DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004544 mmu-miR-193* 67673 Tceb2 aguaGAACGGGCGUUUCUGGGu || ||| :|:|||||| aggcCUACCCCCUAGAGACCCa 2 19 7 28 [mm9:17:23961806-23961827:-] 0.5559 146 6 -22.66 -0.1865 MIMAT0004547 mmu-miR-203* 67673 Tceb2 acaacUUGACAGUUCUU-GGUGa |: ||| | ||| |||| cuuccAGAUGUGAUGAAGCCACa 2 18 103 125 [mm9:17:23961874-23961896:-] 0.7783 121 0 -9.70 -0.8135 MIMAT0000556 mmu-miR-324-3p 67673 Tceb2 ucGUCGU-GGACC-CCGUCACc ||| | :|||| ||||||| caCAGGAUUCUGGAGGCAGUGc 2 19 122 143 [mm9:17:23961856-23961877:-] 0.7783 160 7 -26.74 -0.8025 MIMAT0004786 mmu-miR-540-5p 67673 Tceb2 uguCUCAGUCUCCCACUG-GGAAc |:| | | | |||| |||| gcuGGGACUAAAGAUGACACCUUc 2 21 40 63 [mm9:17:23961936-23961946,23963553-23963565:-] 0.6471 120 0 -12.37 -0.5204 MIMAT0004789 mmu-miR-450a-3p 67673 Tceb2 uacuuacguuucguAGGGGUUa ||||||| ccuagagacccauuUCCCCAAu 2 9 17 38 [mm9:17:23961796-23961817:-] 0.4527 140 7 -15.14 -0.9359 MIMAT0004789 mmu-miR-450a-3p 67673 Tceb2 uacuuacguuucguaGGGGUUa |||||| ucacagaacucuuaaCCCCAAg 2 8 87 108 [mm9:17:23961726-23961747:-] 0.4268 120 6 -11.06 -0.1043 MIMAT0004789 mmu-miR-450a-3p 67673 Tceb2 uacuuacguuucguAGGGGUUa ||||||| ccuagagacccauuUCCCCAAu 2 9 182 203 [mm9:17:23961796-23961817:-] 0.4527 140 7 -15.14 -0.8584 MIMAT0003892 mmu-miR-762 67673 Tceb2 cgAGACAGGGCCGGGGUCGGGg || ||| ::||||||| caUCGAGCCCUUUUCCAGCCCu 2 21 75 96 [mm9:17:23961903-23961924:-] 0.7942 152 7 -26.46 -1.0908 MIMAT0015219 mmu-miR-3475 67673 Tceb2 aaGUUUGGUACA----C-GGAGGUCu |:|:|| | | | ||||||| auCGAGCCCUUUUCCAGCCCUCCAGa 2 20 76 101 [mm9:17:23961898-23961923:-] 0.7942 141 7 -22.07 -1.0254 MIMAT0004838 mmu-miR-742* 67673 Tceb2 acUAAUCGUUGGUACAC-UCAu || | ||| | |||| ||| caAUGAACAAGC-UGUGCAGUg 2 20 144 164 [mm9:17:23961835-23961855:-] 0.7624 121 0 -12.29 -0.4834 MIMAT0005291 mmu-miR-582-5p 67673 Tceb2 ucauugaccaACUUGUU-GACAu ||||||| |||| gcagugccaaUGAACAAGCUGUg 2 13 137 159 [mm9:17:23961840-23961862:-] 0.7624 124 0 -15.59 -0.6193 MIMAT0005856 mmu-miR-1195 67673 Tceb2 acUCGUCCGACCGGAGCUUGAGu | ||||||||:||||||||| --ACCAGGCUGGUCUCGAACUCa 2 22 1 21 [mm9:17:23963584-23963604:-] 0.5000 193 7 -41.17 -0.6278 MIMAT0007871 mmu-miR-1892 67673 Tceb2 uaggaggGAGGGCAGGGGUUua | | : ||||||| cuagagaCCCAUUUCCCCAAua 3 16 18 39 [mm9:17:23961795-23961816:-] 0.4527 127 0 -16.65 -0.1169 MIMAT0007871 mmu-miR-1892 67673 Tceb2 uaggaggGAGGGCAGGGGUUua | | : ||||||| cuagagaCCCAUUUCCCCAAua 3 16 183 204 [mm9:17:23961795-23961816:-] 0.4527 127 0 -16.65 -0.1021 MIMAT0009424 mmu-miR-1953 67673 Tceb2 gucuucggacucuugAAAGGGu |||||| cccccuagagacccaUUUCCCc 2 8 14 35 [mm9:17:23961799-23961820:-] 0.4527 120 6 -16.40 -0.2615 MIMAT0009426 mmu-miR-1955 67673 Tceb2 uuuucGACGUCACGUAGGACCCUGa |||| | | | ||||||| uccgcCUGCCGAG--UGCUGGGACu 2 21 26 48 [mm9:17:23963557-23963579:-] 0.5000 153 7 -23.13 -0.3570 MIMAT0009435 mmu-miR-1962 67673 Tceb2 uacacaGGGUCACGGUC-GGAGa ||| | |||| |||| aucgagCCCUUUUCCAGCCCUCc 2 17 76 98 [mm9:17:23961901-23961923:-] 0.7942 120 0 -19.99 -0.9586 MIMAT0009456 mmu-miR-1839-5p 67673 Tceb2 guUCUGGACAAGAUAGAUGGAa | |::|| ||:||||||| aaAAAUUUG-GCUGUCUACCUg 2 21 42 62 [mm9:17:23961772-23961792:-] 0.4751 158 7 -19.13 -0.4487 MIMAT0009456 mmu-miR-1839-5p 67673 Tceb2 guUCUGGACAAGAUAGAUGGAa | |::|| ||:||||||| aaAAAUUUG-GCUGUCUACCUg 2 21 207 227 [mm9:17:23961772-23961792:-] 0.4751 158 7 -19.13 -0.4424 MIMAT0011214 mmu-miR-2138 67673 Tceb2 uaaggcgguucGGGCAAGGGAa :|:||||||| ugauugacuuuUCUGUUCCCUc 2 12 61 82 [mm9:17:23961752-23961773:-] 0.4353 147 7 -18.68 -0.6861 MIMAT0011214 mmu-miR-2138 67673 Tceb2 uaaggcgguucGGGCAAGGGAa :|:||||||| ugauugacuuuUCUGUUCCCUc 2 12 226 247 [mm9:17:23961752-23961773:-] 0.4353 147 7 -18.68 -0.6491 MIMAT0015645 mmu-miR-3473 67673 Tceb2 ccgacucgguaGAGAGGu |||||| caccuucgaagCUCUCCg 2 8 57 74 [mm9:17:23961925-23961942:-] 0.7942 120 6 -14.05 -0.1174 MIMAT0000145 mmu-miR-133a 67673 Tceb2 gucgaccaacuucccCUGGUUu |||||| caaguaaagacuacaGACCAAu 2 8 105 126 [mm9:17:23961708-23961729:-] 0.5903 120 6 -8.79 -0.1219 MIMAT0000145 mmu-miR-133a 67673 Tceb2 gucgaccaacuucccCUGGUUu |||||| caaguaaagacuacaGACCAAu 2 8 270 291 [mm9:17:23961708-23961729:-] 0.5903 120 6 -8.79 -0.1104 MIMAT0000214 mmu-miR-185 67673 Tceb2 aguccuugacggaaaGAGAGGu |||||| augacaccuucgaagCUCUCCg 2 8 53 74 [mm9:17:23961925-23961946:-] 0.7942 120 6 -16.95 -0.1162 MIMAT0000236 mmu-miR-203 67673 Tceb2 gaucaccaGGAUUU----GUAAAGug ||||:| |||||| gccuacccCCUAGAGACCCAUUUCcc 3 15 9 34 [mm9:17:23961800-23961825:-] 0.5559 125 0 -12.25 -0.2295 MIMAT0000528 mmu-miR-18a 67673 Tceb2 gauaGA-CGUGA--UCUAC-GUGGAAu || | ||| ||||| |||||| agugCUGGGACUAAAGAUGACACCUUc 2 20 37 63 [mm9:17:23961936-23961946,23963553-23963568:-] 0.6471 129 6 -19.28 -0.5309 MIMAT0000541 mmu-miR-96 67673 Tceb2 ucGUUUUUA---CACGAUCACGGUUu ||::| | | | |||||||| caCAGGAUUCUGGAGGCAGUGCCAAu 2 22 122 147 [mm9:17:23961852-23961877:-] 0.7783 148 7 -19.26 -0.6356 MIMAT0000652 mmu-miR-25 67673 Tceb2 agucuggCUCUGUUCAC-GUUAc |||:| |||| |||| gauucugGAGGC-AGUGCCAAUg 2 16 127 148 [mm9:17:23961851-23961872:-] 0.7624 121 0 -18.85 -0.6333 MIMAT0000708 mmu-miR-363 67673 Tceb2 augucuACCUAUGGCAC-GUUAa |||| :| ||| |||| ggauucUGGAGGCAGUGCCAAUg 2 17 126 148 [mm9:17:23961851-23961873:-] 0.7624 124 0 -12.29 -0.6259 MIMAT0000743 mmu-miR-379 67673 Tceb2 ggaugcAAGGUAUCAGAUGGu ||: : ||||||| aaaaaaUUUGGCUGUCUACCu 2 16 41 61 [mm9:17:23961773-23961793:-] 0.4751 143 7 -11.46 -0.7739 MIMAT0000743 mmu-miR-379 67673 Tceb2 ggaugcAAGGUAUCAGAUGGu ||: : ||||||| aaaaaaUUUGGCUGUCUACCu 2 16 206 226 [mm9:17:23961773-23961793:-] 0.4751 143 7 -11.46 -0.7487 MIMAT0000769 mmu-miR-133b 67673 Tceb2 aucgaccaacuucccCUGGUUu |||||| caaguaaagacuacaGACCAAu 2 8 105 126 [mm9:17:23961708-23961729:-] 0.5903 120 6 -8.79 -0.1219 MIMAT0000769 mmu-miR-133b 67673 Tceb2 aucgaccaacuucccCUGGUUu |||||| caaguaaagacuacaGACCAAu 2 8 270 291 [mm9:17:23961708-23961729:-] 0.5903 120 6 -8.79 -0.1104 MIMAT0004847 mmu-miR-882 67673 Tceb2 ugauuacgcgauugaGAGAGGa |||||| augacaccuucgaagCUCUCCg 2 8 53 74 [mm9:17:23961925-23961946:-] 0.7942 120 6 -12.50 -0.1174 MIMAT0004854 mmu-miR-876-5p 67673 Tceb2 aucACUA-AG--UGUCUCUUUAGGu ||:| || || |||||||| ggcUGGUCUCGAACUCAGAAAUCCg 2 20 5 29 [mm9:17:23963576-23963600:-] 0.5000 153 7 -16.63 -0.3611 MIMAT0004858 mmu-miR-18b 67673 Tceb2 gauuGUCGUGA--UCUAC-GUGGAAu ::| ||| ||||| |||||| gugcUGGGACUAAAGAUGACACCUUc 2 20 38 63 [mm9:17:23961936-23961946,23963553-23963567:-] 0.6471 130 6 -18.51 -0.5309 MIMAT0004899 mmu-miR-92b 67673 Tceb2 ccUCC--GGCCCUGC-UCAC-GUUAu ||| :| ||| | |||| |||| acAGGAUUCUGGAGGCAGUGCCAAUg 2 21 123 148 [mm9:17:23961851-23961876:-] 0.7783 122 0 -23.03 -0.6707

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G005009 Tceb2 Mus musculus 67673 19536157 0 0 R47899; MOUSE$TCEB2_01; Binding factors: mmu-let-7a-5p , mmu-let-7b-5p , mmu-let-7c-5p , mmu-let-7d-5p , mmu-let-7e-5p , mmu-let-7f-5p , mmu-let-7g-5p , mmu-let-7i-5p , mmu-miR-196a-5p , mmu-miR-196b-5p , mmu-miR-98-5p

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Tceb2 mmu-miR-379 beg:44 end:61 pic:3' GGATGCAAGGTATCAGATGGT 5'& ||. . ||||||| &5' ------TTTGGCTGTCTACC- 3' Tceb2 mmu-miR-1839-5p beg:43 end:62 pic:3' GTTCTGGACAAGATAGATGGAA 5'& |..|| ||.||||||| &5' ----ATTTGG-CTGTCTACCT- 3' Tceb2 mmu-miR-184 beg:56 end:79 pic:3' TGGGAATAGTCAAGAGGCAGGT 5'& |||. | | ||.||.||.| &5' ACCTGATTGACTTTTCTGTTC- 3' Tceb2 mmu-miR-193star beg:8 end:29 pic:3' AGTAGAACGGGCGTTTCTGGGT 5'& || ||| .|.||||||| &5' ----CTACCCCCTAGAGACCCA 3' Tceb2 mmu-miR-1953 beg:56 end:75 pic:3' GTCTTCGGACTC-TTGAAAGGGT 5'& ||||| .|||||.|. &5' ------CCTGATTGACTTTTCT- 3' Tceb2 mmu-miR-2141 beg:63 end:85 pic:3' TTGAAAAGACTGTGGAGGA 5'& .||||||||| ||||.| &5' GACTTTTCTGTTCCCTCTT 3' Tceb2 mmu-miR-292-3p beg:34 end:58 pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& |.| ||||..|||| |. || &5' ATAAAAAAAATTTGGCTGT-CT-- 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Tceb2; Elob mmu-miR-199a* 103 120 UUGGUUACACGUCUGAUGACAU |||| || ||||||| -CCCAA-GUAAAGACUACA--- Tceb2; Elob mmu-miR-341 47 69 UGACUGGCUGGCUGGCUAGCU- :||:|:| |: |:|||:|| UUUGGCUGUCUACCUGAUUGAC Tceb2; Elob mmu-miR-379 9 62 -GGAUGC--------------AAGG---UAU--------------CAGAUGGU ||||| |||| ||| ||||||| GCCUACCCCCUAGAGACCCAUUUCCCCAAUAAAAAAAAUUUGGCUGUCUACCU Tceb2; Elob mmu-miR-672 87 108 GUGUGUGUCAUGU-GGUUGGAGU- ||||| || ::|||| || ---UCACAGAACUCUUAACCCCAA