGCAGCCCCGAGGCAGUCUCAGA-- Cbx4; Pc2 mmu-miR-125b 217 241 AGUGUUCAA--UCC--CAGAGUCCCU |:||: ||| ||||||| CCGCAGCCCCGAGGCAGUCUCAGA-- Cbx4; Pc2 mmu-miR-128a 177 203 UUUUCUCUGGCC----AAGUGACACU- |:|||||| | ||| |||||: -UAGGAGACCUGAGCCUUCCCUGUGGA Cbx4; Pc2 mmu-miR-128b 177 203 CUUUCUCUGGCC----AAGUGACACU- |:|||||| | ||| |||||: -UAGGAGACCUGAGCCUUCCCUGUGGA Cbx4; Pc2 mmu-miR-134 192 223 -GGGGAGACCAGUUGGUCA-------GUGU- :|||| ||| | ||||| |:|| UUCCCUGUGGACCACCAGAACUGACCCGCAG Cbx4; Pc2 mmu-miR-136 683 724 -AGG-UAGUAGU-------------UUUGU---UUACCUCA ||| ||:||:| |||:| ||||||| UUCCAAUUAUUACCUGCUUGAAUGUAAAUAUUAAAUGGAGA Cbx4; Pc2 mmu-miR-138 543 556 CUAAGUGUUGUGGUCGA :|:|||||||: ----UGCGACACCAGUA Cbx4; Pc2 mmu-miR-140* 183 203 AGGCACCAAGAUGGGACACCAU || || || |||||||| ACC-UGAGCCUUCCCUGUGGA- Cbx4; Pc2 mmu-miR-144 559 585 GAUCAUGUAGU-AGA--UAUGACAU- |:|||:|| |:| |||||||| UUGGUAUAUAUUUUUUGAUACUGUAC Cbx4; Pc2 mmu-miR-149 49 81 -CCUCACU-------UCUGUGCC-UCGGUCU- |||| || |:||| :|||||: AGGAGAAAACGCCCCAGUCGCGGUGGCCAGGC Cbx4; Pc2 mmu-miR-151 222 246 -GGAGUUCC-UCGGAGUCA-GAUC || |:||| ||:||||| ||| GCCCCGAGGCAGUCUCAGAGCUAU Cbx4; Pc2 mmu-miR-154 538 561 GCUUC-CGUUGUGCCUAUUGGAU ||| ||:|||| :|||||| GGAACUGCGACACCAGUAACCUU Cbx4; Pc2 mmu-miR-15b 579 602 -ACAUUUGGUACUACACGACGAU |||| || |:||||:||:| CUGUACACAUGGGUGUGUUGUUU Cbx4; Pc2 mmu-miR-16 290 312 GCGGUUAUAAAUGCACGACGAU- ||::| |||||| ||:|| -UCCGGUUUGUACGUGGUGUUAU Cbx4; Pc2 mmu-miR-17-3p 273 297 AUGUUCACGG--GAG-UGACGUCA- |||||||: ||| ||| |:|| -UCAAGUGCUGACUCUACUCCGGUU Cbx4; Pc2 mmu-miR-18 9 37 AUAGAC---GUGAUCUA----CGUGGAAU :|| ||||||: |||||| AGUCGCGCCCACUAGGACUCAGCACCUA- Cbx4; Pc2 mmu-miR-184 116 139 -UGGGAAUAGUCA-AGAGGCAGGU- |||: ||| ||||| |||| CACCUC--UCACUGUCUCCUUCCAC Cbx4; Pc2 mmu-miR-185 486 501 CUUGACGGA-AAGAGAGGU |||| ||||:||| ----GGCCUUUUCUUUCCC Cbx4; Pc2 mmu-miR-190 361 380 UGGAUUAUAUAGUUUGUAUAGU ||:|||||| |||||| -GCUGAUAUAUAU-ACAUAUA- Cbx4; Pc2 mmu-miR-194 583 612 AGGUGUACCUCAACGACA-------AUGU- |||||||: ||:||| |:|| -ACACAUGGGUGUGUUGUUUCUAUGUGCAA Cbx4; Pc2 mmu-miR-195 631 662 -CGGUUA-UAAAGAC-------ACGACGAU- ||:|| | ||| |||||||| GGCUAAAGAGCUCUCUAGAACCUGCUGCUAU Cbx4; Pc2 mmu-miR-199a* 272 292 UUGGUUACACGUCUGA--UGACAU :||| |||| |||| ||| -GUCAA-GUGCUGACUCUACUC-- Cbx4; Pc2 mmu-miR-214 124 154 GACGGACAGA-----------CACGGACGACA- |||||| |||||||| || ---ACUGUCUCCUUCCACGUGGUGCCUGCGGUC Cbx4; Pc2 mmu-miR-24 169 193 GACAAGGA----CGACUUGACUCGGU |||| | || ||||||| --CUUCCCUAUAGGAGACCUGAGCCU Cbx4; Pc2 mmu-miR-24* 322 346 -UGACUAUAGUCGAGUCAUCCGUG- |:|| | ||||||| |||| | UAUUGUU-UGAGCUCAGAAGGCCCG Cbx4; Pc2 mmu-miR-27b 178 204 -CGUCUUGAAUCGGU---GACACUU- | ||| || |||| |||||:| AGGAGACCUGAGCCUUCCCUGUGGAC Cbx4; Pc2 mmu-miR-28 624 648 GAGUUAUCUGACA-CUCGAG-GAA |:|| ||:|| |||||| || GUUAAAAGGCUAAAGAGCUCUCUA Cbx4; Pc2 mmu-miR-296 48 85 UGUCCUAACU---------------CC-CCC--CCGGGA- |||| || || || |||||| -AAGGA--GAAAACGCCCCAGUCGCGGUGGCCAGGCCCUU Cbx4; Pc2 mmu-miR-29a 290 312 UUGGCUAAA-GUCUACCACGAU- |||:||| :| :|||||:|| -UCCGGUUUGUACGUGGUGUUAU Cbx4; Pc2 mmu-miR-29b 122 147 UUGUGACUA---AAGUU-UACCACGAU ||||| ||| :|||||| -UCACUGUCUCCUUCCACGUGGUGCC- Cbx4; Pc2 mmu-miR-29c 290 312 UGGCUAAAGUU-UACCACGAU- |||:||| | :|||||:|| UCCGGUUUGUACGUGGUGUUAU Cbx4; Pc2 mmu-miR-300 69 88 CUUCUCUCGAA-CGGGAACGUAU |: :|| |||||||| --CGGUGGCCAGGCCCUUGCU-- Cbx4; Pc2 mmu-miR-301b 67 98 ACGAAACUGUUAUGGUAACGU------GAC- || ||:| :|| |||| ||| CGCGGUGGCCAGGCCCUUGCUCACUCCCUGG Cbx4; Pc2 mmu-miR-320 13 33 AAGCGGGAGAG-UUGGGUCGAAAA ||||| || :||:|||| -GCGCCCACUAGGACUCAGCA--- Cbx4; Pc2 mmu-miR-324-3p 215 236 -GGUCGUCGUGGACCCCGUCACC || ||||| || | |||||| ACCCGCAGC-CCCGAGGCAGUC- Cbx4; Pc2 mmu-miR-324-5p 73 102 GUGGUUACGGGAUC----------CCCUACGC :|||: ||||| ||||| GGCCAG-GCCCUUGCUCACUCCCUGGGAUC-- Cbx4; Pc2 mmu-miR-325 17 44 UGUGAA--UGACUCGUGGAUGA-UCC- |||| ||| ||||||||| ||| CCACUAGGACUCAGCACCUACAGAGGU Cbx4; Pc2 mmu-miR-326 1 26 UGACCUCCUUCC------CGGGUC-UCC- :|||||| ||||| ||| ----UGGGAAGGAGUCGCGCCCACUAGGA Cbx4; Pc2 mmu-miR-329 587 599 