SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3684684 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim60 | Mm_Celera | 8:65005650 | ACTCATGACATGTAG[A/C]TCCAAAATATCTCTC | 234329 |
rs3684804 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim60 | GRCm38.p3 | 8:65005714 | TCCTATAGCATCTGT[A/C]TACACTCATACGGAC | 234329 |
rs3700097 | snp | A/T | 0.498866 | 0.0237825 | intron-variant | Trim60 | GRCm38.p3 | 8:65005905 | CTTTTTATCCAAAAC[A/T]GGTACTACAGGGTGC | 234329 |
rs3706965 | snp | A/C/G | 0.497041 | 0.0383476 | intron-variant | Trim60 | GRCm38.p3 | 8:65009921 | CAGTCTCAGCATCTC[A/C/G]AACTCTACATGGCCA | 234329 |
rs13467111 | snp | G/T | | | stop-gained | Trim60 | Mm_Celera | 8:65001166 | CACAGGAAAGTCCTA[G/T]AGAGCGCCATTGCAA | 234329 |
rs13467112 | snp | A/G | 0.396694 | 0.202437 | synonymous-codon | Trim60 | GRCm38.p3 | 8:65001311 | GGAAGAACACACAGT[A/G]TGTCCGAAGCATGAT | 234329 |
rs13479805 | snp | C/T | 0.499541 | 0.0151446 | missense | Trim60 | GRCm38.p3 | 8:65000838 | TTAAGGTTTTGCAAC[C/T]TGTGGTAGGCTCTCA | 234329 |
rs32539484 | snp | C/T | 0.32 | 0.24 | intron-variant | Trim60 | GRCm38.p3 | 8:65002080 | GGCCAACCATGGTGA[C/T]CTGAGTTCTCTCCAC | 234329 |
rs32569468 | snp | A/T | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65005349 | TCCCTAGCAGGAAAA[A/T]GATAAAACAAAACAA | 234329 |
rs32578786 | snp | A/G | 0.387812 | 0.208586 | intron-variant | Trim60 | GRCm38.p3 | 8:65005081 | ATAGGCCTGGCTAAA[A/G]ACCCGCAGCTGCTTT | 234329 |
rs32611233 | snp | G/T | 0.408163 | 0.193609 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016523 | TAAAAGTGCTTGCAC[G/T]GCAAGCCAGACCACC | 234329 |
rs32636550 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016892 | AGGACGAAATCCTCG[A/C]ACTGTGCAGGGCAGG | 234329 |
rs32657748 | snp | C/T | 0.426035 | 0.177515 | upstream-variant-2KB | Trim61, Trim60 | GRCm38.p3 | 8:65019233 | AGCTAAACCCATTGT[C/T]TCAGAACGAGAGAGA | 234329 |
rs32695463 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim60 | Mm_Celera | 8:65003034 | TCTTGTCTCAAAAAA[A/G]AAAAAAACAAAAACA | 234329 |
rs32739726 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016718 | GGGGTGTGTGGAGGC[A/G]GGGGTACAGACTGGA | 234329 |
rs32793412 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65006553 | AAGAATTGGATCCCC[A/G]GGACCCAGGTGGTGG | 234329 |
rs32796100 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim60 | Mm_Celera | 8:65003261 | CTAATAAAAGTGTTC[C/T]ACTCCACACTACTAC | 234329 |
rs32805667 | snp | A/G | 0.498615 | 0.0262793 | intron-variant | Trim60 | GRCm38.p3 | 8:65005207 | CATCTCTCACAAATA[A/G]GATACCGAGTGGCCT | 234329 |
rs32810097 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65006446 | TCCTACACATAACTG[A/G]AAAAAAAAAATCTAA | 234329 |
rs32848585 | snp | C/G | 0.5 | 0 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65019146 | GCGGTCTGCTGGAGC[C/G]TATCTATTGCCTTAC | 234329 |
rs32858692 | snp | C/G | 0.49827 | 0.0293608 | synonymous-codon | Trim60 | GRCm38.p3 | 8:65000375 | ATCCAAAAATATGCC[C/G]ACCTTGCTGGGTCGC | 234329 |
