iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs13467206	snp	C/T	0.263672	0.249626	utr-variant-5-prime, synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054914	CTCTCGCCACAGGCT[C/T]CCGAGTGACGGCTTC	11993
rs13467207	snp	C/T			missense, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2, Dqx1	Mm_Celera	6:83056109	GAACTGCTGTGGTCC[C/T]TTTTTGTTCCTTTCA	11993
rs16807384	in-del	-/A	0.152778	0.230321	upstream-variant-2KB, downstream-variant-500B, frameshift-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83053063	TCTCACAGTTTGGAA[-/A]TTCTGGTGGTCCCCT	11993
rs16807385	snp	A/G	0.30839	0.243086	upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	GRCm38.p3	6:83052596	GGTGTGCTGGTAGAA[A/G]GTAAGGGAAAGAATG	11993
rs16807386	snp	A/G	0.090703	0.192677	intron-variant, upstream-variant-2KB	Aup1, Htra2	GRCm38.p3	6:83055499	GAGTAGAGGCTGAGA[A/G]CGGGgagaaaaagca	11993
rs16807387	snp	C/T	0.090703	0.192677	synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2, Dqx1	Mm_Celera	6:83056114	GCTGTGGTCCCTTTT[C/T]GTTCCTTTCACGGTG	11993
rs16807388	snp	A/T	0.197531	0.244432	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056159	CTAACTGTCCTCCGT[A/T]TTTGGTGGCTGGGAA	11993
rs16807389	snp	A/T	0.239198	0.249766	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056194	TTCACCTCAAGGGCA[A/T]GGAAGTAGTGACCAC	11993
rs16807390	in-del	-/C	0.172336	0.23763	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056221	CCACTATCCTGTCTG[-/C]NNNTGGTTTGTTAAT	11993
rs16807391	in-del	-/C	0.172336	0.23763	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056222	CACTATCCTGTCTGN[-/C]NNTGGTTTGTTAATG	11993
rs16807392	in-del	-/T	0.172336	0.23763	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056223	ACTATCCTGTCTGNN[-/T]NTGGTTTGTTAATGT	11993
rs16807393	in-del	-/G	0.172336	0.23763	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056224	CTATCCTGTCTGNNN[-/G]TGGTTTGTTAATGTC	11993
rs16807394	snp	C/T	0.244898	0.249948	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056319	AATGGGGAAGGGCCA[C/T]ACCCTTAGCCCCTGN	11993
rs16807395	snp	G/T	0.30839	0.243086	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056334	NACCCTTAGCCCCTG[G/T]CGACTTAACAGGGNA	11993
rs16807396	snp	C/T	0.090703	0.192677	intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056348	GNCGACTTAACAGGG[C/T]AGGGCTCTGGTTTTT	11993
rs16807397	snp	C/G	0.110727	0.207612	synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2, Dqx1	Mm_Celera	6:83056419	GAGTGAGGAGTTTGC[C/G]CTCCGTGTACAACAG	11993
rs16807398	snp	A/G	0.104938	0.20361	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053159	ANAAACAGGGTGTAG[A/G]GAAATTTTTCAATTC	11993
rs16807399	snp	C/T	0.090703	0.192677	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053247	GCCCAGTCACCACCA[C/T]GTGTCAGTTGGTGCT	11993
rs16807400	snp	A/T	0.090703	0.192677	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83053440	GATCGTGTTCTGCAG[A/T]GCAAANGGGCTTCCC	11993
rs16807401	snp	A/G	0.090703	0.192677	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83053446	GTTCTGCAGNGCAAA[A/G]GGGCTTCCCATGGCA	11993
rs16807402	snp	A/C	0.30839	0.243086	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053540	TTAAGGGAAACAAGG[A/C]CAGCAAAACNGGTCA	11993