UUUUUCCAAUCGACCCACACAA- |||||||||| -----------AUGGGUGUGUUG Cbx4; Pc2 mmu-miR-337 336 367 -UUUCCG------UAGUAU--AUCCUCGACUU :||||| ||| |||| ||||| AGAAGGCCCGACUAUCCCCCUUAGG-GCUGAU Cbx4; Pc2 mmu-miR-341 71 111 UGACUGG-CUGG---------------CU---GGCUAGCU ||:|| |:|| |: |||||:|| -GUGGCCAGGCCCUUGCUCACUCCCUGGGAUCCCGAUUGAG Cbx4; Pc2 mmu-miR-345 12 34 -CGUGACCUGAUCCCCAGUCGU- ||:| |||||| |||||| CGCGCCC-ACUAGGACUCAGCAC Cbx4; Pc2 mmu-miR-351 331 363 GUCCGAGUUUCCCGA----------GGAGUCCCU |||||:| ||| |||:|||| --AGCUCAGAAGGCCCGACUAUCCCCCUUAGGGC Cbx4; Pc2 mmu-miR-362 26 54 AAGU-GUGGA----UCCAAGG-UUCCUAA ||| ||||| ||||||| ||||| CUCAGCACCUACAGAGGUUCCCAAGGAG- Cbx4; Pc2 mmu-miR-363 581 613 AAUGUCUACCUAUG----------GCACGUUA |||| ||||:|: :|||||| GUACACAUGGGUGUGUUGUUUCUAUGUGCAAA Cbx4; Pc2 mmu-miR-369-3p 226 255 -UUCU-----AGU--UGGUA-CAUAAUAA :||: ||| :|:|| ||||||| CGAGGCAGUCUCAGAGCUAUAGUAUUAUA Cbx4; Pc2 mmu-miR-370 31 82 UUGG-----UCCAAGG------------UGGGGUCG---- UCCG ||| ||||||| :||||||: |||| CACCUACAGAGGUUCCCAAGGAGAAAACGCCCCAGUCGCGGUGGCCAGGCC Cbx4; Pc2 mmu-miR-376a 431 450 UGCACCUAAAAGGAGAUGCUA- |||| ||||||||| ||| --AUGGAGUUUCCUCUA-GAUC Cbx4; Pc2 mmu-miR-379 130 161 -GGA---UGCAA---GGUA-UCAGA-UGGU- ||| |||| || :|||| |||: UCCUUCCACGUGGUGCCUGCGGUCUCACCGC Cbx4; Pc2 mmu-miR-423 226 250 GACUCCC-CGGAGUCUGGC--UCGA |||| |:|||||| | ||: -CGAGGCAGUCUCAGAGCUAUAGUA Cbx4; Pc2 mmu-miR-424 643 661 -AGGUUUUGUACUUAACGACGAC ||:|:||| ||||||| CUCUAGAACC-----UGCUGCUA Cbx4; Pc2 mmu-miR-425 67 108 CCGCCUGUG--CUGU--A---------------AGGGCUA |||| :| |:| | ||||||| CGCGGUGGCCAGGCCCUUGCUCACUCCCUGGGAUCCCGAUU Cbx4; Pc2 mmu-miR-429 228 254 UGCCGUAAUGGUCU----GUCAUAAU- |||| :|||| :||||||| -AGGCAGUCUCAGAGCUAUAGUAUUAU Cbx4; Pc2 mmu-miR-433-5p 138 161 CUUAUUAC---UGUCCGAGUGGCAU :|::|| :|:| ||||||| -CGUGGUGCCUGCGGUCUCACCGC- Cbx4; Pc2 mmu-miR-448 586 613 -UACCCUGU-----AGGAUGUAUACGUU- ||||| |:|||: :||||| CAUGGGUGUGUUGUUUCUAU--GUGCAAA Cbx4; Pc2 mmu-miR-450b 535 549 AUAAGUCCUUGUAUGACGUUUU ||||| |||||:| ---CCAGGA----ACUGCGAC- Cbx4; Pc2 mmu-miR-450b* 29 51 UACGUAC--GUUUUACAAGGGUUA ||| ||:|: |||||||| -AGCACCUACAGAG-GUUCCCAAG Cbx4; Pc2 mmu-miR-455-3p 138 158 UCACAUAUACGGGCACCUGACGUA ||| :||||:| || || || CGUG---GUGCCUGCGGUCU-CAC Cbx4; Pc2 mmu-miR-464 531 566 AUAGAGUGUCU-------------UAUUUGAACCAU- |||| |||: :||| ||||||| -UUCUC-CAGGAACUGCGACACCAGUAACCUUGGUAU Cbx4; Pc2 mmu-miR-468 206 237 -GUC-UGUGUGCGUGUA--------GUCAGUAU ||| || || |:|| ||||| CCAGAACUGACCCGCAGCCCCGAGGCAGUCU-- Cbx4; Pc2 mmu-miR-483 1 13 UGUUCUGCCCUCCCCUCCUCACU :|||| |||||| ------UGGGA----AGGAGUC- Cbx4; Pc2 mmu-miR-484 178 194 UAGCCCUCCCCUGACUCGGACU |||| |||||||| ---AGGAGAC--CUGAGCCUU- Cbx4; Pc2 mmu-miR-489 278 314 -CGAC--------GGU---AUAUACACCACAGUAA- |||| ||: |:|| |||||||:||| UGCUGACUCUACUCCGGUUUGUACGUGGUGUUAUUC Cbx4; Pc2 mmu-miR-491 2 23 GGAGUACCUUCC-CAA-G-GGGUGA- |||||| || | |||||| -----GGGAAGGAGUCGCGCCCACUA Cbx4; Pc2 mmu-miR-497 576 602 -AUGUUUGGUG---UCACACGACGAC ||| ||| :|||||:||:| AUACUGUACACAUGGGUGUGUUGUUU Cbx4; Pc2 mmu-miR-501* 129 147 GUUUAGGAACGG-GC-CCACGUAA ||||| || || ||||| ---CUCCUU-CCACGUGGUGCC-- Cbx4; Pc2 mmu-miR-503 639 662 -CGUCAUGA-CAAGGGCGACGAU- || || | ||:||||||| AGCUCU-CUAGAACCUGCUGCUAU Cbx4; Pc2 mmu-miR-505 264 286 UCUUUUGGUCGUUCACAACUGC | |||:: |||||| |||| UGCUAACUGUCAAGUGCUGACU Cbx4; Pc2 mmu-miR-541 70 105 ACACUGGU-----------UGUAG---UCUUAGGGAA |||:||| || || :|:||||| GGUGGCCAGGCCCUUGCUCAC-UCCCUGGGAUCCCG- Cbx4; Pc2 mmu-miR-542-5p 212 231 GCACUGUACUACUAGGGGCUC- |||| | ||||||| -CUGACCCGCAG--CCCCGAGG Cbx4; Pc2 mmu-miR-665 177 203 AUUCC-CUGGAGUCGGAGG----ACCA ||| ||||| |||||:| ||| -UAGGAGACCUGAGCCUUCCCUGUGGA Cbx4; Pc2 mmu-miR-666 118 151 CCGAGAGUGUCGA------------CACGGGCGA ||||||| |: |||||:|| -CCUCUCACUGUCUCCUUCCACGUGGUGCCUGCG Cbx4; Pc2 mmu-miR-671 332 365 GGAGG---UCGGGG----AGG-----UCCCGAAGGA ||| :|||| ||| |||||| GCUCAGAAGGCCCGACUAUCCCCCUUAGGGCUG--- Cbx4; Pc2 mmu-miR-673 45 76 GAGGUUCCU---------GGUCU-CGACACUC ||||||| |||| || |||: -CCCAAGGAGAAAACGCCCCAGUCGCGGUGGC Cbx4; Pc2 