DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Cass4 ATTTA 177-2234 3573-3577

DNA & RNA Element - miRTarBase Target Gene (Entrez ID) miRTarBase ID miRNA Species (miRNA) Target Gene Species (Target Gene) Experiments Support Type References (PMID) MIRT602652 mmu-miR-337-3p Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT606506 mmu-miR-681 Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT602654 mmu-miR-874-3p Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT602655 mmu-miR-1195 Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT602651 mmu-miR-1950 Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT602653 mmu-miR-3074-5p Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322 MIRT602656 mmu-miR-3089-5p Mus musculus Cass4 320664 Mus musculus HITS-CLIP Functional MTI (Weak) 21258322

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004522 mmu-miR-27b* 320664 Cass4 caAGUGGUUAGUCGAUUC-GAGa |:| :|| ::|||||| ||| ugUUAGUAAGUGGCUAAGCCUCc 2 21 101 123 [mm9:2:172258244-172258266:+] 0.5863 132 0 -16.81 -0.2959 MIMAT0004523 mmu-miR-29b* 320664 Cass4 auUUGGUGGUAUACUUUGGUCg |:::| |||| ||||||| caAGUUAACAUA--AAACCAGc 2 21 905 924 [mm9:2:172254462-172254481:+] 0.5000 157 7 -17.43 -0.3053 MIMAT0004529 mmu-miR-125b* 320664 Cass4 uccaGGGUUC-UU--GGAC-UGAACa ||||:| || ::|| ||||| guugCCCAGGCAAGCUUUGAACUUGg 2 19 478 503 [mm9:2:172254035-172254060:+] 0.5008 120 0 -18.67 -0.1028 MIMAT0000218 mmu-miR-24-1* 320664 Cass4 ugacUAUAGUCGAGUCAUCCGUg | || | |||||||||| caauAAAUGA-AUCAGUAGGCAg 2 20 1297 1318 [mm9:2:172254854-172254875:+] 0.5199 157 7 -20.16 -0.5743 MIMAT0004572 mmu-miR-290-3p 320664 Cass4 cccgaauuuugAUCCGCCGUGAAa || | ||||||| ucccuaccuuaUAAG-GGCACUUu 2 14 840 862 [mm9:2:172254397-172254419:+] 0.5000 143 7 -11.87 -0.1889 MIMAT0000370 mmu-miR-292-3p 320664 Cass4 ugugaguuuuggaccgCCGUGAAa ||||||| aucccuaccuuauaagGGCACUUu 2 9 839 862 [mm9:2:172254396-172254419:+] 0.5000 140 7 -15.38 -0.2069 MIMAT0004574 mmu-miR-294* 320664 Cass4 ucuaucccGGAGGUAAAACUCa |||::|||||||| cuuuuuacCCUUUAUUUUGAGa 2 15 442 463 [mm9:2:172253999-172254020:+] 0.5008 162 7 -17.55 -0.7172 MIMAT0004574 mmu-miR-294* 320664 Cass4 ucuaucCCGGAGGUAAAACUCa |||:|: ||||||| ucuccuGGCUUU--UUUUGAGu 2 17 210 229 [mm9:2:172253767-172253786:+] 0.5008 149 7 -14.35 -0.3013 MIMAT0004575 mmu-miR-295* 320664 Cass4 cuucACACGGGGUGU-AAACUCa | | |||: :| |||||| ucuuUUUACCCUUUAUUUUGAGa 2 19 441 463 [mm9:2:172253998-172254020:+] 0.5008 122 6 -13.25 -0.4597 MIMAT0000376 mmu-miR-298 320664 Cass4 ccCU-UCUUGUCGGGA--GGAGACGg || | | | |:::| ||||||| gaGAUACACCUGUUUUCACCUCUGCc 2 22 339 364 [mm9:2:172253896-172253921:+] 0.5008 147 7 -22.38 -0.2296 MIMAT0000376 mmu-miR-298 320664 Cass4 cccuucuugucgGGAGGAGACGg || ||||||| uuuucaccucugCCACCUCUGCc 2 12 351 373 [mm9:2:172253908-172253930:+] 0.5008 147 7 -23.02 -0.1444 MIMAT0004583 mmu-miR-130b* 320664 Cass4 ucaucacguuguccCUUUCUCa ||||||| gaccacgaggucaaGAAAGAGa 2 9 138 159 [mm9:2:172258281-172258302:+] 0.5634 140 7 -13.09 -0.7059 MIMAT0004617 mmu-miR-148a* 320664 Cass4 ucagccucACAGA--GUCUUGAAa ||||| :||||||| cagccugcUGUCUUAUAGAACUUa 2 15 727 750 [mm9:2:172254284-172254307:+] 0.5008 153 7 -13.55 -0.6921 MIMAT0005440 mmu-miR-24-2* 320664 Cass4 ugacaaagucgAGUCAUCCGUg |||||||||| caauaaaugaaUCAGUAGGCAg 2 12 1297 1318 [mm9:2:172254854-172254875:+] 0.5199 155 7 -18.22 -0.5779 MIMAT0004653 mmu-miR-342-5p 320664 Cass4 gagUUAGUGUCUAUCGUGGGGa || | ||| |||||||| auaAAAC-CAGCCAGCACCCCu 2 