rs16807403	snp	C/T	0.172336	0.23763	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053550	CAAGGNCAGCAAAAC[C/T]GGTCATTTTAAGAAG	11993
rs16807404	snp	C/T	0.090703	0.192677	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053584	GCAAGAGAACAGCTG[C/T]CATCAGATCTGGCCT	11993
rs16807405	snp	A/G	0.095	0.19615	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83053630	TGGTTTGAATCCTCA[A/G]TGTGGCAATGTCTGC	11993
rs16807406	snp	C/T	0.095	0.19615	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053833	CTGGGATGGGGAAAG[C/T]ACCNATTACACTGCA	11993
rs16807407	snp	C/G	0.188366	0.242283	upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053837	GATGGGGAAAGNACC[C/G]ATTACACTGCAGCTT	11993
rs16807408	snp	G/T	0.18	0.24	upstream-variant-2KB, missense	Aup1, Htra2	GRCm38.p3	6:83054045	CCAGCACCGTGGAAA[G/T]ACCCCGACCCCAACC	11993
rs16807409	snp	C/T	0.099723	0.199792	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	GRCm38.p3	6:83054085	CAGCACCACTGCACC[C/T]CCTGCGCCCACCGCC	11993
rs16807410	snp	A/G	0.099723	0.199792	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	GRCm38.p3	6:83054133	CCGACGGCTTCCAGG[A/G]CTCCTGCGGGCCTCC	11993
rs16807411	snp	G/T	0.095	0.19615	upstream-variant-2KB, missense	Aup1, Htra2	GRCm38.p3	6:83054176	CCTGAAGTCCCCACA[G/T]TCAATCGTGCCCAGA	11993
rs16807412	snp	A/C	0.099723	0.199792	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83054196	TCGTGCCCAGAGATC[A/C]GGGGTCCTAGACGTC	11993
rs16807414	snp	G/T	0.090703	0.192677	utr-variant-5-prime, synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054956	GCTACTGCTCTACGC[G/T]CCGGTCGGCCTCTGC	11993
rs16807415	snp	A/G	0.090703	0.192677	intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83055071	CCGCGGCGCCCGGGG[A/G]AGCATCGGGGCTGGG	11993
rs16807416	snp	A/G	0.090703	0.192677	intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83055089	CATCGGGGCTGGGCT[A/G]GGCTCNGGACCGCAC	11993
rs16807417	snp	C/T	0.172336	0.23763	intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83055095	GGCTGGGCTNGGCTC[C/T]GGACCGCACGGTCAC	11993
rs45763754	snp	A/G	0.297521	0.245442	intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83054875	TCAGCGCGTCCTGTC[A/G]GCTTCGGCGCCTGAT	11993
rs47318828	snp	C/T	0.375	0.216506	utr-variant-5-prime, nc-transcript-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83054541	GCGCATGCCGGGAAA[C/T]GTAGTCCCGTCAGGA	11993
rs49433337	snp	C/T	0.231111	0.249285	downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime	Aup1, Dqx1	Mm_Celera	6:83057769	ATGGGTGAGAATGGT[C/T]AAAATGGAACTGTGA	11993
rs50711860	snp	A/G	0.391111	0.206368	intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83057416	GGGTTAGAGGACAAT[A/G]TGTGAGAAAGAACAA	11993
rs50787021	snp	C/T	0.391111	0.206368	downstream-variant-500B, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83057699	GTCTCTGTTGCCTCT[C/T]TGGGTTTCAAAAGCC	11993
rs50816551	snp	A/G	0.32	0.24	intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83056896	ATGGGAAAGGGTAGC[A/G]TCACAGAATGGCAGA	11993
rs51169831	snp	A/G	0.391111	0.206368	intron-variant, upstream-variant-2KB, nc-transcript-variant	Aup1, Dqx1	Mm_Celera	6:83057229	GCATTCGATGGGTGT[A/G]TAATGATGATGACTT	11993
rs51312670	snp	C/T	0.32	0.24	intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83057102	CCCAAAGGTGAGACC[C/T]GGAGTAGTCAAGGCC	11993
