SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs4225162 | snp | A/G | 0.21875 | 0.248039 | utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33895453 | AAATAGAAATGGGAG[A/G]GCACCTTGACGCTGG | 107823 |
rs4225163 | snp | A/C | 0.21875 | 0.248039 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33895383 | GCTTGTTTATCCTGG[A/C]CCACCAAGCCTGCCT | 107823 |
rs4225164 | snp | A/G | 0.21875 | 0.248039 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33895337 | CAGTGCAGACGCAGC[A/G]CAGCTGCTGAGGATG | 107823 |
rs4225165 | snp | C/T | 0.375 | 0.216506 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33895272 | CAGGCCTATACACAG[C/T]GCTAGGAGCTGGGTC | 107823 |
rs4225166 | snp | A/G | 0.21875 | 0.248039 | synonymous-codon | Whsc1 | GRCm38.p3 | 5:33895150 | TGTGACCCTTCGCCA[A/G]CACCGCCTTTTCTTC | 107823 |
rs4225167 | snp | C/T | 0.362812 | 0.2231 | synonymous-codon | Whsc1 | GRCm38.p3 | 5:33895123 | CTTCCTCTTTCCTTT[C/T]GACTTCAGTGATTCT | 107823 |
rs4225168 | snp | A/G | 0.4608 | 0.1344 | missense | Whsc1 | GRCm38.p3 | 5:33895113 | CCTTTTGACTTCAGT[A/G]ATTCTGGAAAGGGTT | 107823 |
rs6341465 | snp | A/G | 0.5 | 0 | intron-variant | Whsc1 | Mm_Celera | 5:33864938 | GGCCACTGAAGAAAG[A/G]ACATGTTCATTGGAG | 107823 |
rs6342476 | snp | C/T | 0.5 | 0 | intron-variant | Whsc1 | Mm_Celera | 5:33865113 | gtggttgtgagccac[C/T]atgtggttgctggga | 107823 |
rs6343025 | snp | A/G | 0.5 | 0 | intron-variant | Whsc1 | Mm_Celera | 5:33865210 | TTGAGTAGTATTTTA[A/G]GTAATGATTTTTTTT | 107823 |
rs6343121 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Whsc1 | Mm_Celera | 5:33865279 | TCAAGTAGCGTGAGC[C/T]TGACCTTCAGTTTGA | 107823 |
rs13478176 | snp | A/G | 0.0798611 | 0.183174 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33895413 | TCAAGTGTAGAGGTG[A/G]CGCTGTGTAGTAAGG | 107823 |
rs29499601 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Whsc1 | Mm_Celera | 5:33856207 | TGCCTGTGTCTCATT[A/T]CCTTTGTAAGGAACC | 107823 |
rs29509643 | snp | A/C | 0.444444 | 0.157135 | missense | Whsc1 | Mm_Celera | 5:33882145 | CCATGTCAATGTGAG[A/C]TGGTGCTTTGTGTGC | 107823 |
rs29530942 | snp | A/G | 0.32 | 0.24 | intron-variant | Whsc1 | Mm_Celera | 5:33833517 | GGAAGCAATCTCAGT[A/G]GTGACTCTGAAGTTT | 107823 |
rs29548214 | snp | G/T | 0.375 | 0.216506 | intron-variant, utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33875798 | CCACTCTCTGACTAA[G/T]TGGCCACTGCTCTCA | 107823 |
rs29567650 | snp | C/T | 0.484429 | 0.0868505 | intron-variant | Whsc1 | Mm_Celera | 5:33827751 | CATTACAGTTTTGTA[C/T]TTACGACTCTCATTT | 107823 |
rs29583299 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Whsc1 | GRCm38.p3 | 5:33831047 | TGCTGGCCTCCATGG[A/G]CATTGCATGAATGTG | 107823 |
rs29626965 | snp | A/G | 0.459184 | 0.136902 | intron-variant, downstream-variant-500B | Whsc1 | Mm_Celera | 5:33877386 | AGTGGGTTGGTGGAC[A/G]GAACATGGGCTCTCT | 107823 |
