DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Spop | mmu-miR-692 | beg:892 | end:915 | pic:3' CTCACTCCG-CGAGTTTCTCTA 5'& ||| ||| | |.||||| &5' GAGAGAGAAAGAA-AGAGAGA- 3' |
Spop | mmu-miR-692 | beg:906 | end:927 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||| ||| | |.||||| &5' GAGAGAGA-GAA-AGAGAGA- 3' |
Spop | mmu-miR-29astar | beg:437 | end:452 | pic:3' GACTTGTGGTTTTCTTTAGTCA 5'& |||| |||||||| &5' -------CCAA---AAATCAGT 3' |
Spop | mmu-miR-199a-5p | beg:250 | end:267 | pic:3' CTTGTCCATCAGACTTGTGACCC 5'& |||.|| |||||||| &5' --------AGTTTG-ACACTGGG 3' |
Spop | mmu-miR-199bstar | beg:250 | end:267 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||.| .|||||||| &5' --------AGTTT-GACACTGGG 3' |
Spop | mmu-miR-1959 | beg:282 | end:300 | pic:3' GAGGTGACTCGATGTAGGGG 5'& || | ||| ||||||| &5' --CC-CCAAGC-ACATCCC- 3' |
Spop | mmu-miR-291a-3p | beg:558 | end:571 | pic:3' CGTGTGTTTCACCTTCGTGAAA 5'& | ||||||| &5' -----------GTTAGCACTT- 3' |
Spop | mmu-miR-294 | beg:558 | end:571 | pic:3' TGTGTGTTTTCCCTTCGTGAAA 5'& | ||||||| &5' -----------GTTAGCACTT- 3' |
Spop | mmu-miR-302a | beg:558 | end:572 | pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& | |||||||| &5' ------------GTTAGCACTTA 3' |
Spop | mmu-miR-302b | beg:558 | end:572 | pic:3' GATGATTTTGTACCTTCGTGAAT 5'& | |||||||| &5' ------------GTTAGCACTTA 3' |
Spop | mmu-miR-144 | beg:723 | end:741 | pic:3' TCATGTAGTAGATATGACAT 5'& || || ||||||| &5' ----CAGAATTCATACTGT- 3' |
Spop | mmu-miR-103 | beg:0 | end:9 | pic:3' AGTATCGGGACATGTTACGACGA 5'& .||||||| &5' --------------GATGCTGC- 3' |
Spop | mmu-miR-107 | beg:0 | end:9 | pic:3' ACTATCGGGACATGTTACGACGA 5'& .||||||| &5' --------------GATGCTGC- 3' |
Spop | mmu-miR-15astar | beg:1024 | end:1043 | pic:3' ACTCCGTCGTGTCATACCGGAC 5'& |||| ||| |||||||| &5' -----CAGCCCAG-ATGGCCTG 3' |
Spop | mmu-miR-1927 | beg:392 | end:410 | pic:3' AGTCAGGGATTGTAGGTCTCCAG 5'& |.||||. .||||||| &5' TTAGTCT-------TCAGAGGT- 3' |
Spop | mmu-miR-1186 | beg:133 | end:151 | pic:3' GTACGGAAATTAAGGTCGTGAG 5'& |||||| ||||||| &5' -----CTTTAAAA-CAGCACT- 3' |
Spop | mmu-miR-202-5p | beg:1057 | end:1077 | pic:3' TTTCTTCATAT-ACGTATCCTT 5'& ||| |||||||||. &5' -----AGTTGCCTGCATAGGAG 3' |
Spop | mmu-miR-450b-5p | beg:666 | end:686 | pic:3' ATAAGTCCTTGTATGACGTTTT 5'& .|| .| |||||||| &5' ----TAGTGGCTT-CTGCAAAA 3' |
Spop | mmu-miR-2140 | beg:1435 | end:1452 | pic:3' TGGTGGTTCTAGACGTGGA 5'& .|. |||||||| &5' ---GCTTCT-TCTGCACC- 3' |
Spop | mmu-miR-1955 | beg:1384 | end:1402 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& ||. |.|| ||||||| &5' -------GCGA-GTAT-CTGGGAC- 3' |
Spop | mmu-miR-542-3p | beg:214 | end:231 | pic:3' AAAGTCAATAGTTAGACAGTGT 5'& |.|. |||||||| &5' -------TGTTGCTCTGTCAC- 3' |
Spop | mmu-miR-186star | beg:146 | end:164 | pic:3' GGGTTTTTTAAGTGGAATCCCG 5'& |.||| ||||||| &5' -CTAAATAA-----CTTAGGG- 3' |
Spop | mmu-miR-130bstar | beg:911 | end:934 | pic:3' TCATCACG--TTGTCCCTTTCTCA 5'& || | .| || ||.|||| &5' ---AGAGAAAGAGAGAGAGAGAG- 3' |