rs51899183	snp	C/G	0.35503	0.226867	upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83053715	CACTCGTACTCGGCG[C/G]CGATCAGCCACCACG	11993
rs214596684	snp	G/T			utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054694	TTCTGGCGTCTCGGC[G/T]GATGCCCAAAGACTC	11993
rs216093139	in-del	-/TT			intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83055452	GTCTTTTCCTTTCTC[-/TT]TCTCTTTTTGACATT	11993
rs217713082	in-del	-/AG			intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056447	CAGGTGGTAGTGAAC[-/AG]GGGTGTGGTGGAAGT	11993
rs218179097	snp	A/G			synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Dqx1	Mm_Celera	6:83057066	CACTGAGGGATCTCA[A/G]TCCCCGCCTGCACCC	11993
rs219769091	snp	C/T			upstream-variant-2KB, missense	Aup1, Htra2	GRCm38.p3	6:83054248	AACCCCTCAGGCACC[C/T]GGGCCGGGAGACTGG	11993
rs219911129	snp	C/T			intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83055453	TCTTTTCCTTTCTCT[C/T]TCTCTTTTTGACATT	11993
rs225451238	snp	A/T			downstream-variant-500B, utr-variant-5-prime, intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83058025	AGTTTGAGCTCAGCC[A/T]CCCGGATGGGGCCGG	11993
rs229738170	in-del	-/CG			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83052568	AGAGGACAAATGAAC[-/CG]CCCCCCAGCTACATT	11993
rs233130197	snp	A/C			upstream-variant-2KB, utr-variant-5-prime	Aup1, Htra2	GRCm38.p3	6:83054440	ATCAGCTCCGCCTCG[A/C]CTCTCCTCGCCCGCC	11993
rs233979039	snp	C/G			utr-variant-5-prime, synonymous-codon, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054806	TCCCCCAGCTCCGGG[C/G]CCGGAGCGGCTCTTT	11993
rs236483708	snp	A/G			upstream-variant-2KB, missense	Aup1, Htra2	GRCm38.p3	6:83054282	TCCCATAAGTCATCC[A/G]GATCTGAGAGTCAGG	11993
rs237652632	snp	A/C			downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime	Aup1, Dqx1	Mm_Celera	6:83057795	TGTGAAATTACACTA[A/C]ACTGAAGACAAAACA	11993
rs238897912	snp	A/G			upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83054355	GGGAGGCTTCCTCCA[A/G]AAGATGCCCCCCAAA	11993
rs245024111	snp	C/T			upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053901	GCAGTTCAACACCTC[C/T]TGGTCAACTTCACCA	11993
rs245177463	snp	C/T			utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054619	CATACACACACATTC[C/T]CCGGGGCCGCGAGGC	11993
rs246781184	in-del	-/GTCT			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83052895	GATTTGGGGACAGAA[-/GTCT]GTCTGTCTGTCTGTC	11993
rs248679198	snp	C/T			upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053187	ATTCCATTCCTAGCA[C/T]ATGAACTAGAGAGGC	11993
rs249563226	snp	C/T			downstream-variant-500B, intron-variant, upstream-variant-2KB, utr-variant-5-prime	Aup1, Dqx1	Mm_Celera	6:83058170	CATTAATGGCCCTAC[C/T]TACTGTCCCCTTCTC	11993
rs249817430	snp	C/T			upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83054319	TGACGTCAGCAGAGC[C/T]CGGAGGTCAGGAGCT	11993
rs250208793	in-del	-/GTCTGTCT			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83052894	GATTTGGGGACAGAA[-/GTCTGTCT]GTCTGTCTGTCTGTC	11993
rs250783976	snp	A/G			downstream-variant-500B, upstream-variant-2KB, utr-variant-5-prime	Aup1, Dqx1	Mm_Celera	6:83057763	TACAATATGGGTGAG[A/G]ATGGTCAAAATGGAA	11993
rs250803035	snp	A/C			downstream-variant-500B, utr-variant-5-prime, intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83058066	TGTACTCCAGGGAGG[A/C]CTGGGTTGGTGTGCC	11993