Tceb2; Elob mmu-miR-700 65 82 CCACCUGAGC---CAAGGGCGCAC ||||: |||||| ---UGACUUUUCUGUUCCCU---- Tceb2; Elob mmu-miR-710 92 118 GAGUUGAGA---GGGGU-----UCUGAACC |||||| ||||| ||||| --GAACUCUUAACCCCAAGUAAAGACUA-- Tceb2; Elob mmu-miR-764-3p 2 17 UGUCAACGGUGAUACCGGA-GGA ||| ||||| || -----GGCCUA---GGCCUACCC Tceb2; Elob mmu-miR-770-3p 1 16 GGUCGAGGUGCAGUCCGGGUGC :|| |: |||||:|| -GGGC-CU-----AGGCCUACC Tceb2; Elob mmu-miR-379 54 61 ------GGAUGCAAGGUAU-----------------CAGAUGGU || |: |||| ||||||| UAGAGACCCAU-UUCCCCAAUAAAAAAAAUUUGGCUGUCUACCU Tceb2; Elob mmu-miR-199a* 102 122 uuGGUUACACGUCUGAUGACau |||| || ||||||| | ccCCAA-GTAAAGACTACAGac Tceb2; Elob mmu-miR-672 84 106 guguGUGUCAUGUG-GUUGGAGU ||||| || | :|||| || tgttCACAGAACTCTTAACCCCA Tceb2; Elob mmu-miR-700 62 85 CCACCUG---AGCCAAGGGCGCAC | | ||| || |||||| | || GATTGACTTTTCTGTTCCCTCTTG Tceb2; Elob mmu-miR-710 90 119 gagUUGAGA---GGGG-----UUCUGAacc |||||| |||| |||||| cagAACTCTTAACCCCAAGTAAAGACTaca Tceb2; Elob mmu-miR-764-3p 1 16 ugucaaCGGUGAUACCGGA-GGa || ||| ||||| || ----ggGC--CTA-GGCCTACCc

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Tceb2 RAID00122837 mmu-mir-325 miRNA MI0000597 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID00207329 mmu-miR-7231-5p miRNA MIMAT0028430 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID00378406 mmu-miR-92b-3p miRNA MIMAT0004899 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID00419842 mmu-miR-18b-5p miRNA MIMAT0004858 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID00425780 mmu-miR-363-3p miRNA MIMAT0000708 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID01264812 mmu-miR-25-3p miRNA MIMAT0000652 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID01434085 mmu-miR-379-5p miRNA MIMAT0000743 Tceb2 mRNA 67673 CLIP-seq//Prediction 0.6308 Tceb2 RAID01573181 mmu-miR-18a-5p miRNA MIMAT0000528 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID01951623 mmu-miR-96-5p miRNA MIMAT0000541 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID02132699 mmu-miR-185-5p miRNA MIMAT0000214 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID02647259 mmu-miR-203-3p miRNA MIMAT0000236 Tceb2 mRNA 67673 CLIP-seq//Prediction 0.6308 Tceb2 RAID02843276 mmu-miR-133a-3p miRNA MIMAT0000145 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID03367452 mmu-miR-133b-3p miRNA MIMAT0000769 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID03406192 mmu-miR-450a-2-3p miRNA MIMAT0004789 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID03722978 mmu-miR-882 miRNA MIMAT0004847 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID03857853 mmu-miR-876-5p miRNA MIMAT0004854 Tceb2 mRNA 67673 Prediction 0.1828 Tceb2 RAID04065430 mmu-miR-341-3p miRNA MIMAT0000588 Tceb2 mRNA 67673 CLIP-seq 0.5483