Spop | mmu-miR-467b | beg:558 | end:573 | pic:3' GTATATGTACGTCCGTGAATG 5'& |. |||||||| &5' ---------GTTAGCACTTAC 3' |
Spop | mmu-miR-449a | beg:1326 | end:1348 | pic:3' TGGTC-GATTGTTATGTGACGGT 5'& .|| || ||. .|||||| &5' --TAGTCTCACGCA--GCTGCCA 3' |
Spop | mcmv-miR-M87-1 | beg:1335 | end:1358 | pic:3' CGACGGCGACGGCTGC-CGACGGA 5'& || |||||| .| |.||.| &5' ---GCAGCTGCCAGCCTGTTGTC- 3' |
Spop | mcmv-miR-M87-1 | beg:1349 | end:1375 | pic:3' CGACGGCGACGG--CTGC-CGACGGA 5'& |.||.| || || || | |||||| &5' GTTGTC-CT-CCTTGAGGAGCTGCC- 3' |
Spop | mcmv-miR-M87-1 | beg:36 | end:60 | pic:3' CGACGGCGACGGCTGC--CGACGGA 5'& || || ||| || |||||| &5' ---GCAGCAGCCACCGTTGCTGCC- 3' |
Spop | mmu-miR-449a | beg:0 | end:11 | pic:3' TGGTCGATTGTTATGTGACGGT 5'& |..|||||| &5' -------------ATGCTGCCA 3' |
Spop | mmu-miR-1894-5p | beg:1109 | end:1120 | pic:3' TCTCCGTCCACCATCCCCTCTC 5'& |||||||| &5' -------------AGGGGAGA- 3' |
Spop | mcmv-miR-m22-1 | beg:618 | end:636 | pic:3' ACCGGAGCCATGCCTGCCCCTT 5'& || |.|| |||||.| &5' ------CGTGATGG-CGGGGGA 3' |
Spop | mghv-miR-M1-2 | beg:856 | end:879 | pic:3' TTTCTCCCCCTCTC-C-CCCAGAC 5'& ||||||||||||.| | ||| &5' AAAGAGGGGGAGGGAGAGGG---- 3' |
Spop | mghv-miR-M1-8 | beg:643 | end:663 | pic:3' CTGGTTTGGGGGTC----ACTCACGA 5'& .| | ||||||.| &5' ---------TCTGGAAAATGAGTGTT 3' |
Spop | mmu-let-7c-1star | beg:868 | end:892 | pic:3' CCTTTCGATCTTCCAACATGTC 5'& |||.|| |||.|| | | || &5' GGAGAGGGAGAGGGGAG-AGAG 3' |
Spop | mmu-miR-101a | beg:1157 | end:1179 | pic:3' AAGTCAATAGTGT-----CATGACAT 5'& ||.|| |||||||. &5' -------ATTACTATTTTGTACTGTG 3' |
Spop | mmu-miR-101b | beg:1158 | end:1179 | pic:3' AAGTCGATAGTGTCATGACAT 5'& |.| ||||. |||||||. &5' -TTA-CTATTTT-GTACTGTG 3' |
Spop | mmu-miR-106a | beg:1229 | end:1251 | pic:3' GATGGACGTGACAATCGTGAAAC 5'& |.|.||| |||| || ||| &5' -TGCTTGC-CTGTGAGATCTT-- 3' |
Spop | mmu-miR-1197 | beg:1545 | end:1565 | pic:3' TCTTCATCTGGT---ACACAGGAT 5'& .|| ||||||.| &5' ------GGAAATTGTTGTGTCTT- 3' |
Spop | mmu-miR-1198 | beg:949 | end:971 | pic:3' GGTTC-GGTCGGTCCTTGTGTAT 5'& ||| |||| ||.||||| &5' -CAAATCCAGAA---AATACATA 3' |
Spop | mmu-miR-125a-5p | beg:101 | end:114 | pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& || ||||||| &5' --------------GTGTCAGGGA 3' |
Spop | mmu-miR-125b-5p | beg:101 | end:114 | pic:3' AGTGTTCAATCCCAGAGTCCCT 5'& || ||||||| &5' ------------GTGTCAGGGA 3' |
Spop | mmu-miR-129-3p | beg:780 | end:801 | pic:3' TACG-AAAAACCCCATTCCCGAA 5'& ||| ||||||||| |||| &5' ATGGATTTTTGGGG---GGGC-- 3' |
Spop | mmu-miR-129-5p | beg:121 | end:144 | pic:3' CGTT-C-GGGTCTGGCGTTTTTC 5'& |.| | |||||||. .|||| &5' -CGATGACCCAGACTTTAAAA-- 3' |
Spop | mmu-miR-130bstar | beg:861 | end:885 | pic:3' TCATCACGTTGTCCCTTTCTCA 5'& .| | | .| |||||.||.| &5' GGGGGAGGGAGAGGGAGAGGG- 3' |
Spop | mmu-miR-130bstar | beg:870 | end:892 | pic:3' TCATCACGTTG-TCCCTTTCTCA 5'& || | .| .||||.|||| &5' ---AGAGGGAGAGGGGAGAGAG- 3' |
Spop | mmu-miR-133a | beg:1384 | end:1406 | pic:3' GTCGACCAACTTCCCCTGGTTT 5'& .|| || |||||||.. &5' -GGCGAGTATCT-GGGACCAGG 3' |
Spop | mmu-miR-133b | beg:1384 | end:1406 | pic:3' ATCGACCAACTTCCCCTGGTTT 5'& |.|| || |||||||.. &5' TGGCGAGTATCT-GGGACCAGG 3' |