rs29627816 | snp | A/G | 0.32 | 0.24 | intron-variant, utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33871985 | TGAAAGGCAGGAAGA[A/G]TTTTGATTCTGTCCT | 107823 |
rs29628307 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Whsc1 | GRCm38.p3 | 5:33836628 | AGCCAAAGGAGCCTC[C/T]GAGACTTATCTGGAG | 107823 |
rs29632368 | snp | A/G | 0.188366 | 0.242283 | intron-variant | Whsc1, LOC105244765 | Mm_Celera | 5:33822540 | TTTTTGTGCAACCAC[A/G]CTATACAGGGCTGTT | 107823 |
rs29635623 | snp | C/T | 0.32 | 0.24 | intron-variant | Whsc1 | GRCm38.p3 | 5:33838726 | TGGTTTCTCACACCA[C/T]CATTTGGGTCCCTAT | 107823 |
rs29680834 | snp | C/T | 0.465374 | 0.126941 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33895579 | CTGATGGTGCAGGCT[C/T]CTATTCACATACTGC | 107823 |
rs29731148 | snp | A/T | 0.32 | 0.24 | intron-variant, utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33872789 | GGTAAATAAAAAAAA[A/T]TTTAAATATAGATCA | 107823 |
rs29731305 | snp | A/G | 0.375 | 0.216506 | upstream-variant-2KB, utr-variant-3-prime | Whsc1, LOC105244765 | GRCm38.p3 | 5:33819530 | CCGAGGAATAGGGGT[A/G]GAGGTCTGTGGGCTG | 107823 |
rs29776940 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Whsc1 | GRCm38.p3 | 5:33863171 | TTTCTAAATAGTGAG[A/G]CCTGGTGGTAAACAC | 107823 |
rs29777320 | snp | G/T | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33893749 | GGTAAATGTCTCCAG[G/T]CCAGGGGACCTGCTG | 107823 |
rs29780292 | snp | C/G | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33852953 | TATGTGCATTGTATG[C/G]GTATTGTGTGTGTAT | 107823 |
rs33118842 | snp | A/G | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33837109 | ACATGTGATGCTTGT[A/G]CATAGTACACAAGAG | 107823 |
rs33143888 | snp | A/G | 0.475309 | 0.108333 | intron-variant | Whsc1 | GRCm38.p3 | 5:33887158 | GAGATCACTTAACGC[A/G]TTACCCTAGACTGAT | 107823 |
rs33202951 | snp | C/T | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33866866 | CCGTACCTTTTGAAC[C/T]AGATTTTCCTTTCAT | 107823 |
rs33250155 | snp | A/C | 0.197531 | 0.244432 | intron-variant, downstream-variant-500B | Whsc1 | Mm_Celera | 5:33877643 | ACTCAGAGCATTTCG[A/C]GTTGCCTCTTTCTGG | 107823 |
rs33301297 | snp | A/G | 0.5 | 0 | upstream-variant-2KB, utr-variant-3-prime | Whsc1, LOC105244765 | GRCm38.p3 | 5:33818810 | AGTGACCTATAGACT[A/G]AAAATCTTGACTTGG | 107823 |
rs33314363 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Whsc1 | GRCm38.p3 | 5:33884188 | GAAAAGCTTAGAGTG[C/T]GCCCATGAGTCATGC | 107823 |
rs33386042 | snp | A/C | 0.5 | 0 | intron-variant | Whsc1 | GRCm38.p3 | 5:33893676 | GCTGTTCTTACTAGG[A/C]CTTTCTTTACTGACT | 107823 |
rs33397572 | snp | A/G | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33837654 | CCATTAACTTAGAGT[A/G]GTCCCTTAGGAGAGG | 107823 |
rs33398193 | snp | A/G | 0.375 | 0.216506 | intron-variant | Whsc1 | Mm_Celera | 5:33827823 | AAATAGTCTTGCTGT[A/G]TAACCCTGGGTGGTT | 107823 |