rs32893126 | snp | C/T | 0.432133 | 0.171253 | intron-variant | Trim60 | GRCm38.p3 | 8:65005583 | CAGGAAGACCAAGAA[C/T]TGTTAAGAGTGTTGG | 234329 |
rs32948765 | snp | A/G | 0.5 | 0 | intron-variant | Trim60 | Mm_Celera | 8:65006509 | AAGATAGTCCAATGG[A/G]TAAGTTGCTGCCTGC | 234329 |
rs32951105 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65016352 | TTGTCAACACCAATA[C/T]GGCAGCTCACAACAG | 234329 |
rs32989795 | snp | A/G | 0.497041 | 0.0383476 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65019111 | CAGAGACACGCCTTA[A/G]TGGGCACCAAGGGAA | 234329 |
rs33034910 | snp | A/C | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65005390 | AGTAAAATACCCCCC[A/C]CCACCACCAAACCAG | 234329 |
rs33060165 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65019880 | GACACACATACAGGC[A/G]AAACACTCAAACATA | 234329 |
rs33075905 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim60 | GRCm38.p3 | 8:65008634 | CCCCCATTTGTTACC[A/C]ACTACCCGTGAGCTA | 234329 |
rs33155073 | snp | A/T | 0.473373 | 0.11227 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65019087 | GTGCCCAGGTGCATC[A/T]CCTCGACCCAGAGAC | 234329 |
rs33231124 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim60 | GRCm38.p3 | 8:65010191 | GGAGGTGAAGGGCAG[A/G]AGTATCAGAAATTCA | 234329 |
rs33258747 | snp | C/T | 0.415225 | 0.187619 | intron-variant | Trim60 | Mm_Celera | 8:65005516 | TAATTAACAATAAAA[C/T]ACCTAGGGCCTGGAG | 234329 |
rs33299213 | snp | A/G | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65006611 | CAGGATGTGGCCCTG[A/G]TGTAGAGACACAGGC | 234329 |
rs33314923 | snp | A/G | 0.459184 | 0.136902 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016611 | GTGAGATGGAAAGTG[A/G]AAGCAGGAGGGTTGG | 234329 |
rs33344445 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016579 | GCAGTGCCTGCCATT[C/T]ATAATCCCACCTCCC | 234329 |
rs33357426 | snp | C/T | 0.375 | 0.216506 | upstream-variant-2KB | Trim61, Trim60 | GRCm38.p3 | 8:65019708 | AATGTGATGTGGTGT[C/T]TGGAGTTGGAGAAAT | 234329 |
rs33420565 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim60 | Mm_Celera | 8:65010473 | TCTGGGGTGAATAGA[C/T]CTTTGTTCCCATATT | 234329 |
rs33430859 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65016543 | GCCAGACCACCTGAG[C/T]TCAATCCCCAGCATA | 234329 |
rs33490430 | snp | A/G | 0.497041 | 0.0383476 | intron-variant | Trim60 | Mm_Celera | 8:65010315 | TGGAAGATTATAAGA[A/G]ACTAAAGGATTGCTG | 234329 |
rs33529055 | snp | C/T | 0.5 | 0 | upstream-variant-2KB | Trim61, Trim60 | GRCm38.p3 | 8:65019130 | GCACCAAGGGAAGAC[C/T]GCGGTCTGCTGGAGC | 234329 |
rs33531646 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65016642 | CTAGAGCTTGAGAGT[C/T]GGGAAGCCTATAGCA | 234329 |
rs33564268 | snp | C/T | 0.5 | 0 | utr-variant-5-prime | Trim60 | GRCm38.p3 | 8:65001690 | GTCCTTCCAAGTCCT[C/T]GTAGGTGTCACTGGT | 234329 |
rs45682408 | snp | A/C | | | downstream-variant-500B, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65012541 | TATGTATACTGCAAT[A/C]AGTGTAAGTGGTGTG | 234329 |