Spop | mmu-miR-139-3p | beg:383 | end:405 | pic:3' GAGGTTGTCCCGGCG-CAGAGGT 5'& |.|.| ||||.|| &5' ----AGCGGACATTTAGTCTTCA 3' |
Spop | mmu-miR-139-5p | beg:501 | end:512 | pic:3' GACCTCTGTGCACGTGACATCT 5'& |||||.|| &5' --------------ACTGTGGA 3' |
Spop | mmu-miR-139-5p | beg:71 | end:93 | pic:3' GACCTCTGTGCACGT--GACATCT 5'& | ||||| | ||| ||||.|| &5' --GTAGACA-GCGCAATCTGTGGA 3' |
Spop | mmu-miR-140star | beg:1166 | end:1184 | pic:3' GGCACCAAGATGGGACACCAT 5'& || |||. ||||||| &5' ------TTGTACTGTGTGGTA 3' |
Spop | mmu-miR-144 | beg:1159 | end:1179 | pic:3' TCATGTAGTAGATATGACAT 5'& ||| |.|.||||||. &5' --TACTAT-TTTGTACTGTG 3' |
Spop | mmu-miR-145 | beg:690 | end:711 | pic:3' TCCCTAAGGACC-C---TTTTGACCTG 5'& .||| | ||||||||| &5' --------TTGGTGTTAAAAACTGGA- 3' |
Spop | mmu-miR-150 | beg:1 | end:20 | pic:3' GTGACCATGTTCCCAACCCTCT 5'& .||| || ||||||||| &5' -GCTGC--CA---GTTGGGAGA 3' |
Spop | mmu-miR-150 | beg:156 | end:175 | pic:3' GTGACCATGTTCCCA--ACCCTCT 5'& .|.||| ||||.|| &5' --------TAGGGGGACTGGGGGA 3' |
Spop | mmu-miR-151-3p | beg:259 | end:278 | pic:3' GGAGTTCCTCGGAGTCAGATC 5'& | .||| .|||||.||| &5' ---CTGGGA--TTCAGTTTAG 3' |
Spop | mmu-miR-181c | beg:641 | end:663 | pic:3' TGAGTGGCTGT-CCA---ACTTACAA 5'& |.||. || |||.|||| &5' -----CTGATCTGGAAAATGAGTGTT 3' |
Spop | mmu-miR-182 | beg:1401 | end:1421 | pic:3' GCCACACTCAAGATGGTAACGGTTT 5'& .|| ||||. |||||||. &5' -------GGTCCTACT-TTGCCAAG 3' |
Spop | mmu-miR-188-5p | beg:1263 | end:1284 | pic:3' GGGAGGTGGTACGTTCCCTAC 5'& .|||||.|.||| |||||| &5' -TCTCCATCGTGC-AGGGAT- 3' |
Spop | mmu-miR-1892 | beg:820 | end:841 | pic:3' TAGGAGGG-AGGGCAGGGGTTTA 5'& ||.|||| |||| |.||| &5' -TCTTCCCTTCCCCTTCCC---- 3' |
Spop | mmu-miR-1894-5p | beg:156 | end:178 | pic:3' TCTCCGTCCACC--ATCCCCTCTC 5'& .||| || |.||||||.| &5' -----TAGGGGGACTGGGGGAGGG 3' |
Spop | mmu-miR-1894-5p | beg:860 | end:890 | pic:3' TCTCCGTCCA---CCA--TCCCCTCTC 5'& ||.|| ||| || ||||||||| &5' AGGGGGAGGGAGAGGGAGAGGGGAGAG 3' |
Spop | mmu-miR-1897-5p | beg:717 | end:730 | pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& |.||||||.| &5' -----------TTCATCCAGA- 3' |
Spop | mmu-miR-1897-5p | beg:1476 | end:1498 | pic:3' GGGGGAGAAAGAGGTAGGTTTC 5'& .|.| |||||||| |||| &5' -TCTC-CTTTCTCCTAACAAA- 3' |
Spop | mmu-miR-1903 | beg:866 | end:885 | pic:3' ACAGAGTCCTTCTTCTTCTTCC 5'& |||.|||.|.|||.|| &5' ------AGGGAGAGGGAGAGGG 3' |
Spop | mmu-miR-1907 | beg:211 | end:225 | pic:3' TGGAGGTCTAGGAGACGACGAG 5'& || |||.||||| &5' ----------CC-CTGTTGCTC 3' |
Spop | mmu-miR-1933-3p | beg:1066 | end:1086 | pic:3' TATCAGTGTGACTA--CCAGGACC 5'& ||.| || ||||||| &5' -----CATAG-GAGCCGGTCCTG- 3' |
Spop | mmu-miR-1934 | beg:1385 | end:1406 | pic:3' TCTCCTGCTTCGTC--CCCTGGTCT 5'& |.|| ||.| ||||||||. &5' ----GGCG-AGTATCTGGGACCAGG 3' |
Spop | mmu-miR-1937a | beg:251 | end:270 | pic:3' ACCCCCGAGCA--GGCCCTAA 5'& |.|.| |.|||||| &5' -----GTTTGACACTGGGATT 3' |
Spop | mmu-miR-1937c | beg:1383 | end:1401 | pic:3' ACCCCCGA--GAAGGCCCTA 5'& ||| . ||.|||| &5' ----GGCGAGTATCTGGGA- 3' |