20 914 934 [mm9:2:172254471-172254491:+] 0.5000 157 7 -23.04 -0.2078 MIMAT0004664 mmu-miR-214* 320664 Cass4 cgUGUCGUUCACAUCUGUCCGu | ||| :| | |||||||| ccAGAGCUGGAG-AGACAGGCu 2 21 102 122 [mm9:2:172253659-172253679:+] 0.5008 158 7 -22.01 -0.1222 MIMAT0004665 mmu-miR-218-1* 320664 Cass4 ccaCGAACUGCCUUGGUACAAa || ||: ||||||| accGCCAGAUCUCUCCAUGUUc 2 20 969 990 [mm9:2:172254526-172254547:+] 0.5000 143 7 -11.57 -0.1089 MIMAT0003387 mmu-miR-376a* 320664 Cass4 ugAGUAUCUUCCUCUUAGA-UGg |||| ||| | ||||| || aaUCAU-GAA-CAAAAUCUCACa 2 21 1319 1339 [mm9:2:172254876-172254896:+] 0.5114 120 0 -8.54 -1.0264 MIMAT0001421 mmu-miR-434-5p 320664 Cass4 acCAAGUUUGGUACUCAGC-UCg |||| |:|: |||||| || auGUUCCAGCUUGGAGUCGUAGu 2 21 985 1007 [mm9:2:172254542-172254564:+] 0.5000 132 0 -20.01 -0.3143 MIMAT0003409 mmu-miR-467a 320664 Cass4 gcguauauGUACGUCCGUGAAu :|| :||||||| cccuaccuUAUAAGGGCACUUu 2 15 841 862 [mm9:2:172254398-172254419:+] 0.5000 146 7 -14.56 -0.1993 MIMAT0003120 mmu-miR-483* 320664 Cass4 uucugcccuccccUCCUCACu ||||||| gcagaggcuauaaAGGAGUGg 2 9 686 706 [mm9:2:172254243-172254263:+] 0.5008 140 7 -18.05 -0.2218 MIMAT0003166 mmu-miR-546 320664 Cass4 cugaGGCACGGUGGUa ::||||||||| aggcUUGUGCCACCAc 2 13 118 133 [mm9:2:172253675-172253690:+] 0.5008 152 7 -22.89 -0.1059 MIMAT0003166 mmu-miR-546 320664 Cass4 cugaGGCA-CGGUGGUa || | ||||||| cagcCCUUGGCCACCAa 2 13 1277 1293 [mm9:2:172254834-172254850:+] 0.5149 143 7 -15.71 -0.2269 MIMAT0003376 mmu-miR-302c 320664 Cass4 gguGACUUUGUAC-CUUCGUGAa || | || || ||||||| gucCUUAUACUUGCAAAGCACUu 2 20 173 195 [mm9:2:172253730-172253752:+] 0.5008 154 7 -12.92 -0.5456 MIMAT0005460 mmu-miR-1224 320664 Cass4 gaGGUGGAGGGGUCAGG-AGUg |||| | | :||||| ||| ugCCACAU-CAUAGUCCAUCAc 2 20 608 628 [mm9:2:172254165-172254185:+] 0.5008 125 0 -24.57 -0.3352 MIMAT0003733 mmu-miR-665 320664 Cass4 uccCUGGAGUCGGAGGACCa || || |:||||||| auuGAACU--GUCUCCUGGc 2 18 201 218 [mm9:2:172253758-172253775:+] 0.5008 150 7 -18.97 -0.4703 MIMAT0003897 mmu-miR-759 320664 Cass4 caGUUUUAACAAACGU-GAGACg :| | ||||| || ||||| gaUACACCUGUUUUCACCUCUGc 2 21 341 363 [mm9:2:172253898-172253920:+] 0.5008 128 0 -15.23 -0.1323 MIMAT0004824 mmu-miR-673-3p 320664 Cass4 ccacGUGUCUUGAGUCG-GGGCCu ::|:||: || || ||||| agccUGCGGAGGUCCGCUCCCGGc 2 20 1 24 [mm9:2:172258144-172258167:+] 0.5330 127 0 -24.98 -0.2883 MIMAT0003451 mmu-miR-677 320664 Cass4 agUCUUCGAUUAGUAGUGACUu ||| |||:| | ||||||| ugAGAUGCUGAAC-UCACUGAg 2 21 182 202 [mm9:2:172258325-172258345:+] 0.5332 166 7 -20.23 -0.1395 MIMAT0003471 mmu-miR-692 320664 Cass4 cucaCUCCGCGAGUUUCUCUa ||||: ||||||| ccacGAGGUCAAGAAAGAGAg 2 18 140 160 [mm9:2:172258283-172258303:+] 0.5634 149 7 -13.90 -0.1507 MIMAT0003495 mmu-miR-705 320664 Cass4 acggguggggUGGAGGGUGg :|||||||| ugggcgggggGCCUCCCACa 2 11 780 799 [mm9:2:172254337-172254356:+] 0.5004 146 7 -19.32 -0.1276 MIMAT0003496 mmu-miR-706 320664 Cass4 aaaAAACUCUGUCCCAAAGAGa || ||| |: ||||||| agcUUGGAGUCGUAGUUUCUCa 2 20 992 1013 [mm9:2:172254549-172254570:+] 0.5000 159 7 -14.49 -0.4105 MIMAT0003498 mmu-miR-708* 320664 Cass4 gaucuUCGAGUGUCAG-AUCAAc ||||:: |||| ||||| guuccAGCUUGGAGUCGUAGUUu 2 18 987 1009 [mm9:2:172254544-172254566:+] 0.5000 133 0 -15.51 -0.1137 MIMAT0003499 mmu-miR-709 320664 Cass4 agGAGGACGGAGACGGAGg || | |||||||||| cuCUGCCACCUCUGCCUCc 2 18 358 376 [mm9:2:172253915-172253933:+] 0.5008 161 7 -28.94 -0.1033 MIMAT0004210 mmu-miR-804 320664 Cass4 agguccACUCCUUG--UUGAGUGu |||| :| ||||||| agaccuUGAGAUGCUGAACUCACu 