SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3697098 | snp | A/G | 0.495868 | 0.0452663 | intron-variant | Cass4 | Mm_Celera | 2:172420078 | GAGGTCAAACCGCCC[A/G]TCCCTGGTGAGCCCA | 320664 |
rs3697133 | snp | G/T | 0.5 | 0 | intron-variant | Cass4 | Mm_Celera | 2:172420097 | CTGGTGAGCCCAGTG[G/T]GAACCCAGGGTGGGA | 320664 |
rs3697552 | snp | A/T | 0.5 | 0 | intron-variant | Cass4 | Mm_Celera | 2:172420113 | GAACCCAGGGTGGGA[A/T]CTAACACCTTCAAGC | 320664 |
rs6187494 | snp | A/G | 0.5 | 0 | downstream-variant-500B | Cass4 | Mm_Celera | 2:172434159 | CTGGCTGTAAggact[A/G]aagaganggctccgt | 320664 |
rs6187498 | snp | C/T | 0.5 | 0 | downstream-variant-500B | Cass4 | Mm_Celera | 2:172434166 | TAAggactnaagaga[C/T]ggctccgtggttaag | 320664 |
rs6187542 | snp | C/T | 0.5 | 0 | downstream-variant-500B | Cass4 | Mm_Celera | 2:172434195 | agagcttgttactct[C/T]acagaagacctcagc | 320664 |
rs6324738 | snp | C/G | 0.473373 | 0.11227 | intron-variant | Cass4 | Mm_Celera | 2:172414129 | ATGGAAAGGGTAGTC[C/G]GAGCTGCAGGAGTGC | 320664 |
rs27614913 | snp | C/T | 0.124444 | 0.216185 | downstream-variant-500B | Cass4 | Mm_Celera | 2:172433854 | GATGTGGCATGCAGA[C/T]GACACCCACAGTTGG | 320664 |
rs27614914 | snp | A/G | 0.231111 | 0.249285 | downstream-variant-500B | Cass4 | Mm_Celera | 2:172433818 | AACCATCATTGGTGT[A/G]TTCCCGGAGTGGGTC | 320664 |
rs27614915 | snp | A/C | 0.473373 | 0.11227 | utr-variant-3-prime | Cass4 | Mm_Celera | 2:172433675 | CAAGCTGGCAGCAAT[A/C]CTTTCTCTGAAAGGG | 320664 |
rs27614916 | snp | C/T | 0.444444 | 0.157135 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172433070 | CTAGTCCACAGTAAG[C/T]TCCAAGCCAAAGACT | 320664 |
rs27614917 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172433034 | ATCTAATTGGGAAGA[C/T]AGACAAAGGGACAGG | 320664 |
rs27614918 | snp | C/G | 0.497778 | 0.0332592 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172433002 | TGTGAAACAGGCTCT[C/G]ACCTCACAGAGGCAC | 320664 |
rs27614919 | snp | C/G | 0.497778 | 0.0332592 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172432870 | TCAGCATCAACAGGG[C/G]CAGTGGCATTGTAGG | 320664 |
rs27614920 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172432839 | TTGAGATGCTGAACT[C/T]ACTGAGCCGAGGTGT | 320664 |
rs27614921 | snp | C/T | 0.124444 | 0.216185 | utr-variant-3-prime | Cass4 | GRCm38.p3 | 2:172432664 | GCGGAGGTCCGCTCC[C/T]GGCCAGTTTCACACC | 320664 |
rs27614922 | snp | A/G | 0.124444 | 0.216185 | synonymous-codon | Cass4 | GRCm38.p3 | 2:172432622 | GCACCACTCTCGGAA[A/G]TTCAGAGACACGTTG | 320664 |
rs27614923 | snp | A/G | 0.231111 | 0.249285 | synonymous-codon | Cass4 | GRCm38.p3 | 2:172432310 | GTCTAAGCATAGCAG[A/G]CTCTATTTCGGAGCA | 320664 |
rs27614924 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | GRCm38.p3 | 2:172432209 | GTTCTAGTCCTTACA[C/T]GTTTTCTCCTTCCTC | 320664 |
rs27614925 | snp | C/G | 0.132653 | 0.220748 | intron-variant | Cass4 | GRCm38.p3 | 2:172431929 | TCCTTAACAAATCTG[C/G]CTTTTCTTTCTTTCT | 320664 |
rs27614926 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172431494 | TTGCAATCTATAACA[A/C]AAGAATACATACAGA | 320664 |
rs27614927 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172431451 | TGTCTTACAGAGCTG[A/G]ATGAGTAAAATCGTA | 320664 |
rs27614928 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172431443 | GATTCTTATGTCTTA[C/T]AGAGCTGGATGAGTA | 320664 |
rs27614929 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172431422 | GTTATAGATGTGTTA[A/G]AATGTGATTCTTATG | 320664 |