mmu-miR-674* 93 116 AACAAGACUCUACC-----CUCGACAC |||:||| |||:||| ----CCUGGGAUCCCGAUUGAGUUGUC Cbx4; Pc2 mmu-miR-675-5p 138 161 UGACACC-CGGGAA--AGGCGUGGU- |||| |||: ||: ||||: --CGUGGUGCCUGCGGUCU-CACCGC Cbx4; Pc2 mmu-miR-678 202 233 -GGAGGUCAGGAA----CGU---GGCUCUG- || |||| || ||| |||||:| ACCACCAGAACUGACCCGCAGCCCCGAGGCA Cbx4; Pc2 mmu-miR-679 101 132 UGGUU--CUCA----GUGG--AGUGUCAGG- ||:| |||| |||| |||| |||: CCCGAUUGAGUUGUCCACCUCUCACUGUCUC Cbx4; Pc2 mmu-miR-681 211 233 UCGAC-GGA---CGGUCGCUCCGAC ||| || ||| |||||| -ACUGACCCGCAGCCC-CGAGGCA- Cbx4; Pc2 mmu-miR-682 131 153 GUCUGAA-GUGA--CACUGACGUC- ||| ||| ||| ||||:| ---CCUUCCACGUGGUGCCUGCGGU Cbx4; Pc2 mmu-miR-683 21 44 CUCCUGUGUCGA--AUGUCGUCC- ||||| |||| ||||| ||| UAGGACUCAGCACCUACAG-AGGU Cbx4; Pc2 mmu-miR-688 138 153 CUUAUUCAUCAGCGGACGCU- ||:|| |||||||: -----CGUGGU-GCCUGCGGU Cbx4; Pc2 mmu-miR-689 58 82 CCUGGGG-CGGC-UCGCCC--CUGC :|||| |:|| :|:|| |:| -CGCCCCAGUCGCGGUGGCCAGGCC Cbx4; Pc2 mmu-miR-691 523 543 AAAAGACGGAGAGAAGUCCUUA |||| |:|||| |||||| AUUUCCCCUUCUC--CAGGAAC Cbx4; Pc2 mmu-miR-692 38 56 CUCACUCCGCGAGUUUCUCUA ||||: | |||:|||| ---AGAGGUUCCCAAGGAGAA Cbx4; Pc2 mmu-miR-693-3p 218 245 AAUGUCGG-----UGU-AGACUUUCGACG :||||| :|| ||| |:|||| -CGCAGCCCCGAGGCAGUCUCAGAGCUA- Cbx4; Pc2 mmu-miR-699 141 163 GCUCGGU--CCAGCGUGACGGA | ||| |||| ||| ||| GGUGCCUGCGGUCUCACCGCCA Cbx4; Pc2 mmu-miR-705 111 140 -ACGGGUGGGGU--------GGAGGGUGG ||:|||||:| |||:|||| UUGUCCACCUCUCACUGUCUCCUUCCACG Cbx4; Pc2 mmu-miR-709 119 151 AGGAG-GACGGAG-----------ACGGAGG- :||| |||:||| ||||| | CUCUCACUGUCUCCUUCCACGUGGUGCCUGCG Cbx4; Pc2 mmu-miR-711 81 105 -GAAUGUAGAGAGGGGCCC-AGGG- |||:| || |||||:||| |||| CCUUGC-UCACUCCCUGGGAUCCCG Cbx4; Pc2 mmu-miR-714 67 90 -CGCUGGCUGG-CCGGGAGC-AGC ||| |:|| ||||||:| || CGCGGU-GGCCAGGCCCUUGCUCA Cbx4; Pc2 mmu-miR-718 56 76 GCUGUGGGC-CGGC-CCGCCUUC ||:||| |:|| ||:|| -AACGCCCCAGUCGCGGUGGC-- Cbx4; Pc2 mmu-miR-742 60 77 AAAUGGGUC-GUACCACCGAAAG ||||| |: |||||| ---CCCCAGUCGCGGUGGCC--- Cbx4; Pc2 mmu-miR-744 67 88 -CGACAAUCGGGAUCGGGG-CGU || |:||| :||||: || CGCGG-UGGCCA-GGCCCUUGCU Cbx4; Pc2 mmu-miR-761 619 660 ACACAGUCAA---------------AGUG-----GGACGACG ||: ||| || |||||||| --AGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAACCUGCUGCU Cbx4; Pc2 mmu-miR-762 211 239 CGAGACAGGGC--CGGGG-----UCGGGG- ||| |||| ||||| ||:|:| --ACUGACCCGCAGCCCCGAGGCAGUCUCA Cbx4; Pc2 mmu-miR-764-3p 108 135 UGUCAAC-GGUGAUAC----CGGAGGA- ||||| |||| |:||||| -GAGUUGUCCACCUCUCACUGUCUCCUU Cbx4; Pc2 mmu-miR-764-5p 5 36 -UCCU-------------CCUGUACACUCGUGG- |||| |||| |||||| AAGGAGUCGCGCCCACUAGGACUC---AGCACCU Cbx4; Pc2 mmu-miR-770-3p 61 87 -GGUCGAGGUGCA----GUCCGGGUGC- ||||: |:|| ||||||| | CCCAGU--CGCGGUGGCCAGGCCCUUGC Cbx4; Pc2 mmu-miR-9 34 54 GUAUGUCGAUCUAUUGGUUUCU- ||||| ||:| ||||:|| -CUACAG--AGGUUCCCAAGGAG Cbx4; Pc2 mmu-miR-99b 291 309 GCGUUCCAGCCAAG-AUGC-CCAC- |||||: |||| |||| -------CCGGUUUGUACGUGGUGU Cbx4; Pc2 mmu-miR-136 716 723 ---AGGU-AGUAGUUUU----------------GUUUACCUCA |||| |:||:| :|||||||| GCUUCCAAUUAUUACCUGCUUGAAUGUAAAUAUUAAAUGGAGA Cbx4; Pc2 mmu-miR-144 576 583 ------------------GAUCAUGUAGU--AGA-UAUGACAU :|:|||:|| |:| |||||||| ACUGCGACACCAGUAACCUUGGUAUAUAUUUUUUGAUACUGUAC Cbx4; Pc2 mmu-miR-15a 653 660 GUG---------------------------UUUGGUAAUACACGACGAU :|||| |||||||| AAGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAACC------UGCUGCUAU Cbx4; Pc2 mmu-miR-15b 653 660 ACA---------------------------UUUGGUACUACACGACGAU :|||| |||||||| AAGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAACC------UGCUGCUAU Cbx4; Pc2 mmu-miR-195 653 660 ----------------------CGGUUAUAAAGACACGACGAU ||: |||||||| AAGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAACCUGCUGCUAU Cbx4; Pc2 mmu-miR-214 651 658 GA----------------------CGGACAGA-CACGGACGACA ||: ||| | ||||||| AAAAGUUUGUUAAAAGGCUAAAGAGCUC-UCUAGAACCUGCUGC Cbx4; Pc2 mmu-miR-24 185 192 GAC-----------------AAGGACGA--CUU--GACUCGGU |||| ||: ||||||| GGUCUCACCGCCACGUCCCCUUCCCUAUAGGAGACCUGAGCCU Cbx4; Pc2 mmu-miR-329 590 597 