2 17 176 199 [mm9:2:172258319-172258342:+] 0.5332 147 7 -16.35 -0.2122 MIMAT0004210 mmu-miR-804 320664 Cass4 agguccacuccuugUUGAGUGu ||||||| uggcccuguccuggAACUCACa 2 9 317 338 [mm9:2:172253874-172253895:+] 0.5008 140 7 -18.09 -0.1219 MIMAT0004237 mmu-miR-742 320664 Cass4 aaauggGUCGUACCACCGAAAg | |: | ||||||| auugaaCUGUCUCCUGGCUUUu 2 17 201 222 [mm9:2:172253758-172253779:+] 0.5008 144 7 -10.81 -0.1715 MIMAT0004842 mmu-miR-879 320664 Cass4 ccgAAUC--UCGAU-AUUCGGAGa |||| ||: : |||||||| gugUUAGUAAGUGGCUAAGCCUCc 2 19 100 123 [mm9:2:172258243-172258266:+] 0.5863 152 7 -15.48 -0.2494 MIMAT0004863 mmu-miR-220 320664 Cass4 uucACAGACUGUGACACCACc | |:||| ||||||| cuuUUUUUGAGUGUGUGGUGu 2 19 218 238 [mm9:2:172253775-172253795:+] 0.5008 154 7 -13.81 -0.1486 MIMAT0004893 mmu-miR-574-5p 320664 Cass4 ugUGUGAGUGUGUGUGUGUGAGu | || :||: |||||||| cuAGACGAGCAUCGACACACUCu 2 22 1199 1221 [mm9:2:172254756-172254778:+] 0.5102 157 7 -19.64 -0.2612 MIMAT0004893 mmu-miR-574-5p 320664 Cass4 ugUGUGAGUG-UGUGUGU-GUGAGu :| | ||: ||| || ||||| guGCCCCCAUGACAGUCACCACUCu 2 22 419 443 [mm9:2:172253976-172254000:+] 0.5008 120 0 -15.47 -0.3675 MIMAT0005833 mmu-miR-669d 320664 Cass4 uguaUAUGUACG-UGUGU-GUUCa || :| || ||||| |||| gccaAUCUAGGCUACACAGCAAGa 2 19 1429 1452 [mm9:2:172254986-172255009:+] 0.5011 125 0 -12.74 -0.4120 MIMAT0005841 mmu-miR-669h-5p 320664 Cass4 cgugaguugAUAUGUGGGUAC-GUa |:|:| |||||| || uuagaugcaUGUGCCCCCAUGACAg 2 16 409 433 [mm9:2:172253966-172253990:+] 0.5008 123 0 -15.22 -0.1035 MIMAT0005843 mmu-miR-1188 320664 Cass4 agGACCGGGUUGGAGUGUGGu | || |||:::||||||| ucCCGG-CCAGUUUCACACCc 2 20 18 37 [mm9:2:172258161-172258180:+] 0.5330 161 7 -27.79 -0.6224 MIMAT0005855 mmu-miR-467h 320664 Cass4 uguauaUGUACGUGUGUGA-AUa :||| ||||||| || agacgaGCAUCGACACACUCUAg 2 17 1201 1223 [mm9:2:172254758-172254780:+] 0.5102 124 0 -13.06 -0.1692 MIMAT0007872 mmu-miR-1906 320664 Cass4 ucGGGACGGAGUCC---GACGACGu :||| || ||| ||||||| gcUCCUUCC-AAGGUCCCUGCUGCu 2 21 1177 1200 [mm9:2:172254734-172254757:+] 0.5102 149 7 -22.57 -0.2418 MIMAT0007872 mmu-miR-1906 320664 Cass4 ucGGGACGGAGUCCGA-CGACGu | :|| ||| |||| ||||| aaCAUUG-CUCUGGCUGGCUGCc 2 21 1083 1104 [mm9:2:172254640-172254661:+] 0.5099 130 0 -22.51 -0.1420 MIMAT0007876 mmu-miR-1907 320664 Cass4 ugGAGG-UCUAGGAGACGACGAg :||| ||:||| |||||||| ccUUCCAAGGUCC-CUGCUGCUa 2 21 1180 1201 [mm9:2:172254737-172254758:+] 0.5102 169 7 -32.96 -0.2784 MIMAT0009390 mmu-miR-1927 320664 Cass4 agUCAGG-GAUUG-UAGGU-CUCCAg || || ||:|| : ||| ||||| gaAGGCCACUGACUGACCACGAGGUc 2 22 124 149 [mm9:2:172258267-172258292:+] 0.5634 127 0 -25.62 -0.3964 MIMAT0009392 mmu-miR-1929 320664 Cass4 gaGACGAGAU---AUUUCAGGAUCUu |||| :|| | |||||||| ucCUGCCUUAGCCUCCUGUCCUAGAu 2 22 509 534 [mm9:2:172254066-172254091:+] 0.5008 152 7 -20.12 -0.1358 MIMAT0009396 mmu-miR-1933-5p 320664 Cass4 uuUGAUUC--UGGCUUGUGGU-ACUGa :||||| ||||| :||| |||| ugGCUAAGCCUCCGAAGGCCACUGACu 2 23 111 137 [mm9:2:172258254-172258280:+] 0.5863 137 0 -28.72 -0.1950 MIMAT0009396 mmu-miR-1933-5p 320664 Cass4 uuUGAUUCUGGCUUGUGGUACUGa :||| ||| |:||||||||| uuGCUAUGACAAAGCACCAUGACc 2 23 545 568 [mm9:2:172254102-172254125:+] 0.5008 178 7 -26.98 -0.5884 MIMAT0009396 mmu-miR-1933-5p 320664 Cass4 uuugauucuggcuuGUGGUACUGa | ||||||| uuagaugcaugugcCCCCAUGACa 2 11 409 432 [mm9:2:172253966-172253989:+] 0.5008 142 7 -12.76 -0.1355 MIMAT0009399 mmu-miR-1935 320664 Cass4 ucucuagGCGGUCGGAGACGGa :|:| |:||||||| ugugcagUGUCUGUCUCUGCCu 2 16 236 257 [mm9:2:172253793-172253814:+] 0.5008 155 7 -24.96 -0.2807 MIMAT0009404 mmu-miR-1940 320664 Cass4 uuGACGAGGUGGAAGAGUC-AG-GAGGUa ||||| ||| | ||| || ||||| ugCUGCU-GACC-GC-CAGAUCUCUCCAu 2 26 961 986 [mm9:2:172254518-172254543:+] 0.5000 122 0 -26.67 -0.1601 MIMAT0009405 mmu-miR-1941-5p 320664 Cass4 uucgGAGACAUGGUCGUAGAGGGa :|:|| : ||| ||||||| uuuaUUUUGAGACAGGAUCUCCCu 2 21 452 475 [mm9:2:172254009-172254032:+] 0.5008 164 7 -25.31 -0.2008 MIMAT0009412 mmu-miR-1946a 320664 Cass4 uuuUCACACACGGUGGUGACGGG-CCGa || | | || ::||||| ||| gacAGGAUCUCCCUAAGUUGCCCAGGCa 2 25 462 489 [mm9:2:172254019-172254046:+] 0.5008 120 0 -19.71 -0.1802 MIMAT0009417 mmu-miR-1950 320664 Cass4 acugguauaggaauCUACGUCu ||||||| uggaggcaggagcuGAUGCAGa 2 9 669 690 [mm9:2:172254226-172254247:+] 0.5008 140 7 -14.81 -0.2240 MIMAT0009432 mmu-miR-1959 320664 Cass4 gaggUGACUCGAUGUAGGGg :|| : ||||||||| acagGCUUGCCUACAUCCCu 2 17 825 844 [mm9:2:172254382-172254401:+] 0.5000 156 7 -18.47 -0.3103 MIMAT0011212 mmu-miR-2136 320664 Cass4 guguagaGUC-AGUUGUGGGUc ||| |: ||||||| ucccggcCAGUUUCACACCCAc 2 15 18 39 [mm9:2:172258161-172258182:+] 0.5330 149 7 -18.04 -0.1815 MIMAT0012774 mmu-miR-664 320664 Cass4 auccgaccccUCAUUUACUUAu | ||||||||| caccaaagccAAUAAAUGAAUc 2 13 1288 1309 [mm9:2:172254845-172254866:+] 0.5199 152 7 -6.59 -0.3665 MIMAT0015642 mmu-miR-3471 320664 Cass4 uuACGGAAUGUCAACCUAGAGu | ::||: : ||||||| uuUAUUUUGAGACAGGAUCUCc 2 21 452 473 [mm9:2:172254009-172254030:+] 0.5008 144 7 -12.98 -0.3543 MIMAT0015642 mmu-miR-3471 320664 Cass4 uuACGGAAUGUC-AACCUAGAGu ||::| : :| ||||||| uuUGUUUGGGGGACAGGAUCUCa 2 21 289 311 [mm9:2:172253846-172253868:+] 0.5008 143 7 -17.33 -0.3410 MIMAT0015645 mmu-miR-3473 320664 Cass4 ccGACU--CGG--UAGAGAGGu |||| ||| |||||||| ugCUGACCGCCAGAUCUCUCCa 2 17 964 985 [mm9:2:172254521-172254542:+] 0.5000 154 7 -25.41 -0.2641 MIMAT0000124 mmu-miR-15b 320664 Cass4 acauuuGGUACUA--CACGACGAu ||| |:| ||||||| cuccuuCCAAGGUCCCUGCUGCUa 2 17 1178 1201 [mm9:2:172254735-172254758:+] 0.5102 147 7 -17.43 -0.2784 MIMAT0000146 mmu-miR-134 320664 Cass4 ggggagaccaguugGUCAGUGu ||||||| augugcccccaugaCAGUCACc 2 9 417 438 [mm9:2:172253974-172253995:+] 0.5008 140 7 -20.39 -0.3460 MIMAT0000158 mmu-miR-146a 320664 Cass4 uuggGUACCUUA-AGUC-AAGAGu | ||||:| :|| ||||| ccagCUUGGAGUCGUAGUUUCUCa 2 19 990 1013 [mm9:2:172254547-172254570:+] 0.5000 121 0 -19.50 -0.2611 MIMAT0000163 mmu-miR-153 320664 Cass4 cuagUGAAAACACUGAUAC-GUu ::|| ||| :||||| || uaggGUUUCUGUUGCUAUGACAa 2 19 534 556 [mm9:2:172254091-172254113:+] 0.5008 126 0 -11.63 -0.2939 MIMAT0000214 mmu-miR-185 320664 Cass4 aguccUUGACGG-AAAGAGAGGu :|| ||| ||||||| cugcuGACCGCCAGAUCUCUCCa 2 18 963 985 [mm9:2:172254520-172254542:+] 0.5000 148 7 -19.18 -0.2572 MIMAT0000219 mmu-miR-24 320664 Cass4 gacaaggACGACU----UGACUCGGu |||||| |||||||| cuugagaUGCUGAACUCACUGAGCCg 2 16 180 205 [mm9:2:172258323-172258348:+] 0.5332 154 7 -25.32 -0.2512 MIMAT0000223 mmu-miR-193 320664 Cass4 ugacccugaaacauCCGGUCAa ||||||| ggagguccgcucccGGCCAGUu 2 9 8 29 [mm9:2:172258151-172258172:+] 0.5330 140 7 -17.83 -0.6627 MIMAT0000225 mmu-miR-195 320664 Cass4 cgguuauaaAGACACGACGAu || ||||||| cuuccaaggUCCCUGCUGCUa 2 13 1181 1201 [mm9:2:172254738-172254758:+] 0.5102 144 7 -19.15 -0.2881 MIMAT0000368 mmu-miR-291a-3p 320664 Cass4 cguGUGUUUCACC--UUCGUGAAa | :| | | | |||||||| gucCUUAUACUUGCAAAGCACUUu 2 20 173 196 [mm9:2:172253730-172253753:+] 0.5008 146 7 -13.48 -0.5740 MIMAT0000372 mmu-miR-294 320664 Cass4 