Spop | mmu-miR-1940 | beg:1080 | end:1111 | pic:3' TTGACGAGGTGGAAGAGTC----AGGAGGTA 5'& ||| || .|| |.|| ||.|||| &5' --CTGTCCCTTCTGATTAGCCCCTCTTCCA- 3' |
Spop | mmu-miR-1942 | beg:624 | end:646 | pic:3' GTTGGTCTACTTCTGTAGACT 5'& ..| .|. |||| ||||||| &5' -GGCGGGG-GAAGTCATCTGA 3' |
Spop | mmu-miR-1952 | beg:157 | end:177 | pic:3' GTCTTCCT--CCCACCTCT 5'& .||..||| ||| ||||. &5' TAGGGGGACTGGG-GGAGG 3' |
Spop | mmu-miR-1952 | beg:870 | end:889 | pic:3' GTCTTCCTC-CCACCTCT 5'& |||.|||| || ||||| &5' -AGAGGGAGAGG-GGAGA 3' |
Spop | mmu-miR-1955 | beg:251 | end:270 | pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |. || ||||||.| &5' -------GTT-TGACA-CTGGGATT 3' |
Spop | mmu-miR-1957 | beg:48 | end:64 | pic:3' CAGTATACGA-GATGGTGAC 5'& |.| ||.|||||| &5' -------GTTGCTGCCACTG 3' |
Spop | mmu-miR-1960 | beg:265 | end:285 | pic:3' TCGGGAGAAGATTGTCGTGACC 5'& .|| .| .||||||| &5' ----TTCAGTTTA-GGCACTGG 3' |
Spop | mmu-miR-1967 | beg:1313 | end:1337 | pic:3' CGTAGAAGAGGGGTCCTAGGAGT 5'& .||.| |||.||| .|||| &5' -TATTTACTCTCCATAG-TCTCA 3' |
Spop | mmu-miR-1967 | beg:665 | end:693 | pic:3' CGTA---GAAGAGGGGTCCTAGGAGT 5'& |.| ||||| | ||.||.| &5' GTAGTGGCTTCTGCAAAA-ATTCTTA 3' |
Spop | mmu-miR-1968 | beg:1323 | end:1346 | pic:3' TCAGGTGGTAGGAATTGTCGACGT 5'& ||||. .||. .||||||| &5' --TCCATAGTCTCACGCAGCTGC- 3' |
Spop | mmu-miR-1969 | beg:5 | end:28 | pic:3' TGGGTACAA-TTTCAGAGGTAGAA 5'& ||| ||| ..|| ||||||.| &5' --CCA-GTTGGGAGACTCCATTT- 3' |
Spop | mmu-miR-1971 | beg:1334 | end:1352 | pic:3' AGAGTCG--GGTCGGAAATG 5'& | |||| ||||||| &5' -CGCAGCTGCCAGCCT---- 3' |
Spop | mmu-miR-199bstar | beg:268 | end:285 | pic:3' CTTGTCCATCAGATTTGTGACCC 5'& |||.||..|||||| &5' --------AGTTTAGGCACTGG- 3' |
Spop | mmu-miR-19b | beg:1035 | end:1054 | pic:3' AGTCAAAACGTACC--TAAACGTGT 5'& || ||| .||||||| &5' --------GCCTGGCTGTTTGCAC- 3' |
Spop | mmu-miR-200astar | beg:1230 | end:1248 | pic:3' AGGTCGTGACAGGCCATTCTAC 5'& || .|| || ||.|||| &5' ----GC-TTG-CCTGTGAGAT- 3' |
Spop | mmu-miR-200astar | beg:1285 | end:1315 | pic:3' AGGTCGTGACAG-------GCCATTCTAC 5'& |.||| |||| |||||.||| &5' TTCAGAA-TGTCTAAGAAGCGGTAGGAT- 3' |
Spop | mmu-miR-200b | beg:455 | end:472 | pic:3' AGTAGTAATGGTCCGTCATAAT 5'& ||| ||| |.|||||| &5' -----ATT-CCA-GTAGTATT- 3' |
Spop | mmu-miR-200c | beg:457 | end:472 | pic:3' AGGTAGTAATGGGCCGTCATAAT 5'& .|| |.|||||| &5' ----------TCCAGTAGTATT- 3' |
Spop | mmu-miR-204 | beg:1530 | end:1552 | pic:3' TCCGTATC-CTAC--TGTTTCCCTT 5'& ||.| ||| |.|||||||| &5' ----ATGGAGATTAAATAAAGGGAA 3' |
Spop | mmu-miR-204 | beg:158 | end:180 | pic:3' TCCGTATCCT-ACTGTTTCCCTT 5'& ||| .||| ||. ..|||||| &5' AGG---GGGACTGGGGGAGGGAA 3' |
Spop | mmu-miR-207 | beg:859 | end:884 | pic:3' CTCCCTCCTCTCGG-TCCTCTTCG 5'& ||||| ||||.| .|||||.| &5' GAGGG-GGAGGGAGAGGGAGAGG- 3' |
Spop | mmu-miR-207 | beg:865 | end:890 | pic:3' CTCCCTC-CTCTCGGTCCTCTTCG 5'& ||||||| |.||| .|||||. &5' GAGGGAGAGGGAGAGGGGAGAG-- 3' |
Spop | mmu-miR-207 | beg:157 | end:177 | pic:3' CTCCCTCCTCTCGGTCCTCTTCG 5'& |||.| | ||.||.| &5' -----AGGGGGACTGGGGGAGG- 3' |