rs45732218 | snp | A/G | 0.165289 | 0.235211 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65015715 | CTGTCCTGCACGAGT[A/G]TGTTCTAGAAGGATC | 234329 |
rs45801591 | snp | A/G | 0.486111 | 0.0821678 | downstream-variant-500B, intron-variant | Trim61, Trim60 | Mm_Celera | 8:65012898 | CTTGGACTACATAGC[A/G]ACACCTTTAAGAAAT | 234329 |
rs45922816 | snp | C/T | 0.497041 | 0.0383476 | intron-variant | Trim60 | Mm_Celera | 8:65012438 | TCCTTAGCTTGCTGT[C/T]ACCTGGGCTGGCATC | 234329 |
rs45931351 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Trim60 | Mm_Celera | 8:65010380 | GTGTTCCAACAGGCA[C/T]ACCCTTAGCTACATG | 234329 |
rs45970292 | snp | A/T | 0.497778 | 0.0332592 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65018804 | ATGGCCGTTTTCATT[A/T]AAAAAAGACAAGTAC | 234329 |
rs46032513 | snp | C/T | 0.5 | 0 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65017609 | AGCTTAAAGCACTTG[C/T]CTTCAAACCTGACAA | 234329 |
rs46122802 | snp | C/T | 0.336735 | 0.234472 | intron-variant | Trim60 | Mm_Celera | 8:65002360 | AAAACTACACACATG[C/T]TCTTGGTCACTTTAC | 234329 |
rs46172468 | snp | G/T | 0.497041 | 0.0383476 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65017681 | ACCCACACTACAAGC[G/T]GTCCTCTGATCTGCA | 234329 |
rs46216406 | snp | C/T | 0.459184 | 0.136902 | synonymous-codon, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014077 | AACCTGGAGGAACAA[C/T]CTATTCTGTTCATAT | 234329 |
rs46231744 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Trim60 | Mm_Celera | 8:65010721 | TGAGCATCTATAACA[A/G]ATATAACAAACCATG | 234329 |
rs46298962 | snp | A/G | 0.497041 | 0.0383476 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65018259 | AAGAGCTGCCACTGA[A/G]CAATCCAATCTTCCA | 234329 |
rs46355157 | snp | A/G | 0.260355 | 0.249785 | downstream-variant-500B | Trim60 | Mm_Celera | 8:64998137 | GGACTAAAAGCACTC[A/G]AAGTAATCCACACAG | 234329 |
rs46376432 | snp | A/G | | | utr-variant-5-prime | Trim61, Trim60 | GRCm38.p3 | 8:65018643 | CTTTGTTCCTGAAGA[A/G]CATCAGGTGGCTTCC | 234329 |
rs46400759 | snp | A/T | 0.142012 | 0.225474 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65015463 | GGCAGCAACACAAGC[A/T]GGTAAAATTGCCCAG | 234329 |
rs46424079 | snp | A/G | 0.473373 | 0.11227 | missense, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014021 | TTGGATAGCCCATCC[A/G]TCTCTTCACTTTGTA | 234329 |
rs46442079 | snp | A/G | 0.165289 | 0.235211 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65019623 | GCCTGAGGCTCTTCT[A/G]GGCTATATCATCATC | 234329 |
rs46481206 | snp | C/T | | | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65018074 | GAGTTTCAGGACAGC[C/T]GGGGAGACAGAGAAA | 234329 |
rs46532011 | snp | A/C | | | intron-variant | Trim60 | Mm_Celera | 8:65012356 | GTTTTGAGACTATGT[A/C]GCCCCAGCCTCTCAA | 234329 |
rs46577229 | snp | A/C/T | 0.260355 | 0.249785 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65017629 | AAACCTGACAACCTG[A/C/T]GCTTAATCCCTGGGA | 234329 |