UUUUUCCAAUCG---------------------ACCCACACAA |||||||||| AACCUUGGUAUAUAUUUUUUGAUACUGUACACAUGGGUGUGUUG Cbx4; Pc2 mmu-miR-369-3p 247 254 UUCU--------------------AGU--UGGUA-CAUAAUAA ||| :|:|| ||||||| CUGACCCGCAGCCCCGAGGCAGUCUCAGAGCUAUAGUAUUAUA Cbx4; Pc2 mmu-miR-424 653 660 --------------------------AGGUUUUGUACUUAACGACGAC ||:|:||| ||||||| AAGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAACC-----UGCUGCUA Cbx4; Pc2 mmu-miR-450b* 43 50 UA--------------------CGUAC--GUUUUACAAGGGUUA ||| ||:|: |||||||| GAGUCGCGCCCACUAGGACUCAGCACCUACAGAG-GUUCCCAAG Cbx4; Pc2 mmu-miR-688 144 151 CUUAUU------------------------CAUCAGCGGACGCU ||:| :|||||||: AGUUGUCCACCUCUCACUGUCUCCUUCCACGUGG-UGCCUGCGGU Cbx4; Pc2 mmu-miR-761 651 658 ACAC----------------------AGUCAAAGUGGGACGACG || |||||||| AAAAGUUUGUUAAAAGGCUAAAGAGCUCUCUAGAA-CCUGCUGCU Cbx4; Pc2 mmu-miR-101b 264 284 gaagUCGAUAGUGUCAUGACau | ||:||| |||:||| tgctAACTGTCA-AGTGCTGac Cbx4; Pc2 mmu-miR-103 635 659 agUAUCGGGACAUGU--UACGACGA | |||:|| || | ||||||| aaAGAGCTCTCTAGAACCTGCTGCT Cbx4; Pc2 mmu-miR-107 635 659 acUAUCGGGACAUGU--UACGACGA | |||:|| || | ||||||| aaAGAGCTCTCTAGAACCTGCTGCT Cbx4; Pc2 mmu-miR-122a 75 94 uGUUUGUGGUAACAGUGUGAGGu ||::| || ||| | |||||| cCAGGC-CC-TTG-CTCACTCCc Cbx4; Pc2 mmu-miR-124a 129 149 ccGUAAGUGGCG-CACGGAau | ||| ||: |||||| ctCCTTCCACGTGGTGCCTgc Cbx4; Pc2 mmu-miR-125a 218 242 GUGUCCAAUUUCC--CAGAGUCCCu |:||| :||| ||||||| | CGCAGCCCCGAGGCAGTCTCAGAGc Cbx4; Pc2 mmu-miR-125b 223 242 aGUGUUCAAUCCCAGAGUCCCu | |:|| | ||||||| | cCCCGAGGCA--GTCTCAGAGc Cbx4; Pc2 mmu-miR-128a 176 201 UUUUCUCUGGCC----AAGUGACACu | |:|||||| | ||| ||||| ATAGGAGACCTGAGCCTTCCCTGTGg Cbx4; Pc2 mmu-miR-128b 176 201 cuUUCUCUGGCC----AAGUGACACu |:|||||| | ||| ||||| atAGGAGACCTGAGCCTTCCCTGTGg Cbx4; Pc2 mmu-miR-134 215 238 gGGGAGACCAG--UUGGUCAGUGU ||| | | | |: ||||| || aCCCGCAGCCCCGAGGCAGTCTCA Cbx4; Pc2 mmu-miR-138 539 555 CUAAGUGUUGUGGUCga || ::|:||||||| GAACTGCGACACCAGta Cbx4; Pc2 mmu-miR-140* 183 203 aGGCACCAAGAUGGGACACCau || || || |||||||| aCC-TGAGCCTTCCCTGTGGac Cbx4; Pc2 mmu-miR-144 559 583 gAUCAUGUAGUAGA---UAUGACAU |:|||:|| |:| |||||||| tTGGTATATATTTTTTGATACTGTA Cbx4; Pc2 mmu-miR-149 57 79 ccucacuUCUGUGCC-UCGGUCu || |:||| :||||| acgccccAGTCGCGGTGGCCAGg Cbx4; Pc2 mmu-miR-151 223 238 GGAGUUCCUCGGAGUCAGAuc || |:||| |||||| CCCCGAGG-----CAGTCTca Cbx4; Pc2 mmu-miR-15a 639 660 guguuuGGUAAUACACGACGAU |:| | |||||||| agctctCTAGAACCTGCTGCTA Cbx4; Pc2 mmu-miR-15b 644 660 ACAU-UUGGUACUACACGACGAU | || |||| |||||||| TCTAGAACC------TGCTGCTA Cbx4; Pc2 mmu-miR-15b 580 601 ACAUUUGGUA-CUACACGACGAu |||| | ||| |:||||:||:| TGTACA-CATGGGTGTGTTGTTt Cbx4; Pc2 mmu-miR-16 289 310 GCGGUUAUAAAUGCACGACGAU | ||::| | |||||| ||:|| CTCCGGTTTGTACGTGGTGTTA Cbx4; Pc2 mmu-miR-17-3p 272 295 auGUUCACGG--GAG-UGACGUCA |||||||: ||| ||| |:|| gtCAAGTGCTGACTCTACTCCGGT Cbx4; Pc2 mmu-miR-18 12 37 auagacGUGAUCU--A--CGUGGAau ||||||: | |||||| cgcgccCACTAGGACTCAGCACCTac Cbx4; Pc2 mmu-miR-184 114 137 uGG-GAAUAGUCA-AGAGGCAGGU || | | ||| | ||||| |||| tCCACCTCTCACTGTCTCCTTCCA Cbx4; Pc2 mmu-miR-185 481 500 cUUGAC--GGAAAGAGAGGu |::|| |:|||||:||| aAGTTGGCCTTTTCTTTCCc Cbx4; Pc2 mmu-miR-190 360 380 ugGAUUAUAUAGUUUGUAUAgu ||:|||||| | |||||| ggCTGATATAT-ATACATATat Cbx4; Pc2 mmu-miR-194 582 603 AGGUGUACCUCAACGACAAUGu | |||||||: ||:|||| | TACACATGGGTGTGTTGTTTCt Cbx4; Pc2 mmu-miR-199a* 268 293 UUG---GUUACACGUCU--GAUGAcau ||| ||| |||| || ||||| AACTGTCAA-GTGCTGACTCTACTccg Cbx4; Pc2 mmu-miR-214 637 658 gacgGACAGA-CACGGACGACa || ||| | ||||||| agagCTCTCTAGAACCTGCTGc Cbx4; Pc2 mmu-miR-214 132 152 GACGGACAGACACGGACGACA || || : |||||||| || CTTCCACGTGGTGCCTGCGGT Cbx4; Pc2 mmu-miR-24 169 192 GACAAGGA---CGACUUGACUCGGu || | ||| | || ||||||| CT-TCCCTATAGGAGACCTGAGCCt Cbx4; Pc2 mmu-miR-24* 323 344 UGACUAUAGUCGAGUCAUCCGug |:|| | | ||||||| |||| ATTG-TTTGAGCTCAGAAGGCcc Cbx4; Pc2 mmu-miR-27b 179 202 CGUCUUGAAUCG---GUGACACUU | ||| || ||| | |||||:| GGAGACCTGAGCCTTCCCTGTGGA Cbx4; Pc2 mmu-miR-293 135 158 uGUGAUGUUUGAGACGCC---GUGa ||| : :| |||||| ||| cCACGTGGTGC-CTGCGGTCTCACc