uguGUGUUUUCCCUUCGUGAAa :|:| | |||||||| ccuUAUACUUGCAAAGCACUUu 2 20 175 196 [mm9:2:172253732-172253753:+] 0.5008 147 7 -13.43 -0.5813 MIMAT0000373 mmu-miR-295 320664 Cass4 ucuGAGUUUUCAU-CAUCGUGAAa ||:| | |: ||||||| gucCUUAUACUUGCAAAGCACUUu 2 21 173 196 [mm9:2:172253730-172253753:+] 0.5008 143 7 -10.82 -0.5776 MIMAT0004577 mmu-miR-299 320664 Cass4 uuCGCCAAAUGGCAGGGUGUAu |||| :|| |||||||| ggGCGGGGGGCC-UCCCACAUc 2 21 781 801 [mm9:2:172254338-172254358:+] 0.5004 158 7 -27.65 -0.1556 MIMAT0000380 mmu-miR-302a 320664 Cass4 aguGGUUUUGUAC-CUUCGUGAAu |: | || || |||||||| gucCUUAUACUUGCAAAGCACUUu 2 21 173 196 [mm9:2:172253730-172253753:+] 0.5008 155 7 -13.48 -0.5704 MIMAT0000381 mmu-miR-34c 320664 Cass4 cguuAGUCGAUUG-AUGUGACGGa ||| :|::| ||||||||| agguUCAUUUGGCUUACACUGCCa 2 20 589 612 [mm9:2:172254146-172254169:+] 0.5008 166 7 -21.38 -0.7222 MIMAT0000382 mmu-miR-34b-5p 320664 Cass4 uguuAGUCGAUU-AAUGUGACGGa ||| :|:: |||||||||| agguUCAUUUGGCUUACACUGCCa 2 20 589 612 [mm9:2:172254146-172254169:+] 0.5008 166 7 -19.74 -0.7222 MIMAT0000385 mmu-miR-106a 320664 Cass4 gaUGGACGUGACAAUCGUGAAAc ||:|||| |||||||| auACUUGCA----AAGCACUUUa 2 22 179 197 [mm9:2:172253736-172253754:+] 0.5008 152 7 -19.30 -0.7890 MIMAT0000385 mmu-miR-106a 320664 Cass4 gauGGACGUGACAAU--CGUGAAAc ||| | :| | | ||||||| aucCCUACCUUAUAAGGGCACUUUc 2 21 839 863 [mm9:2:172254396-172254420:+] 0.5000 151 7 -17.65 -0.1116 MIMAT0000386 mmu-miR-106b 320664 Cass4 uaGACGUGACAG--UCGUGAAAu :| :||| | |||||||| ccUUAUACUUGCAAAGCACUUUa 2 20 175 197 [mm9:2:172253732-172253754:+] 0.5008 150 7 -16.91 -0.7890 MIMAT0000386 mmu-miR-106b 320664 Cass4 uaGACGUGACAGU--CGUGAAAu || | :| | | ||||||| ccCUACCUUAUAAGGGCACUUUc 2 20 841 863 [mm9:2:172254398-172254420:+] 0.5000 146 7 -10.61 -0.1116 MIMAT0000526 mmu-miR-15a 320664 Cass4 guguuugguaauacACGACGAu ||||||| ccuuccaaggucccUGCUGCUa 2 9 1180 1201 [mm9:2:172254737-172254758:+] 0.5102 140 7 -14.89 -0.2808 MIMAT0000527 mmu-miR-16 320664 Cass4 gcGGUUAUAAAUGCACGACGAu |||| : | | ||||||| uuCCAAGG--UCCCUGCUGCUa 2 21 1182 1201 [mm9:2:172254739-172254758:+] 0.5102 149 7 -16.79 -0.2881 MIMAT0000529 mmu-miR-20a 320664 Cass4 gauGGACGUGAUAUU--CGUGAAAu ||| | :||||| ||||||| aucCCUACCUUAUAAGGGCACUUUc 2 21 839 863 [mm9:2:172254396-172254420:+] 0.5000 167 7 -18.35 -0.1116 MIMAT0000529 mmu-miR-20a 320664 Cass4 gaUGGACGUGAUAUUCGUGAAAu ||:|||| ||||||||| auACUUGCA----AAGCACUUUa 2 22 179 197 [mm9:2:172253736-172253754:+] 0.5008 160 7 -22.30 -0.7890 MIMAT0000540 mmu-miR-93 320664 Cass4 gaUGGACGUGCUUGUCGUGAAAc |||| :|: || :||||||| cuACCU-UAU-AAGGGCACUUUc 2 22 843 863 [mm9:2:172254400-172254420:+] 0.5000 157 7 -18.80 -0.1105 MIMAT0000540 mmu-miR-93 320664 Cass4 gauGGACGUG--CUUGUCGUGAAAc |:| :|| | | |||||||| gucCUUAUACUUGCAAAGCACUUUa 2 21 173 197 [mm9:2:172253730-172253754:+] 0.5008 155 7 -20.40 -0.7962 MIMAT0000542 mmu-miR-34a 320664 Cass4 ugUUGGUCGAUUCUGUGACGGu | :::||| |||||||| ucAUUUGGCU--UACACUGCCa 2 21 593 612 [mm9:2:172254150-172254169:+] 0.5008 149 7 -22.10 -0.7111 MIMAT0000548 mmu-miR-322 320664 Cass4 agguuuuguacuuaACGACGAc ||||||| ccuuccaaggucccUGCUGCUa 2 9 1180 1201 [mm9:2:172254737-172254758:+] 0.5102 140 7 -15.27 -0.2832 MIMAT0000559 mmu-miR-326 320664 Cass4 ugaccuccuUCCCGGGUCUCc || ||||||| auagaacuuAGUACCCAGAGg 2 13 741 761 [mm9:2:172254298-172254318:+] 0.5008 144 7 -18.62 -0.1614 MIMAT0004642 mmu-miR-330 320664 Cass4 cggAUUCUGUGUC-CGGGUCUCu ||: || :|| ||||||| uuaUAGAACUUAGUACCCAGAGg 2 20 739 761 [mm9:2:172254296-172254318:+] 0.5008 154 7 -19.98 -0.1598 MIMAT0000649 mmu-miR-17 320664 Cass4 gaUGGACGUGACAUUCGUGAAAc ||:|||| ||||||||| auACUUGCA----AAGCACUUUa 2 22 179 197 [mm9:2:172253736-172253754:+] 0.5008 160 7 -19.80 -0.7890 MIMAT0000649 mmu-miR-17 320664 Cass4 gauGGACGUGACAUU--CGUGAAAc ||| | :| ||| ||||||| aucCCUACCUUAUAAGGGCACUUUc 2 21 839 863 [mm9:2:172254396-172254420:+] 0.5000 159 7 -17.80 -0.1116 MIMAT0000661 mmu-miR-214 320664 Cass4 ugaCGGACAGACACGGACGACa ||:|| || |||||||| augGCUUG-CUCAGCCUGCUGu 2 20 717 737 [mm9:2:172254274-172254294:+] 0.5008 161 7 -25.04 -0.1859 MIMAT0000661 mmu-miR-214 320664 Cass4 ugacggacagaCACGGACGACa || ||||||| cuccuuccaagGUCCCUGCUGc 2 12 1178 1199 [mm9:2:172254735-172254756:+] 0.5102 147 7 -18.36 -0.1373 MIMAT0000674 mmu-miR-181c 320664 Cass4 ugaGUG-GCUGUCCAACUU-ACAa ||| : || | ||||| ||| aagCACUUUACUGAUUGAACUGUc 2 20 188 211 [mm9:2:172253745-172253768:+] 0.5008 122 0 -11.57 -0.4057 MIMAT0001420 mmu-miR-433 320664 Cass4 ugUGGCUCCUCGG--GUAGUACUa |:| || || | ||||||| gaAUC-AGUAGGCAGAAUCAUGAa 2 21 1305 1327 [mm9:2:172254862-172254884:+] 0.5218 145 7 -15.62 -0.9690 MIMAT0001542 mmu-miR-449a 320664 Cass4 ugGUCGAUUGUUAUGUGACGGu || :|::| ||||||||| uuCAUUUGGC-UUACACUGCCa 2 21 592 612 [mm9:2:172254149-172254169:+] 0.5008 158 7 -23.36 -0.7185 MIMAT0003187 mmu-miR-20b 320664 Cass4 gauGGACGUGAUA--CUCGUGAAAc ||| | :||| |:||||||| aucCCUACCUUAUAAGGGCACUUUc 2 21 839 863 [mm9:2:172254396-172254420:+] 0.5000 163 7 -20.35 -0.1116 MIMAT0003187 mmu-miR-20b 320664 Cass4 gaUGGACGUGAUACUCGUGAAAc ||:|||| | |||||||| auACUUGCA--A--AGCACUUUa 2 22 179 197 [mm9:2:172253736-172253754:+] 0.5008 155 7 -19.34 -0.7890 MIMAT0003374 mmu-miR-302b 320664 Cass4 gauGAUUUUGUAC-CUUCGUGAAu || | || || |||||||| gucCUUAUACUUGCAAAGCACUUu 2 21 173 196 [mm9:2:172253730-172253753:+] 0.5008 159 7 -13.60 -0.5704 MIMAT0003377 mmu-miR-302d 320664 Cass4 uguGAGUUUGUAC-CUUCGUGAAu ||:| || || |||||||| gucCUUAUACUUGCAAAGCACUUu 2 21 173 196 [mm9:2:172253730-172253753:+] 0.5008 163 7 -14.89 -0.5704 MIMAT0003893 mmu-miR-761 320664 Cass4 acacagucaaAGUGGGACGACg ||| ||||||| cauggcuugcUCAGCCUGCUGu 2 13 716 737 [mm9:2:172254273-172254294:+] 0.5008 152 7 -19.00 -0.1895 MIMAT0003893 mmu-miR-761 320664 Cass4 acacagucaaaguGGGACGACg |||||||| cuccuuccaagguCCCUGCUGc 2 10 1178 1199 [mm9:2:172254735-172254756:+] 0.5102 145 7 -21.75 -0.1320 MIMAT0003453 mmu-miR-497 320664 Cass4 auguuuGGUGUCA--CACGACGAc ||| :|| ||||||| cuccuuCCAAGGUCCCUGCUGCUa 2 17 1178 1201 [mm9:2:172254735-172254758:+] 0.5102 147 7 -15.36 -0.2808 MIMAT0003456 mmu-miR-495 320664 Cass4 uucuucACGUGGUACAAACAAa || :|: |||||||| guuguuUGGGCUUUGUUUGUUu 2 17 274 295 [mm9:2:172253831-172253852:+] 0.5008 156 7 -12.80 -0.1695 MIMAT0003460 mmu-miR-449c 320664 Cass4 ggUCGAUCGUUACGUGACGGa | :|:|| | ||||||| ucAUUUGGC-UUACACUGCCa 2 20 593 612 [mm9:2:172254150-172254169:+] 0.5008 149 7 -19.03 -0.7111 MIMAT0003475 mmu-miR-146b 320664 Cass4 ucgGAUACCUUA-AGUC-AAGAGu || ||||:| :|| ||||| cagCU-UGGAGUCGUAGUUUCUCa 2 20 991 1013 [mm9:2:172254548-172254570:+] 0.5000 120 0 -20.72 -0.2611 MIMAT0004847 mmu-miR-882 320664 Cass4 ugauuacGCGAUUGAGAGAGGa ||| |: ||||||| ugcugacCGCCAGAUCUCUCCa 2 16 964 985 [mm9:2:172254521-172254542:+] 0.5000 155 7 -19.59 -0.2595 MIMAT0004853 mmu-miR-874 320664 Cass4 agccagggagcccgGUCCCGUc ||||||| gacaggaacucaaaCAGGGCAg 2 9 642 663 [mm9:2:172254199-172254220:+] 0.5008 140 7 -24.25 -0.2033 MIMAT0004859 mmu-miR-193b 320664 Cass4 ucgcccugaaacacCCGGUCAa ||||||| ggagguccgcucccGGCCAGUu 2 9 8 29 [mm9:2:172258151-172258172:+] 0.5330 140 7 -17.92 -0.6627 MIMAT0005447 mmu-miR-449b 320664 Cass4 cgGUCGAUUG-UUGUGACGGa || :|::| |||||||| uuCAUUUGGCUUACACUGCCa 2 19 592 612 [mm9:2:172254149-172254169:+] 0.5008 153 7 -19.66 -0.7222 MIMAT0005850 mmu-miR-1192 320664 Cass4 uuAAACCAGACAAACAAACAAa ||||| | |||||||||| ugUUUGGGC--UUUGUUUGUUu 2 21 276 295 [mm9:2:172253833-172253852:+] 0.5008 169 7 -17.63 -0.1662