rs46681924 | snp | A/G | 0.48 | 0.0979796 | synonymous-codon, intron-variant | Trim61, Trim60 | Mm_Celera | 8:65013246 | ATCTGCAACTGTGCA[A/G]ATCTTCAGAGGCTCG | 234329 |
rs46803961 | snp | G/T | | | intron-variant | Trim60 | Mm_Celera | 8:65012292 | CCAAGCCCCATCTAT[G/T]CATGGGTCATAAACA | 234329 |
rs46838995 | snp | C/T | 0.497041 | 0.0383476 | missense, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014055 | GCCCAAGAATCTTCT[C/T]CCGTTCAACCTGGAG | 234329 |
rs46852099 | snp | A/G | | | downstream-variant-500B, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65012542 | ATGTATACTGCAATC[A/G]GTGTAAGTGGTGTGC | 234329 |
rs46869189 | snp | G/T | 0.152778 | 0.230321 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65017570 | CCAAACAGCTGAGGT[G/T]TTGGGTTAACAAAAT | 234329 |
rs46899179 | snp | C/T | | | downstream-variant-500B, intron-variant | Trim61, Trim60 | Mm_Celera | 8:65012597 | GTCCAGTCAATAAAA[C/T]GGACCACCAACTCAG | 234329 |
rs46992114 | snp | C/T | | | utr-variant-5-prime | Trim61, Trim60 | GRCm38.p3 | 8:65018545 | GGCTGGTCCTGCCTG[C/T]TCAGTTGTGGGCAGC | 234329 |
rs47032941 | snp | C/T | 0.152778 | 0.230321 | utr-variant-5-prime, intron-variant | Trim61, Trim60 | Mm_Celera | 8:65014837 | CAAGGCTGTTGCCTT[C/T]CCAGCTCAGTGACCT | 234329 |
rs47055146 | snp | C/T | 0.46281 | 0.131194 | intron-variant | Trim60 | Mm_Celera | 8:65007055 | GTGGTCTGAAGGGAT[C/T]TGCATGAAGTGATCC | 234329 |
rs47066174 | snp | A/G | 0.142012 | 0.225474 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65016643 | TAGAGCTTGAGAGTC[A/G]GGAAGCCTATAGCAC | 234329 |
rs47100572 | snp | A/G | 0.497041 | 0.0383476 | utr-variant-5-prime, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014871 | GTCAATAGAAGTAAG[A/G]TGCCTCACATCCAAG | 234329 |
rs47101787 | snp | A/G | 0.486111 | 0.0821678 | utr-variant-3-prime, intron-variant | Trim61, Trim60 | Mm_Celera | 8:65013205 | CTGCCCTGTCCACCG[A/G]CTGTTCTGTCTTGTT | 234329 |
rs47125780 | snp | A/G | 0.408163 | 0.193609 | missense | Trim60 | Mm_Celera | 8:65000776 | AATACTGCGCTGGGA[A/G]ACTGAGGCCATATTG | 234329 |
rs47198317 | snp | A/G | | | downstream-variant-500B, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65012529 | GAGAGTTTATTGTAT[A/G]TATACTGCAATCAGT | 234329 |
rs47220960 | snp | A/G | 0.132653 | 0.220748 | downstream-variant-500B | Trim60 | Mm_Celera | 8:64998393 | AGTTTCACCTATAAA[A/G]TAAATGTGGAGGGAA | 234329 |
rs47360867 | snp | C/T | 0.495868 | 0.0452663 | synonymous-codon, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65013333 | CCTGTACAGCAGGGA[C/T]TTATCCCTCAAATTG | 234329 |
rs47383259 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Trim60 | Mm_Celera | 8:65007569 | CCAGCTTCTTGAGTA[A/G]AATCTTAACTAGGAG | 234329 |
rs47423483 | snp | A/G | 0.21875 | 0.248039 | intron-variant | Trim60 | Mm_Celera | 8:65011077 | ATACTGATTGTGCTG[A/G]GAATGATATCCAGGG | 234329 |
rs47502414 | snp | A/T | | | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65018037 | TTATCATGGAATCTT[A/T]GGTCAGCCAGGTCTA | 234329 |