Spop | mmu-miR-207 | beg:918 | end:947 | pic:3' CTCCCTC-CTCTCGG---TCCTCTTCG 5'& ||| ||| ||||| ||||||.| &5' GAGAGAGAGAGAGAAAAGAGGAGAGG- 3' |
Spop | mmu-miR-207 | beg:619 | end:639 | pic:3' CTCCCTCCTCT-CGGTCCTCTTCG 5'& | || | |.||.||||. &5' -------GTGATGGCGGGGGAAGT 3' |
Spop | mmu-miR-211 | beg:1530 | end:1552 | pic:3' TCCGTTTCCTAC----TGTTTCCCTT 5'& ||| |.|||||||| &5' -------GGAGATTAAATAAAGGGAA 3' |
Spop | mmu-miR-2134 | beg:177 | end:191 | pic:3' CGTGGGGCAAAGGGTTCTG 5'& | ||||.||| &5' -------GGG-CCCAGGAC 3' |
Spop | mmu-miR-2135 | beg:121 | end:140 | pic:3' CAAAGCCG--GGGTTCTGGAGA 5'& || ||| ||||.|. &5' ----CGATGACCC-AGACTTT- 3' |
Spop | mmu-miR-214 | beg:1338 | end:1357 | pic:3' TGACGGACAGACACGGACGACA 5'& .||||| |||||.||| &5' GCTGCCA------GCCTGTTGT 3' |
Spop | mmu-miR-2145 | beg:1396 | end:1417 | pic:3' TTGGTCCGGGCTGGGACGA 5'& .||||||.|| ||..||| &5' GACCAGGTCCTACTTTGC- 3' |
Spop | mmu-miR-216a | beg:1267 | end:1286 | pic:3' AGTGTCAACGGTCGACTCTAAT 5'& ||. ||| |.||||| &5' -CATCG-TGCA----GGGATTA 3' |
Spop | mmu-miR-216a | beg:250 | end:270 | pic:3' AGTGTCAACG-GTCGACTCTAAT 5'& |||| || |||.|||| &5' ----AGTTTGACA-CTGGGATT- 3' |
Spop | mmu-miR-218 | beg:277 | end:296 | pic:3' TGT-ACCAATCTAGTTCGTGTT 5'& .|| ||| |||||||| &5' GCACTGGCCC---CAAGCACA- 3' |
Spop | mmu-miR-220 | beg:653 | end:675 | pic:3' TTCACAGACTGTGA-CACCACC 5'& .|||||.||.|. | |||| &5' GAGTGTTTGGCGGTAGTGG--- 3' |
Spop | mmu-miR-27a | beg:492 | end:512 | pic:3' CGCCTTGAATCGG-TGACACTT 5'& | ||| || ||||||.| &5' ---GTCCTT--CCAACTGTGGA 3' |
Spop | mmu-miR-27b | beg:491 | end:512 | pic:3' CGTCTTGAATCGG-TGACACTT 5'& .|| ||| || ||||||.| &5' -TAGTCCTT--CCAACTGTGGA 3' |
Spop | mmu-miR-28 | beg:1423 | end:1445 | pic:3' GAGTTATCTGACACTCGAGGAA 5'& |||| | |||.|||.||| &5' --CAATTGTA-GTGGGCTTCTT 3' |
Spop | mmu-miR-290-3p | beg:791 | end:806 | pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& .|| ||||.||| &5' ------------GGGGGGCATTTT 3' |
Spop | mmu-miR-292-3p | beg:290 | end:313 | pic:3' TGTG-AGTTTTGGACCGCCGTGAAA 5'& .||| || |.| |.||.|||| &5' GCACATCCCAGCA--GTGGTACTT- 3' |
Spop | mmu-miR-292-3p | beg:792 | end:806 | pic:3' TGTGAGTTTTGGACCGCCGTGAAA 5'& || ||||.||| &5' -------------GGGGGCATTTT 3' |
Spop | mmu-miR-293 | beg:290 | end:312 | pic:3' TGTGATGTTTGAGACGCCGTGA 5'& |||. | |.| |.||.||| &5' ACATCCC-AGCA--GTGGTACT 3' |
Spop | mmu-miR-293star | beg:723 | end:746 | pic:3' GTTTTACAGTGTGTCA-AACTCA 5'& ||.||| |||.|| || |||| &5' CAGAAT-TCATACTGTCTTGA-- 3' |
Spop | mmu-miR-295 | beg:550 | end:571 | pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& .||| || |||||||| &5' --GCTCTCTCGT--TAGCACTT- 3' |
Spop | mmu-miR-302d | beg:550 | end:572 | pic:3' TGTGAGTTTGTACCTTCGTGAAT 5'& .||| |.| |||||||| &5' --GCTCTCTCGTT--AGCACTTA 3' |
Spop | mmu-miR-3072 | beg:782 | end:802 | pic:3' TCTTCCGAAGGACCTCCCCCGT 5'& || ||..||| ||||||| &5' ----GGATTTTTGG-GGGGGCA 3' |
Spop | mmu-miR-3099 | beg:1469 | end:1493 | pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& |||| ||.||| ||.| |||| &5' TCCCAAATCTC-CTTTCTCCTA 3' |