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G041209 Cass4 Mus musculus 320664

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Cass4 RAID00066180 mmu-miR-1950 miRNA MIMAT0009417 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID00068672 mmu-miR-214-3p miRNA MIMAT0000661 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00119919 mmu-miR-433-3p miRNA MIMAT0001420 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00149681 mmu-miR-299a-3p miRNA MIMAT0004577 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00293381 mmu-miR-6943-5p miRNA MIMAT0027786 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00296145 mmu-miR-93-5p miRNA MIMAT0000540 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00323389 mmu-miR-134-5p miRNA MIMAT0000146 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00380903 mmu-miR-146a-5p miRNA MIMAT0000158 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00381902 mmu-miR-7024-5p miRNA MIMAT0027952 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00452429 mmu-miR-1195 miRNA MIMAT0005856 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID00587867 mmu-miR-20a-5p miRNA MIMAT0000529 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00677425 mmu-miR-291a-3p miRNA MIMAT0000368 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00713776 mmu-miR-7119-5p miRNA MIMAT0028135 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00764076 mmu-miR-34b-5p miRNA MIMAT0000382 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00786468 mmu-miR-181c-5p miRNA MIMAT0000674 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00863663 mmu-miR-16-5p miRNA MIMAT0000527 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00898463 mmu-miR-106a-5p miRNA MIMAT0000385 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID00940012 mmu-miR-15a-5p miRNA MIMAT0000526 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01056074 mmu-miR-337-3p miRNA MIMAT0000578 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID01075246 mmu-miR-3074-5p miRNA MIMAT0014856 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID01098582 mmu-miR-7009-3p miRNA MIMAT0027923 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01158107 mmu-miR-9-5p miRNA MIMAT0000142 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01206232 mmu-miR-330-5p miRNA MIMAT0004642 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01262938 mmu-miR-34a-5p miRNA MIMAT0000542 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01288974 mmu-miR-195a-5p miRNA MIMAT0000225 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01437260 mmu-miR-34c-5p miRNA MIMAT0000381 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01460940 mmu-miR-879-5p miRNA MIMAT0004842 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01539872 mmu-miR-302a-3p miRNA MIMAT0000380 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01732195 mmu-miR-322-5p miRNA MIMAT0000548 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01749374 