rs33430301 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Whsc1 | Mm_Celera | 5:33885743 | GCATGTGCTGTGGCG[C/T]GTGTGTGTGTGTGTG | 107823 |
rs33458511 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Whsc1 | GRCm38.p3 | 5:33838215 | AGAATTTCCTTTAAC[C/T]CTGCACTTGGCAGGA | 107823 |
rs33458702 | snp | A/G | 0.375 | 0.216506 | intron-variant | Whsc1 | GRCm38.p3 | 5:33836250 | GCAGCAAGGTGGCTT[A/G]CAAGCTTCTGGAGAT | 107823 |
rs33487419 | snp | A/T | 0.465374 | 0.126941 | intron-variant | Whsc1 | GRCm38.p3 | 5:33880915 | CTGCTCCAAAGTAGC[A/T]GCCTTGTGCTAGTTG | 107823 |
rs33562718 | snp | A/C/T | 0.203704 | 0.261891 | utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33896337 | ATGGCTTTGGAAAAA[A/C/T]CACAAAGTTAAACTA | 107823 |
rs33566797 | snp | A/T | 0.444444 | 0.157135 | upstream-variant-2KB, utr-variant-3-prime | Whsc1, LOC105244765 | GRCm38.p3 | 5:33819107 | ATCTGGCATTAAGTA[A/T]GCTACATGGTATCTC | 107823 |
rs33646831 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Whsc1 | GRCm38.p3 | 5:33842690 | AGTGTTAGACTCTTA[C/T]AACTTGAGTTGCAGG | 107823 |
rs33755429 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Whsc1 | Mm_Celera | 5:33856173 | TACTTTTATTTTTTA[C/T]TATAAAATATATCAC | 107823 |
rs45651877 | snp | A/C | 0.132653 | 0.220748 | intron-variant | Whsc1 | Mm_Celera | 5:33865259 | TCTTAAATGTTCTTG[A/C]TTGCTCAAGTAGCGT | 107823 |
rs45694950 | snp | A/G | 0.18 | 0.24 | intron-variant, utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33875054 | TTCCTAACATGCTTT[A/G]GAGCTTTTATTGCTT | 107823 |
rs45729556 | snp | A/G | 0.197531 | 0.244432 | intron-variant | Whsc1 | Mm_Celera | 5:33868321 | TATGCTGCACAACAT[A/G]ATCAAGTTTTTAAAA | 107823 |
rs45732888 | snp | G/T | 0.132653 | 0.220748 | intron-variant | Whsc1 | Mm_Celera | 5:33892121 | GCTTTCTAGTAAGCA[G/T]CACCTCTTCCCAGTA | 107823 |
rs45795609 | snp | A/C | 0.495868 | 0.0452663 | intron-variant, utr-variant-3-prime | Whsc1 | GRCm38.p3 | 5:33875548 | TCCTAGTTTTGGTAC[A/C]GGGGCATTGCCAGTC | 107823 |
rs45893836 | snp | C/G | 0.48 | 0.0979796 | intron-variant | Whsc1 | GRCm38.p3 | 5:33862714 | GCTCTGGGTATTTAT[C/G]GAAAAGAGTGACAGT | 107823 |
rs45977241 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33862256 | TCTCATTTAAACACT[A/G]GAGTTCCATATCAGC | 107823 |
rs45982795 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Whsc1 | Mm_Celera | 5:33863402 | GTGCAAATGAAAATA[A/G]AGAATTTGTATTCAA | 107823 |
rs46057882 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Whsc1 | Mm_Celera | 5:33854650 | TCATGTACAGTTCTT[C/T]GGTGATGCCCCAGAA | 107823 |
rs46084153 | snp | A/T | | | intron-variant | Whsc1 | Mm_Celera | 5:33857716 | AAATATTGGAGTAGT[A/T]TTTTAAAAAAAAAAA | 107823 |
rs46114084 | snp | A/C | 0.32 | 0.24 | intron-variant | Whsc1 | Mm_Celera | 5:33860508 | TCTCACTCCATGCTC[A/C]TAGGAACATTTTTGT | 107823 |
rs46121779 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33852615 | TGGGTATGGGACCTC[A/T]TAGAGTGATGCTACA | 107823 |