Spop | mmu-miR-30a | beg:1028 | end:1053 | pic:3' GAAGGTCAGCT---CCTACAAATGT 5'& |||| .|. || |||||.|| &5' ---CCAGATGGCCTGGCTGTTTGCA 3' |
Spop | mmu-miR-30b | beg:1031 | end:1053 | pic:3' TCGACTCACAT--CCTACAAATGT 5'& || || || |||||.|| &5' ----GA-TGGCCTGGCTGTTTGCA 3' |
Spop | mmu-miR-30bstar | beg:1457 | end:1477 | pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& || ||.| ||| |||||| &5' ---GTTAATACCCA-ATCCCA- 3' |
Spop | mmu-miR-30c-2star | beg:1473 | end:1493 | pic:3' TCTCATTTGTCGG-AAGAGGGTC 5'& |||. || ||||||.| &5' -----AAATCTCCTTTCTCCTA- 3' |
Spop | mmu-miR-30d | beg:1033 | end:1053 | pic:3' GAAGGTCAGCC---CCTACAAATGT 5'& .|| || |||||.|| &5' --------TGGCCTGGCTGTTTGCA 3' |
Spop | mmu-miR-30e | beg:1034 | end:1053 | pic:3' GAAGGTCAGTTCCTACAAATGT 5'& .| | || |||||.|| &5' -----GG-CCTGGCTGTTTGCA 3' |
Spop | mmu-miR-30estar | beg:636 | end:653 | pic:3' CGACATTTGTAGGCT-GACTTTC 5'& ||||.|| |||.|| &5' --------CATCTGATCTGGAA- 3' |
Spop | mmu-miR-322star | beg:461 | end:478 | pic:3' CACAACGTCGCGAAGTACAAA 5'& |.||. ||.||||| &5' -----GTAGTA-TTTATGTT- 3' |
Spop | mmu-miR-328 | beg:173 | end:199 | pic:3' TGCCTTCCCGTC-TCT---CCCGGTC 5'& |||||||| .|| |||||| &5' --GGAAGGGCCCAGGACTCGGGCCA- 3' |
Spop | mmu-miR-330star | beg:1440 | end:1462 | pic:3' AGAGACGTCCGGGACACGAAACG 5'& .|||||| |||||||. ||. &5' -TTCTGCA--CCCTGTGTG-TGT 3' |
Spop | mmu-miR-343 | beg:862 | end:882 | pic:3' AGACCCGTGTACTTCCCTCT 5'& ||| | . .||||||| &5' ---GGGGAGGGAGAGGGAGA 3' |
Spop | mmu-miR-3475 | beg:19 | end:38 | pic:3' AAGTTTGGTACAC-GGAGGTCT 5'& |||| ..|||||| &5' ------CCATTTATTTTCCAGA 3' |
Spop | mmu-miR-34a | beg:1354 | end:1376 | pic:3' TGTTGGTC-GATTCTGTGACGGT 5'& || .|.|| .|||||| &5' ----CCTCCTTGAGGAGCTGCCA 3' |
Spop | mmu-miR-34a | beg:39 | end:61 | pic:3' TGTTGGTCGATTCTGTGACGGT 5'& .||.||| | ..|||||| &5' GCAGCCACCGT---TGCTGCCA 3' |
Spop | mmu-miR-34b-5p | beg:723 | end:743 | pic:3' TGTTAGTCGATTAATGTGACGGA 5'& ||| |.||||.|| &5' -----CAGAATTC-ATACTGTCT 3' |
Spop | mmu-miR-351 | beg:97 | end:114 | pic:3' GTCCGAGTTTCCCGAGG---AGTCCCT 5'& |||. ||||||| &5' -------------CTCTGTGTCAGGGA 3' |
Spop | mmu-miR-365 | beg:783 | end:804 | pic:3' TATTCCTAAAAA--TCCCCGTAAT 5'& |||||||| .|||||||| &5' ----GGATTTTTGGGGGGGCATT- 3' |
Spop | mmu-miR-370 | beg:1397 | end:1423 | pic:3' TGGTCCAAGGTGGGGTCG-TCCG 5'& ||||||| |.||. . |||| &5' ACCAGGTCCTACTTTGCCAAGGC 3' |
Spop | mmu-miR-378star | beg:98 | end:113 | pic:3' TGTGTCCTGGACCTCAGTCCTC 5'& .||| ||||||. &5' --------TCTGT-GTCAGGG- 3' |
Spop | mmu-miR-380-3p | beg:1053 | end:1073 | pic:3' TTCTACACCTGGTAT---GATGTAT 5'& |||.| ||.|||| &5' --------GACTAGTTGCCTGCATA 3' |
Spop | mmu-miR-382 | beg:141 | end:160 | pic:3' GCTTAGGTGGTGC-TTGTTGAAG 5'& || ||| ||.||||| &5' ------CAGCACTAAATAACTT- 3' |
Spop | mmu-miR-383 | beg:1076 | end:1098 | pic:3' TCGGTGTCAGTGGAAGACTAGA 5'& .|.| | ||| |||||||||. &5' GGTC-CTGTC-CCTTCTGATT- 3' |
Spop | mmu-miR-384-5p | beg:562 | end:581 | pic:3' TGTAACG-GATCCTTAACAAATGT 5'& || || |||||.|| &5' -----GCACTTAC---TGTTTGCA 3' |
Spop | mmu-miR-384-5p | beg:1035 | end:1053 | pic:3' TGTAACGGATCCTTAACAAATGT 5'& ||||.| |||||.|| &5' -----GCCTGGC---TGTTTGCA 3' |