Cbx4; Pc2 mmu-miR-296 62 83 uGUCCUAACUCCCCC---CCGGGA ||| | | || || |||||| cCAG--TCGCGGTGGCCAGGCCCT Cbx4; Pc2 mmu-miR-298 178 202 cCUUCUUG--UCGGGA-GGAGACgg |:||| | ||||:| ||| || aGGAGACCTGAGCCTTCCCTGTGga Cbx4; Pc2 mmu-miR-29a 289 310 uuGGCUAAA-GUCUACCACGAU |||:||| :| :|||||:|| ctCCGGTTTGTACGTGGTGTTA Cbx4; Pc2 mmu-miR-29b 121 147 uuGUGAC----UAAAGUUUACCACGau ||||| || || :|||||| ctCACTGTCTCCTTCCACGTGGTGCct Cbx4; Pc2 mmu-miR-300 68 89 CUUCUCUCGAACGGGAACGuau | :| |: | |||||||| GCGGTGGCCAGGCCCTTGCtca Cbx4; Pc2 mmu-miR-320 12 35 aaGCGGGAGA-GUUGGGUCGaaaa ||||| || :||:|||| cgCGCCCACTAGGACTCAGCacct Cbx4; Pc2 mmu-miR-324-3p 216 236 GGUCGUCGUGGACCCCGUCAcc || ||||| || | |||||| CCCGCAGC-CCCGAGGCAGTct Cbx4; Pc2 mmu-miR-324-5p 85 103 gugGUUACGGGAUCCCCUACGc || | |||| ||||| | gctCACT-CCCT--GGGATCCc Cbx4; Pc2 mmu-miR-326 19 42 UGA-CCUCCUUCCCGG--GUCUCC ||| ||| || || |||||| ACTAGGACTCAGCACCTACAGAGG Cbx4; Pc2 mmu-miR-329 576 597 uuuuuccaaucgACCCACACAA |||||||||| atactgtacacaTGGGTGTGTT Cbx4; Pc2 mmu-miR-337 337 366 uUUCCG---UAGUA----UAUCCUCGACUu ||||| | :|| | |:||||| gAAGGCCCGACTATCCCCCTTAGGGCTGAt Cbx4; Pc2 mmu-miR-341 93 109 uGACUGGCUGGCUGGCUAGCU |||: ||:| |||||:|| cCTGG--GATC--CCGATTGA Cbx4; Pc2 mmu-miR-345 13 32 CGUGACCUGAUCCCC--AGUCGU ||:| |||| || |||||| GCGC-CCACTA--GGACTCAGCA Cbx4; Pc2 mmu-miR-351 329 362 gucCGAGU-UUCC---C-GA-----GGAGUCCCu ||||| |||| | || |||:|||| tgaGCTCAGAAGGCCCGACTATCCCCCTTAGGGc Cbx4; Pc2 mmu-miR-362 26 54 aAGU-GUGGA----UCCAA-GGUUCCUaa ||| ||||| ||||| ||||||| cTCAGCACCTACAGAGGTTCCCAAGGAga Cbx4; Pc2 mmu-miR-370 18 43 uUGGUCC-AAG--GUGGG-GUCGUCCg ||:||| || ||||: ||| ||| cACTAGGACTCAGCACCTACAG-AGGt Cbx4; Pc2 mmu-miR-376a 429 448 ugcACCUAAAAGGAGAUGCUA |||| ||||||||| ||| ttaTGGAGTTTCCTCTA-GAT Cbx4; Pc2 mmu-miR-379 131 159 GGA---UGCA--AGGUA--UCAGA-UGGu ||| |||| | | | :|||| ||| CCTTCCACGTGGTGCCTGCGGTCTCACCg Cbx4; Pc2 mmu-miR-423 246 267 gacuccccggagucUGGCUCGA |||| ||| agtattatattttaACCGTGCT Cbx4; Pc2 mmu-miR-423 212 231 GACUCCCCGGAGUC-UGGCUCga |||| || ||| ||||| CTGA---CCCGCAGCCCCGAGgc Cbx4; Pc2 mmu-miR-425 86 106 ccgccugugcuguaAGGGCUA ||||||| ctcactccctgggaTCCCGAT Cbx4; Pc2 mmu-miR-429 227 252 ugCCGUAAUGGUC----UGUCAUAAU |||| | :||| |:||||||| gaGGCAGTCTCAGAGCTATAGTATTA Cbx4; Pc2 mmu-miR-433-5p 137 161 cuuAUUAC---UGUCCGAGUGGCau |::|| :|:| ||||||| acgTGGTGCCTGCGGTCTCACCGcc Cbx4; Pc2 mmu-miR-448 587 611 UACCC-UGUA--GGAUGUAUACGUU ||||| :::| ::| :||:||||| ATGGGTGTGTTGTTTCTATGTGCAA Cbx4; Pc2 mmu-miR-450b 532 549 AUAAGUCCUUGUAUGACGUUuu | | ||||| |||||:| TCTCCAGGA----ACTGCGAca Cbx4; Pc2 mmu-miR-450b* 28 50 uaCGU--ACGUUUUACAAGGGUUa ||| | ||:|: |||||||| caGCACCTACAGAG-GTTCCCAAg Cbx4; Pc2 mmu-miR-455-3p 124 151 UCACAUA-UACGG-GCAC--CUGACGua | ||| | | || |||| | |||| ACTGTCTCCTTCCACGTGGTGCCTGCgg Cbx4; Pc2 mmu-miR-464 543 564 auagaGUGUCUUAUUUGAACCAU ||| |:||| ||||||| tgcgaCAC-CAGTAACCTTGGTA Cbx4; Pc2 mmu-miR-468 212 238 GUCUGUGUG-CGUG---UAGUCAGuau | ||| |:| || | : ||||| CTGACCCGCAGCCCCGAGGCAGTCtca Cbx4; Pc2 mmu-miR-483 1 13 uguucugcccuCCCCUCCUCAcu ||| |||||| ----------tGGGAAGGAGTcg Cbx4; Pc2 mmu-miR-484 172 194 uagcccUCCCCU-GACUCGGAcu ||| || |||||||| ccctatAGGAGACCTGAGCCTtc Cbx4; Pc2 mmu-miR-489 290 312 cGACGGUAUAUACACCACAGUAA | | : |:|| |||||||:||| tCCGGTTTGTACGTGGTGTTATT Cbx4; Pc2 mmu-miR-491 1 21 ggaguaCCUUCCCAAG---GGGUGA |||||| || |||||| ----tgGGAAGGAGTCGCGCCCACT Cbx4; Pc2 mmu-miR-497 577 601 AUGUUUGGUGU---CACACGACGAc ||| : |||| |||||:||:| TACTGTACACATGGGTGTGTTGTTt Cbx4; Pc2 mmu-miR-501* 126 148 guuuAGGAACGGGC-CCACGUAa ||||| | || ||||| | tgtcTCCTTCCACGTGGTGCCTg Cbx4; Pc2 mmu-miR-503 640 660 CGUCAUGACAAGGGCGACGAU || | : | ||:||||||| GCTCTCTAGAACCTGCTGCTA Cbx4; Pc2 mmu-miR-542-5p 211 229 gcACUGUACUACUAGGGGCUC |||| | | ||||||| acTGACCCGCAG--CCCCGAG Cbx4; Pc2 mmu-miR-666 130 150 ccGAGAGUGUCGACACGGGCGa ||: ||| |: |||||:|| tcCTTCCAC-GTGGTGCCTGCg Cbx4; Pc2 mmu-miR-671 343 367 GG-AGGUCGGGGAGGUCCCGAagga || |:| |||| ::|||||| CCGACTATCCCCCTTAGGGCTgata Cbx4; Pc2 mmu-miR-673 