rs46145942 | snp | G/T | 0.124444 | 0.216185 | downstream-variant-500B | Whsc1, Nelfa | Mm_Celera | 5:33898140 | TTGGTCTCAGAGCAG[G/T]GAGTCAAGCTCGCCT | 107823 |
rs46308602 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Whsc1 | Mm_Celera | 5:33862867 | GAGTGAGTTAGTTCC[G/T]GGTGTCCTCAGCTTT | 107823 |
rs46324640 | snp | A/C | 0.231111 | 0.249285 | missense | Whsc1 | Mm_Celera | 5:33881169 | GCCTCCAACCCTTCA[A/C]ATCCACGGCCATCAA | 107823 |
rs46327767 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33879757 | CATCTGTGGAAGGTG[G/T]CGTTTATGATGAAAA | 107823 |
rs46423881 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Whsc1, LOC105244765 | Mm_Celera | 5:33823523 | ACTCTGTTAGTTTTG[A/G]GCACCCTGGTTTCTG | 107823 |
rs46435310 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33880316 | TTCACTGTACTGTAT[C/T]AACTTGAATGACAGT | 107823 |
rs46504755 | snp | C/G | 0.142012 | 0.225474 | intron-variant | Whsc1, LOC105244765 | Mm_Celera | 5:33823777 | CTGTTTTGGAAGGCT[C/G]TTGTAGGCATGATTT | 107823 |
rs46507850 | snp | A/G | | | intron-variant | Whsc1 | Mm_Celera | 5:33858172 | CCTCTGCCTGGTCTA[A/G]AACTCACAAAGATCT | 107823 |
rs46548215 | snp | C/T | | | intron-variant | Whsc1 | Mm_Celera | 5:33857690 | GGGTAGTTTAGAAGT[C/T]TTCCCAGAGAAAATA | 107823 |
rs46554282 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33886723 | TTTGCAATATATCCC[C/T]ATCATAGAGACACAA | 107823 |
rs46604501 | snp | A/C/G | 0.165289 | 0.235211 | intron-variant, utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33874827 | TCTCACATGTATTCA[A/C/G]ACATACAGGATGCTA | 107823 |
rs46617532 | snp | A/C | 0.32 | 0.24 | intron-variant | Whsc1 | Mm_Celera | 5:33855961 | TGGGAACTGAGTTTC[A/C]CTGGGCCTCCCTTTG | 107823 |
rs46625224 | snp | A/C | | | intron-variant | Whsc1 | Mm_Celera | 5:33857672 | GTTATTTTTGTCCCT[A/C]CAGGGTAGTTTAGAA | 107823 |
rs46641607 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33879223 | CTGATGTATTGGTGA[A/G]GGTGTCTCATGAAGT | 107823 |
rs46667252 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33893072 | GTTCCTAACAGGTCA[G/T]TACTCTGACGTCTTT | 107823 |
rs46718143 | snp | G/T | | | intron-variant, upstream-variant-2KB | Whsc1, LOC105244765 | GRCm38.p3 | 5:33825973 | GCTGTGTGGGCTGTT[G/T]GAATCAGACTCAGGT | 107823 |
rs46795769 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33890598 | TCTCCTGGAGTGAAT[C/T]CTGAGTTCTGGGCTG | 107823 |
rs46810425 | snp | C/T | | | intron-variant | Whsc1 | Mm_Celera | 5:33834213 | TAGATCTGGGGGGTC[C/T]GACTCTCTTGGCTCC | 107823 |
rs46838274 | snp | C/T | | | intron-variant | Whsc1 | Mm_Celera | 5:33857718 | ATATTGGAGTAGTTT[C/T]TTAAAAAAAAAAATT | 107823 |
rs46842374 | snp | C/T | | | intron-variant | Whsc1 | Mm_Celera | 5:33857790 | ACCAATATTTGGAGA[C/T]TGATCCAGGATGATT | 107823 |