Spop | mmu-miR-421 | beg:457 | end:480 | pic:3' CGCGGGTTAATTACAG-ACAACTA 5'& .|||.| |||||| &5' ---TCCAGTAGTATTTATGTTGA- 3' |
Spop | mmu-miR-423-3p | beg:314 | end:338 | pic:3' TGACTC----CCCGGAGTCTGGCTCGA 5'& ||| |||. || |||.|||| &5' ---GAGAAATGGGTGTCTGACTGAGC- 3' |
Spop | mmu-miR-423-5p | beg:1086 | end:1106 | pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||. . |. ||||||| &5' -----CTTCTGATTAGCCCCTC- 3' |
Spop | mmu-miR-432 | beg:52 | end:73 | pic:3' GACGGGTGACTAGATGAGGTTCT 5'& ||| ||||||| ||| |||.| &5' CTG-CCACTGA-CTA--CCAGG- 3' |
Spop | mmu-miR-449a | beg:1366 | end:1376 | pic:3' TGGTCGATTGTTATGTGACGGT 5'& .|||||| &5' ---------------GCTGCCA 3' |
Spop | mmu-miR-449a | beg:40 | end:61 | pic:3' TGGTCGATTGTTATGTGACGGT 5'& |||| || .| ..|||||| &5' --CAGCC-ACCGT-TGCTGCCA 3' |
Spop | mmu-miR-449c | beg:722 | end:743 | pic:3' GGTCGATCGTTACGTGACGGA 5'& |||| || .||||.|| &5' CCAGAATTCA---TACTGTCT 3' |
Spop | mmu-miR-465a-3p | beg:1245 | end:1263 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||| ||| ||||||.|. &5' ----CTT-GAA--GCCCTGGTT 3' |
Spop | mmu-miR-465a-3p | beg:1177 | end:1193 | pic:3' AGATGAATCTTTCC---GGGACTAG 5'& || |.|||.|| &5' ------------GGTATCTCTGGTC 3' |
Spop | mmu-miR-465b-3p | beg:1245 | end:1263 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||| ||| ||||||.|. &5' ----CTT-GAA--GCCCTGGTT 3' |
Spop | mmu-miR-465b-3p | beg:1177 | end:1193 | pic:3' AGATGAATCTTTCC---GGGACTAG 5'& || |.|||.|| &5' ------------GGTATCTCTGGTC 3' |
Spop | mmu-miR-465c-3p | beg:1245 | end:1263 | pic:3' AGATGAATCTTTCCGGGACTAG 5'& ||| ||| ||||||.|. &5' ----CTT-GAA--GCCCTGGTT 3' |
Spop | mmu-miR-465c-3p | beg:1177 | end:1193 | pic:3' AGATGAATCTTTCC---GGGACTAG 5'& || |.|||.|| &5' ------------GGTATCTCTGGTC 3' |
Spop | mmu-miR-467e | beg:550 | end:572 | pic:3' TGTATATGTACGAG--------TGTGAATA 5'& |||| .|||||| &5' ----------GCTCTCTCGTTAGCACTTA- 3' |
Spop | mmu-miR-483star | beg:869 | end:892 | pic:3' TTCTGCC-CTCCCCTC-CTCACT 5'& .||| || |||||||| ||| &5' GAGAGGGAGAGGGGAGAGAG--- 3' |
Spop | mmu-miR-488 | beg:582 | end:601 | pic:3' CTGGTTCTTTGTCGGAAAGTT 5'& |||| || |||||.| &5' ---CAAGCC-CATCCTTTTA- 3' |
Spop | mmu-miR-488star | beg:1384 | end:1400 | pic:3' AACTCTCACGATAATAGACCC 5'& || |||||||| &5' --------GCGAGTATCTGGG 3' |
Spop | mmu-miR-491 | beg:1308 | end:1330 | pic:3' GGAGTACCTTCCCA----AGGGGTGA 5'& ||| ||.|||. &5' ------GGATTTATTTACTCTCCAT- 3' |
Spop | mmu-miR-503 | beg:36 | end:58 | pic:3' GACGTCATGACAAGGGCGACGAT 5'& |||| |||.||||. &5' --GCAGCAGCCA--CCGTTGCTG 3' |
Spop | mmu-miR-540-3p | beg:232 | end:248 | pic:3' GGTCCTAGCTGGAGACTGGA 5'& .| |||.||.||| &5' -------TGCCCTTTGGCCT 3' |
Spop | mmu-miR-544 | beg:368 | end:383 | pic:3' CTCGAACGATTTTTACGTCTTA 5'& ||||| |||||| &5' ---------AAAAAAGCAGAA- 3' |
Spop | mmu-miR-615-3p | beg:168 | end:196 | pic:3' TTCTCCCT--CTGGGTCC-GAGCCT 5'& ..|||||| |.|||||| |||||. &5' GGGAGGGAAGGGCCCAGGACTCGGG 3' |
Spop | mmu-miR-666-5p | beg:1220 | end:1243 | pic:3' CCGAGAGTGT-CGACACGGGCGA 5'& || ||| | | ||| ||||.|. &5' GGGTCTGAGATGCT-TGCCTGT- 3' |