44 75 gaGGUUCCU---------GGUC-UCGACACuc ||||||| |||| || ||| tcCCAAGGAGAAAACGCCCCAGTCGCGGTGgc Cbx4; Pc2 mmu-miR-674* 89 115 aacaaGACUCUA---C--CCUCGACAc |||:||| | |||:||| actccCTGGGATCCCGATTGAGTTGTc Cbx4; Pc2 mmu-miR-675-5p 145 165 uGACACCCGGGAAAGGC-GUGgu ||| || |:| ||| ||| cCTGCGGTCTC--ACCGCCACgt Cbx4; Pc2 mmu-miR-678 203 231 GGAGGUCAGGA-------ACGUGGCUCUG || |||| || || |||||:| CCACCAGAACTGACCCGCAGCCCCGAGGC Cbx4; Pc2 mmu-miR-681 210 233 UCGAC-GGACG--GUCGCUCCGac | ||| || || | |||||| AACTGACCCGCAGCCCCGAGGCag Cbx4; Pc2 mmu-miR-682 128 151 gucuGAA-GUG-A-CACUGACGUC ||| ||| | ||| ||||:| tctcCTTCCACGTGGTGCCTGCGG Cbx4; Pc2 mmu-miR-688 133 151 cuuaUUCAUCAGCGGACGCu | ||:|| ||||||| ttccACGTGGT-GCCTGCGg Cbx4; Pc2 mmu-miR-692 35 55 cucaCUCCGCGAGUUUCUCUa ||||: | |||:|||| tacaGAGGTTCCCAAGGAGAa Cbx4; Pc2 mmu-miR-693-3p 217 245 aauGUCGG-----UGU-AGACUUUCGAcg ||||| :|| ||| |:|||| ccgCAGCCCCGAGGCAGTCTCAGAGCTat Cbx4; Pc2 mmu-miR-705 112 139 ACGGGUG--GGGU------GGAGGGUGg ||:|||| |:|| |||:|||| TGTCCACCTCTCACTGTCTCCTTCCACg Cbx4; Pc2 mmu-miR-709 114 132 AGGAGGACGGAGACGGAGG ||| ||| :| |||:|||| TCCACCTCTCACTGTCTCC Cbx4; Pc2 mmu-miR-709 130 156 AGG-AGG------ACGGA-GACGGAGg ||| ||| ||||| | |:||| TCCTTCCACGTGGTGCCTGCGGTCTCa Cbx4; Pc2 mmu-miR-711 82 103 GAAUGUAGAGAGGGGCCC-AGGG |||:| || |||||:||| |||| CTTGC-TCACTCCCTGGGATCCC Cbx4; Pc2 mmu-miR-714 68 89 CGCUGGCUGGCCGGGAGC-AGc |||:: | | ||||||:| || GCGGTGGCCAGGCCCTTGCTCa Cbx4; Pc2 mmu-miR-718 55 77 gcUGU-GGGCCGGC-CCGCCuuc ||: ||| |:|| ||:|| aaACGCCCCAGTCGCGGTGGcca Cbx4; Pc2 mmu-miR-742 57 79 aaauGGGUC-GUACCACCGaaag ||||| |: |||||| acgcCCCAGTCGCGGTGGCcagg Cbx4; Pc2 mmu-miR-744 68 87 CGACAAUCGGGAUCGGG-GCGu || || | || :|||| :|| GCGGT--GGCCAGGCCCTTGCt Cbx4; Pc2 mmu-miR-761 633 658 acacagUC-AAAG---UGGGACGACG || | || | |||||||| ctaaagAGCTCTCTAGAACCTGCTGC Cbx4; Pc2 mmu-miR-762 209 226 cgaGACAGGGCCGGGGUCGGGG ||| |||| ||||||| gaaCTGACCCG----CAGCCCC Cbx4; Pc2 mmu-miR-764-3p 107 133 ugUCAAC-GGU---GA-UACCGGAGGa ||||| ||| || | |:|||| tgAGTTGTCCACCTCTCACTGTCTCCt Cbx4; Pc2 mmu-miR-764-5p 19 34 uccUCCUGUACACUCGUGG ||||| | |||||| actAGGAC---TCAGCACC Cbx4; Pc2 mmu-miR-770-3p 62 85 GGUC-GAGGUG-CAGUCCGGGugc |||| | | :: | ||||||| CCAGTCGCGGTGGCCAGGCCCttg Cbx4; Pc2 mmu-miR-9 33 52 GUAUGUCGAUCUAUUGGUUUCU | ||||| ||:| ||||:|| CCTACAG--AGGTTCCCAAGGA Cbx4; Pc2 mmu-miR-99b 284 307 GCGUUCCAGCCAAG-AUGC-CCAC | | | |||||: |||| |||| CTCTACTCCGGTTTGTACGTGGTG

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cbx4 RAID00018567 mmu-miR-6419 miRNA MIMAT0025175 Cbx4 mRNA 12418 Prediction 0.2202 Cbx4 RAID00040625 mmu-miR-542-3p miRNA MIMAT0003172 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00072750 mmu-miR-3113-3p miRNA MIMAT0014960 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00078219 mmu-miR-142b miRNA MIMAT0031402 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00079912 mmu-miR-136-5p miRNA MIMAT0000148 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID00092451 mmu-miR-344c-3p miRNA MIMAT0014928 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00295430 mmu-miR-92a-3p miRNA MIMAT0000539 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00301024 mmu-miR-190a-5p miRNA MIMAT0000220 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00400674 mmu-miR-181b-5p miRNA MIMAT0000673 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID00417473 mmu-miR-6396 miRNA MIMAT0025147 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00436555 mmu-miR-6991-3p miRNA MIMAT0027885 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00447503 mmu-miR-92b-3p miRNA MIMAT0004899 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00464999 mmu-miR-511-3p miRNA MIMAT0017281 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00475226 mmu-miR-200c-3p miRNA MIMAT0000657 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID00605808 mmu-miR-543-3p miRNA MIMAT0003168 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00671350 mmu-miR-6983-5p miRNA MIMAT0027868 