rs46881499 | snp | A/C | | | intron-variant | Whsc1 | Mm_Celera | 5:33857739 | AAAAAAAATTTGTAA[A/C]CCATGTTAAGTGTGG | 107823 |
rs46924451 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33888881 | TTCTTAAACAGTCCC[C/T]AAGTTTAGCTCTTAA | 107823 |
rs46930998 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33878552 | TGGGTGGGATGTTAG[A/G]TTTTGAGAAGAGAGA | 107823 |
rs47000799 | snp | A/C | 0.32 | 0.24 | intron-variant, utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33872309 | CTATGCACGGGGTGT[A/C]TGAGCGGTGCCCAGG | 107823 |
rs47101762 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Whsc1 | Mm_Celera | 5:33863612 | GATAAAACTTTGCTA[C/T]TTAAAAATTTGTTAT | 107823 |
rs47127493 | snp | G/T | 0.244898 | 0.249948 | synonymous-codon | Whsc1 | Mm_Celera | 5:33843392 | GAAAGATCTTACTTC[G/T]TGTGTTTTTAATGGA | 107823 |
rs47132345 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Whsc1 | GRCm38.p3 | 5:33859977 | TTCTTTTATGTTTCT[A/G]GGACCCAGATTCATT | 107823 |
rs47155046 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Whsc1 | Mm_Celera | 5:33895639 | GCCCTGGGCTCCTTC[C/T]GATCAGGATTGGTAA | 107823 |
rs47196642 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33891131 | GTGCCTCTCCCTCTC[A/G]TGTCAGCACAGCATC | 107823 |
rs47200368 | snp | A/G | | | intron-variant | Whsc1 | Mm_Celera | 5:33834141 | GTACTTATGCCCTTG[A/G]TAAGAACCTGGTTTT | 107823 |
rs47295271 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33894620 | CAAATAAAAAAGTGA[C/T]TTTAAGTTAGGTATG | 107823 |
rs47304912 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Whsc1 | Mm_Celera | 5:33864810 | CTTTGGCCTGTGAGC[A/G]TGTATTCTATATAAT | 107823 |
rs47356957 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33890687 | TTCTCTTTCTATTCT[C/T]GTATCAACTGATGGG | 107823 |
rs47367577 | snp | C/G | | | intron-variant | Whsc1 | Mm_Celera | 5:33857776 | ATAGCTGTACTATCA[C/G]CAATATTTGGAGATT | 107823 |
rs47420830 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33886765 | GTTTACCTTGTCACA[A/G]ACTGGCCCTGAAGTG | 107823 |
rs47505634 | snp | A/C | 0.32 | 0.24 | missense | Whsc1 | Mm_Celera | 5:33855583 | TGATCCTGGCACAGA[A/C]AAGAGTACACCTCCA | 107823 |
rs47527512 | snp | A/G | 0.345679 | 0.230967 | missense | Whsc1 | Mm_Celera | 5:33867634 | AAGGCTATAGAGGCA[A/G]CCTCCTCACTCAAGA | 107823 |
rs47555616 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33894529 | TGCCTGGCCTTTGAG[C/T]ACCAATTACAAGCTT | 107823 |
rs47566172 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33880740 | GATTCTAGTCTTCCT[C/T]CAGCCACAGCAAGTC | 107823 |
rs47566759 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33852310 | TAGTTTCATTTGCTG[C/T]TGTTTTACTTACTAC | 107823 |
rs47590178 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33853956 | TAAAGGTCTCTTTTC[C/G]TCTTGTTATTGAAAT | 107823 |
rs47590966 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Whsc1 | Mm_Celera | 5:33845915 | AGGGAAACATTCTCT[A/G]AAGATCAGGCCCTTA | 107823 |