Spop | mmu-miR-666-5p | beg:1039 | end:1070 | pic:3' CCGA-GAGTGTCGAC------ACGGGCGA 5'& |||| .| || ||| ||||.|| &5' GGCTGTTTGCACCTGACTAGTTGCCTGC- 3' |
Spop | mmu-miR-670 | beg:93 | end:114 | pic:3' AAGTGGTGTATGTGAGTCCCTA 5'& ||.||. .|. ||||||| &5' TTTACTCTGTG---TCAGGGA- 3' |
Spop | mmu-miR-673-3p | beg:1368 | end:1388 | pic:3' CCACGTGTCTTGAGTCGGGGCCT 5'& ||| ||| |.||.|| &5' --TGC-CAGCCAT--GTCCTGG- 3' |
Spop | mmu-miR-673-3p | beg:1238 | end:1261 | pic:3' CCACGTGTCTTGAG--TCGGGGCCT 5'& ||.. ||| ||. |||||.|| &5' --TGTG-AGATCTTGAAGCCCTGG- 3' |
Spop | mmu-miR-675-5p | beg:1431 | end:1452 | pic:3' TGACACCCGGGAAAGGCGTGGT 5'& ||||||. |||.||||| &5' ---GTGGGCTTCTTCTGCACC- 3' |
Spop | mmu-miR-681 | beg:1226 | end:1246 | pic:3' TCGACGGACGGTCGCTCCGAC 5'& || |||.|||| |.||| &5' AGATGCTTGCCTGTGAG---- 3' |
Spop | mmu-miR-682 | beg:560 | end:581 | pic:3' GTC-TGAAGTGACACTGACGTC 5'& .|| || |.||||| .|||| &5' TAGCAC-TTACTGT--TTGCA- 3' |
Spop | mmu-miR-686 | beg:22 | end:42 | pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||.|. || ||||||. &5' --TTTATTTTCCA-GAAGCAG- 3' |
Spop | mmu-miR-686 | beg:467 | end:489 | pic:3' AGAAGTGGCAGACC-CTTCGTTA 5'& ||.| .||. ||||||| &5' --TTTA-TGTTGAAAGAAGCAA- 3' |
Spop | mmu-miR-688 | beg:1224 | end:1245 | pic:3' CTTATTC-ATCAGCGGACGCT 5'& |.|| |. |.|||||.|| &5' ---TGAGATGCTTGCCTGTGA 3' |
Spop | mmu-miR-692 | beg:920 | end:945 | pic:3' CTCACTC-CGCGAG-TTTCTCTA 5'& ||| ||| | | .|.|||| &5' GAGAGAGAGAGAAAAGAGGAGA- 3' |
Spop | mmu-miR-692 | beg:873 | end:893 | pic:3' CTCACTCCGCGAGTTTCTCTA 5'& |.| |||| | .||||| &5' GGGAGAGGGGA---GAGAGA- 3' |
Spop | mmu-miR-711 | beg:1204 | end:1228 | pic:3' GAA-TGTAGAGAGGGGCCCAGGG 5'& ||| .| | ||| |..|||||. &5' CTTGGCTTGTCT-CTTGGGTCT- 3' |
Spop | mmu-miR-711 | beg:812 | end:835 | pic:3' GAATGT-AGAGAGGGGCCCAGGG 5'& |||. |.|||.||| |||| &5' -TTATTTTTTCTTCCCT--TCCC 3' |
Spop | mmu-miR-712 | beg:158 | end:179 | pic:3' CCATGGCGGGCCCACTTCCTC 5'& || |.||| ||.||| &5' GGGGGA--CTGGGGGAGGGA- 3' |
Spop | mmu-miR-743b-5p | beg:318 | end:339 | pic:3' ACTACCTGTGGTCAGACTTGT 5'& ||||. .| | ||||.|| &5' --ATGGGTGTCTGACTGAGCA 3' |
Spop | mmu-miR-762 | beg:1021 | end:1033 | pic:3' CGAGACAGGGCCGGGGTCGGGG 5'& .|||||||| &5' ------------TCCCAGCCC- 3' |
Spop | mmu-miR-762 | beg:1330 | end:1352 | pic:3' CGAGACAGGGC----CGG-GGTCGGGG 5'& |||.| ||. ||||||. &5' -----GTCTCACGCAGCTGCCAGCCT- 3' |
Spop | mmu-miR-7b | beg:1546 | end:1567 | pic:3' TGTTGTTTTAGTGTT-CAGAAGGT 5'& .|||| . ||||||. &5' -----GAAATTGTTGTGTCTTCT- 3' |
Spop | mmu-miR-877star | beg:867 | end:891 | pic:3' ACCCTCCTCCCTCTTCTC-CTGT 5'& |||| ||||||||.|.| || | &5' -GGGA-GAGGGAGAGGGGAGAGA 3' |
Spop | mmu-miR-96 | beg:1444 | end:1465 | pic:3' TCGTTTTTACACGATCACGGTTT 5'& ||| ||||. |||..|| &5' -GCACCC-TGTGT--GTGTTAA- 3' |
Spop | mmu-miR-433star | beg:224 | end:235 | pic:3' CTTATTACTGTCCGAGTGGCAT 5'& |||||||. &5' --------------TCACCGTG 3' |
Spop | mmu-miR-350 | beg:503 | end:522 | pic:3' CTTTCACATACCCG-AAACACTT 5'& |.||| |||||||| &5' -------TGTGGATATTTGTGAA 3' |