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00699183 mmu-miR-6346 miRNA MIMAT0025089 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00709425 mmu-miR-344-3p miRNA MIMAT0000593 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID00757030 mmu-miR-144-3p miRNA MIMAT0000156 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6592 Cbx4 RAID00783858 mmu-miR-421-3p miRNA MIMAT0004869 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID00868289 mmu-miR-1192 miRNA MIMAT0005850 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID00898421 mmu-miR-367-3p miRNA MIMAT0003181 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00968903 mmu-miR-99b-5p miRNA MIMAT0000132 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID00993222 mmu-miR-761 miRNA MIMAT0003893 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID01003640 mmu-miR-5127 miRNA MIMAT0020638 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01043828 mmu-miR-101b-3p miRNA MIMAT0000616 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID01076262 mmu-miR-875-5p miRNA MIMAT0004937 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01082776 mmu-miR-590-3p miRNA MIMAT0004896 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01115175 mmu-miR-25-3p miRNA MIMAT0000652 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID01269235 mmu-miR-7222-5p miRNA MIMAT0028412 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01320730 mmu-miR-185-3p miRNA MIMAT0016996 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01333599 mmu-miR-6353 miRNA MIMAT0025096 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01343061 mmu-miR-590-5p miRNA MIMAT0004895 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01366846 mmu-miR-181a-5p miRNA MIMAT0000210 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID01367239 mmu-miR-1907 miRNA MIMAT0007876 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID01399790 mmu-miR-7073-3p miRNA MIMAT0028053 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01441759 mmu-miR-7682-3p miRNA MIMAT0029885 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01505199 mmu-miR-181c-5p miRNA MIMAT0000674 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID01509981 mmu-miR-363-3p miRNA MIMAT0000708 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID01510840 mmu-miR-6980-5p miRNA MIMAT0027862 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01569749 mmu-miR-214-3p miRNA MIMAT0000661 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID01604791 mmu-miR-882 miRNA MIMAT0004847 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01614617 mmu-miR-200b-3p miRNA MIMAT0000233 Cbx4 mRNA 12418 Prediction 0.2381 Cbx4 RAID01618362 mmu-miR-122-5p miRNA MIMAT0000246 Cbx4 mRNA 12418 CLIP-seq 0.5483 Cbx4 RAID01682897 mmu-miR-669e-3p miRNA MIMAT0017330 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01686771 mmu-miR-195a-5p miRNA MIMAT0000225 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID01725926 mmu-miR-6989-5p miRNA MIMAT0027880 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01899143 mmu-miR-16-5p miRNA MIMAT0000527 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID01945850 mmu-miR-429-3p miRNA MIMAT0001537 Cbx4 mRNA 12418 Prediction 0.2381 Cbx4 RAID01959023 mmu-miR-6950-5p miRNA MIMAT0027800 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID01976707 mmu-miR-32-5p miRNA MIMAT0000654 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID02125948 mmu-miR-8107 miRNA MIMAT0031412 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02143032 mmu-miR-466l-3p miRNA MIMAT0005830 Cbx4 mRNA 12418 Prediction 0.2202 Cbx4 RAID02167715 mmu-miR-15b-5p miRNA MIMAT0000124 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID02204150 mmu-miR-193b-3p miRNA MIMAT0004859 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02208178 mmu-miR-505-3p miRNA MIMAT0003513 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02323700 mmu-miR-293-5p miRNA MIMAT0004573 