rs47555217 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB | Trim61, Trim60 | GRCm38.p3 | 8:65019005 | GTTGAGTATCTAGCC[A/G]ACACAGCTTCCTAAA | 234329 |
rs47596836 | snp | C/T | 0.165289 | 0.235211 | intron-variant | Trim60 | Mm_Celera | 8:65009780 | CCAGCCCCAGCTATA[C/T]CTATTTTTAAAAGCA | 234329 |
rs47612758 | snp | C/G | 0.495868 | 0.0452663 | intron-variant | Trim60 | GRCm38.p3 | 8:65011526 | CACCAGTTCCTTGCA[C/G]ATGTGTGTCTTGGTC | 234329 |
rs47687025 | snp | A/G | 0.391111 | 0.206368 | utr-variant-5-prime | Trim60 | Mm_Celera | 8:65001799 | TGTCTCACAGGTTAG[A/G]TCACGAGCTTGGTTT | 234329 |
rs47698608 | snp | C/T | 0.142012 | 0.225474 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65016122 | GTGACCTGCAACCTC[C/T]ACATTTACATCAGTA | 234329 |
rs47704531 | snp | C/T | | | utr-variant-5-prime | Trim61, Trim60 | GRCm38.p3 | 8:65018634 | CTCTGCTTGCTTTGT[C/T]CCTGAAGAGCATCAG | 234329 |
rs47720759 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim60 | GRCm38.p3 | 8:65011494 | AACAGAACCGGGCTC[A/G]GGCATGCCCAGTGGA | 234329 |
rs47810512 | snp | A/C | | | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65018117 | ACCAAAACGAACAAC[A/C]AAAGGTGAAAGGTAA | 234329 |
rs47811755 | snp | A/G | | | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65018015 | GGGTGCGGGGCACAG[A/G]GCAGGTTTATCATGG | 234329 |
rs47821130 | snp | C/G | 0.391111 | 0.206368 | missense | Trim60 | Mm_Celera | 8:65001070 | CTATTTTTTGATATT[C/G]AGCCTCCTCCCTCAG | 234329 |
rs47856150 | snp | C/T | 0.473373 | 0.11227 | intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65017471 | GGGACTCCAACTCCT[C/T]CTGGCCTCTGCAGGC | 234329 |
rs47872335 | snp | A/G | 0.497041 | 0.0383476 | utr-variant-5-prime, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014894 | CATCCAAGGAACTAA[A/G]TCCTTCCTGTGGGTG | 234329 |
rs47918450 | snp | A/G/T | 0.375 | 0.216506 | intron-variant | Trim60 | GRCm38.p3 | 8:65011610 | GTTCTCCATTGTGCC[A/G/T]AAGACTGGGGTGCAG | 234329 |
rs48047781 | snp | C/T | 0.486111 | 0.0821678 | missense, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65014324 | GGCTTTTCCCATGGA[C/T]GCTCTCCTTCTTGCC | 234329 |
rs48121095 | snp | C/T | 0.336735 | 0.234472 | synonymous-codon | Trim60 | Mm_Celera | 8:65000471 | AATTGCCCAGAAACC[C/T]GAGGACTGATTGCTC | 234329 |
rs48407348 | snp | A/T | 0.152778 | 0.230321 | intron-variant | Trim61, Trim60 | Mm_Celera | 8:65017529 | TACATGTGGGCAAAA[A/T]CCTCACACACATAAA | 234329 |
rs48410944 | snp | A/G | 0.244898 | 0.249948 | upstream-variant-2KB | Trim61, Trim60 | Mm_Celera | 8:65018958 | TCTAAACTAGCTAAA[A/G]TTAAGGGCAGGATTC | 234329 |
rs48474571 | snp | C/T | 0.459184 | 0.136902 | synonymous-codon, intron-variant | Trim61, Trim60 | GRCm38.p3 | 8:65013492 | CCATAATCCATCCTG[C/T]ACTGAGAACTGTTCA | 234329 |
rs48478712 | snp | A/T | 0.375 | 0.216506 | intron-variant | Trim60 | GRCm38.p3 | 8:65011602 | ATTCCATAGTTCTCC[A/T]TTGTGCCAAAGACTG | 234329 |
rs48621989 | snp | G/T | 0.42 | 0.183303 | utr-variant-3-prime | Trim60 | Mm_Celera | 8:64999959 | GTCACATATTGGCTT[G/T]GGCTGCCTTACTCTT | 234329 |