rs251792117	in-del	-/G			intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056464	GGGTGTGGTGGAAGT[-/G]GGGGGGTCCCTCCCT	11993
rs252488046	in-del	-/G			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83052569	GAGGACAAATGAACC[-/G]CCCCCCAGCTACATT	11993
rs253279294	snp	A/G			intron-variant, upstream-variant-2KB	Aup1, Htra2	Mm_Celera	6:83054844	ACCGGTAAGCGCTGC[A/G]GAGGGAAGAGACCGG	11993
rs254638249	snp	A/G			upstream-variant-2KB, intron-variant	Aup1, Htra2	Mm_Celera	6:83053827	GGGTGCCTGGGATGG[A/G]GAAAGTACCCATTAC	11993
rs255034608	snp	A/G			upstream-variant-2KB, missense	Aup1, Htra2	GRCm38.p3	6:83054296	CAGATCTGAGAGTCA[A/G]GAGTTCCTGACGTCA	11993
rs255773204	snp	C/T			upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83054238	TGATGCAAGGAACCC[C/T]TCAGGCACCTGGGCC	11993
rs257769066	in-del	-/CT			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	Mm_Celera	6:83052570	GGACAAATGAACCGC[-/CT]CCCCCAGCTACATTC	11993
rs258288605	snp	C/T			intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83056898	GGGAAAGGGTAGCAT[C/T]ACAGAATGGCAGACA	11993
rs259973904	snp	C/G			upstream-variant-2KB, utr-variant-5-prime	Aup1, Htra2	Mm_Celera	6:83054468	GCCCTACTCAGAGGC[C/G]GTCCTCTAGAACCCG	11993
rs261299156	in-del	-/CTGC			intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056218	TGACCACTATCCTGT[-/CTGC]CTGTGGTTTGTTAAT	11993
rs261407011	snp	G/T			upstream-variant-2KB, utr-variant-5-prime	Aup1, Htra2	Mm_Celera	6:83054490	TAGAACCCGGCAAGC[G/T]GTCTAGGAGAAGCAG	11993
rs263150059	snp	C/T			downstream-variant-500B, utr-variant-5-prime, intron-variant, upstream-variant-2KB	Aup1, Dqx1	Mm_Celera	6:83057884	TGCATTTCATGACTA[C/T]AGTCATATAGGCTCA	11993
rs263189930	in-del	-/AC			utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	Mm_Celera	6:83054595	CACGCTCACACACAA[-/AC]ACACACACATACACA	11993
rs263579129	snp	C/T			upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83053706	AGGCAGCCTCACTCG[C/T]ACTCGGCGCCGATCA	11993
rs265706617	snp	G/T			upstream-variant-2KB, synonymous-codon	Aup1, Htra2	Mm_Celera	6:83054358	AGGCTTCCTCCAGAA[G/T]ATGCCCCCCAAAGCC	11993
rs265784235	in-del	-/GG			intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	Mm_Celera	6:83056463	GGGTGTGGTGGAAGT[-/GG]GGGGGGGTCCCTCCC	11993
rs581993427	snp	A/G			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	GRCm38.p3	6:83052566	AAAGAGGACAAATGA[A/G]CCGCCCCCCAGCTAC	11993
rs584759870	snp	A/G			intron-variant, upstream-variant-2KB	Aup1, Htra2, Dqx1	GRCm38.p3	6:83056460	ACAGGGGTGTGGTGG[A/G]AGTGGGGGGGTCCCT	11993
rs586613209	snp	A/C			utr-variant-5-prime, upstream-variant-2KB, nc-transcript-variant	Aup1, Htra2	GRCm38.p3	6:83054582	TCCAGCATACGCACA[A/C]GCTCACACACAAACA	11993
rs864263817	snp	C/T			intron-variant, upstream-variant-2KB	Aup1, Dqx1	GRCm38.p3	6:83056960	CAGGGAGTGGACACT[C/T]TGCCCCTCTCTTCCC	11993
rs864263983	snp	A/T			upstream-variant-2KB, downstream-variant-500B, intron-variant	Aup1, Loxl3, Htra2	GRCm38.p3	6:83052690	CTTTCCCTGTAAGAC[A/T]GGCTCACTTTTCTTT	11993
rs864282264	snp	A/G			upstream-variant-2KB, intron-variant	Aup1, Htra2	GRCm38.p3	6:83053184	CAAATTCCATTCCTA[A/G]CACATGAACTAGAGA	11993

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