mmu-miR-193b-3p miRNA MIMAT0004859 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01788107 mmu-miR-669k-5p miRNA MIMAT0017323 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01811698 mmu-miR-24-3p miRNA MIMAT0000219 Cass4 mRNA 320664 Prediction 0.2202 Cass4 RAID01845417 mmu-miR-295-3p miRNA MIMAT0000373 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01846712 mmu-miR-185-5p miRNA MIMAT0000214 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01850885 mmu-miR-497a-5p miRNA MIMAT0003453 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01886492 mmu-miR-7023-5p miRNA MIMAT0027950 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID01998467 mmu-miR-326-3p miRNA MIMAT0000559 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02074930 mmu-miR-3098-5p miRNA MIMAT0014917 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02092731 mmu-miR-466q miRNA MIMAT0020631 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02172170 mmu-miR-449c-5p miRNA MIMAT0003460 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02182837 mmu-miR-874-3p miRNA MIMAT0004853 Cass4 mRNA 320664 CLIP-seq//Prediction 0.6308 Cass4 RAID02257780 mmu-miR-302b-3p miRNA MIMAT0003374 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02266392 mmu-miR-466l-3p miRNA MIMAT0005830 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02282610 mmu-miR-15b-5p miRNA MIMAT0000124 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02327926 mmu-miR-153-3p miRNA MIMAT0000163 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02489366 mmu-miR-7673-5p miRNA MIMAT0029852 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02546896 mmu-miR-1192 miRNA MIMAT0005850 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02562317 mmu-miR-495-3p miRNA MIMAT0003456 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02575059 mmu-miR-3089-5p miRNA MIMAT0014899 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID02663118 mmu-miR-882 miRNA MIMAT0004847 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02720973 mmu-miR-302d-3p miRNA MIMAT0003377 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02728346 mmu-miR-20b-5p miRNA MIMAT0003187 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID02849182 mmu-miR-106b-5p miRNA MIMAT0000386 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03039821 mmu-miR-681 miRNA MIMAT0003458 Cass4 mRNA 320664 CLIP-seq 0.5483 Cass4 RAID03289199 mmu-miR-6941-5p miRNA MIMAT0027782 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03304532 mmu-miR-6964-5p miRNA MIMAT0027828 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03421227 mmu-miR-761 miRNA MIMAT0003893 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03528680 mmu-miR-449b miRNA MIMAT0005447 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03545028 mmu-miR-449a-5p miRNA MIMAT0001542 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03823987 mmu-miR-6952-5p miRNA MIMAT0027804 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03959676 mmu-miR-17-5p miRNA MIMAT0000649 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID03979700 mmu-miR-193a-3p miRNA MIMAT0000223 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID04000544 mmu-miR-294-3p miRNA MIMAT0000372 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID04007903 mmu-miR-146b-5p miRNA MIMAT0003475 Cass4 mRNA 320664 Prediction 0.1828 Cass4 RAID04062151 mmu-miR-7116-5p miRNA MIMAT0028129 Cass4 mRNA 320664 Prediction 0.1828