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02368503 mmu-miR-329-3p miRNA MIMAT0000567 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID02497045 mmu-miR-344e-3p miRNA MIMAT0014924 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID02506238 mmu-miR-21a-5p miRNA MIMAT0000530 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID02518400 mmu-miR-190b-5p miRNA MIMAT0004852 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID02546212 mmu-miR-344d-3p miRNA MIMAT0014808 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID02555795 mmu-miR-6416-3p miRNA MIMAT0025171 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02659388 mmu-miR-877-5p miRNA MIMAT0004861 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02717153 mmu-miR-7006-5p miRNA MIMAT0027916 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02755001 mmu-miR-503-5p miRNA MIMAT0003188 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID02802939 mmu-miR-6906-5p miRNA MIMAT0027712 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02835767 mmu-miR-6350 miRNA MIMAT0025093 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID02889923 mmu-miR-34b-5p miRNA MIMAT0000382 Cbx4 mRNA 12418 CLIP-seq 0.5483 Cbx4 RAID02959876 mmu-miR-376c-3p miRNA MIMAT0003183 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID02974382 mmu-miR-101a-3p miRNA MIMAT0000133 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID03024769 mmu-miR-369-3p miRNA MIMAT0003186 Cbx4 mRNA 12418 Prediction 0.2202 Cbx4 RAID03079728 mmu-miR-322-3p miRNA MIMAT0000549 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03103262 mmu-miR-6365 miRNA MIMAT0025109 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03106185 mmu-miR-410-3p miRNA MIMAT0001091 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID03118034 mmu-miR-362-3p miRNA MIMAT0004684 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID03158388 mmu-miR-292a-5p miRNA MIMAT0000369 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID03160468 mmu-miR-7210-3p miRNA MIMAT0028389 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03168489 mmu-miR-880-3p miRNA MIMAT0004844 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03168493 mmu-miR-290a-5p miRNA MIMAT0000366 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6308 Cbx4 RAID03263464 mmu-miR-181d-5p miRNA MIMAT0004324 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID03326199 mmu-miR-322-5p miRNA MIMAT0000548 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID03354355 mmu-miR-1906 miRNA MIMAT0007872 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03400410 mmu-miR-374b-5p miRNA MIMAT0003727 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID03424033 mmu-miR-495-3p miRNA MIMAT0003456 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID03539136 mmu-miR-15a-5p miRNA MIMAT0000526 Cbx4 mRNA 12418 NGS (Next Generation Sequencing)//CLIP-seq//Prediction 0.7353 Cbx4 RAID03549816 mmu-miR-412-5p miRNA MIMAT0017173 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03589578 mmu-let-7a-2-3p miRNA MIMAT0017015 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03792103 mmu-miR-3074-1-3p miRNA MIMAT0014857 Cbx4 mRNA 12418 CLIP-seq 0.5483 Cbx4 RAID03873777 mmu-miR-24-3p miRNA MIMAT0000219 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID03923858 mmu-miR-129-5p miRNA MIMAT0000209 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6559 Cbx4 RAID03937925 mmu-miR-497a-5p miRNA MIMAT0003453 Cbx4 mRNA 12418 CLIP-seq//Prediction 0.6478 Cbx4 RAID03986282 mmu-miR-195b miRNA MIMAT0025076 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID04008261 mmu-miR-340-5p miRNA MIMAT0004651 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID04038145 mmu-miR-6342 miRNA MIMAT0025085 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID04065474 mmu-miR-6912-5p miRNA MIMAT0027724 Cbx4 mRNA 12418 Prediction 0.1828 Cbx4 RAID04627139 G730013B05Rik lncRNA 619312 Cbx4 protein 12418 Microarray//RNA-seq 0.6606