rs27614930 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172431396 | GAACACTGGAAAGTC[A/G]CAAATTTATCGTTAT | 320664 |
rs27614931 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Cass4 | Mm_Celera | 2:172431385 | CCTCACCCCTAGAAC[A/G]CTGGAAAGTCGCAAA | 320664 |
rs27614932 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172430917 | CTGTTTTGTCCCACA[A/T]GAGGAATGCCTTGGC | 320664 |
rs27614933 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172430881 | TATCACTCAGCTTTG[C/T]TCCTCCTGCTGACAG | 320664 |
rs27614934 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172430862 | GCTCTGCTCTCTAAG[C/T]CCTTATCACTCAGCT | 320664 |
rs27614935 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172430844 | GAGCCCAATTCTCTC[A/G]GCGCTCTGCTCTCTA | 320664 |
rs27614936 | snp | G/T | 0.5 | 0 | intron-variant | Cass4 | Mm_Celera | 2:172430837 | TGGGCAAGAGCCCAA[G/T]TCTCTCAGCGCTCTG | 320664 |
rs27614937 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172430788 | AGATGTCCATTGACT[C/T]GGACAAGGTTATCTG | 320664 |
rs27614938 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172430102 | CTTTCATGTCTCTGA[G/T]GATGAGCACAGTAAA | 320664 |
rs27614939 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429940 | GGTTATCATGAGTAG[C/T]ACCAACATGGCATTT | 320664 |
rs27614940 | snp | C/T | 0.465374 | 0.126941 | intron-variant | Cass4 | Mm_Celera | 2:172429933 | TGTTTGGGGTTATCA[C/T]GAGTAGCACCAACAT | 320664 |
rs27614941 | snp | A/C | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172429858 | TTAGTAGTGGAAGGA[A/C]ACCTGGACACCCAGG | 320664 |
rs27614942 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429825 | ATGTTCAAGGCCTCC[A/G]TCTGTCTTTTGCTTT | 320664 |
rs27614943 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429815 | AGCCTACTCCATGTT[C/T]AAGGCCTCCATCTGT | 320664 |
rs27614944 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429782 | GAGCTCTCCTTGGCT[A/G]TGAAAATTCAGTGTT | 320664 |
rs27614945 | snp | G/T | 0.489796 | 0.070696 | intron-variant | Cass4 | Mm_Celera | 2:172429749 | TCCCCAGTGCTCTGA[G/T]TGTGATTCTGCCCTA | 320664 |
rs27614946 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429722 | CTTCCATGGCATGGT[A/G]AGTCGGAGTGCTCCC | 320664 |
rs27614947 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429333 | CCTGGCAGGCAGGAC[A/G]CAGCCCTTGGCCACC | 320664 |
rs27614948 | snp | A/C | 0.260355 | 0.249785 | intron-variant | Cass4 | Mm_Celera | 2:172429219 | ACTGCTGAGGCCCAG[A/C]AAGTGACCATCCCAG | 320664 |
rs27614949 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429145 | CACCCCGAGAAACAT[G/T]GCTCTGGCTGGCTGC | 320664 |
rs27614950 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172429136 | AGCTCCAGGCACCCC[A/G]AGAAACATTGCTCTG | 320664 |
rs27614951 | snp | C/T | 0.432133 | 0.171253 | intron-variant | Cass4 | Mm_Celera | 2:172428320 | GTCTCTGCCTTTCTC[C/T]GTCTCTTATGGTTGT | 320664 |
rs27614952 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Cass4 | Mm_Celera | 2:172428277 | AACTGTCTCCTGGCT[C/T]TTTTTGAGTGTGTGG | 320664 |
rs27614953 | snp | A/G | 0.152778 | 0.230321 | missense | Cass4 | Mm_Celera | 2:172427897 | CCTTTGAACTAGCAA[A/G]GAAAAACAGAGTGAA | 320664 |
rs27614954 | snp | A/G | 0.231111 | 0.249285 | synonymous-codon | Cass4 | Mm_Celera | 2:172427862 | CAGCCCCTTCGACAG[A/G]CAACCGACAACTGAA | 320664 |
rs27614955 | snp | A/C | 0.231111 | 0.249285 | synonymous-codon | Cass4 | Mm_Celera | 2:172427800 | GACTTGAAGTGTGAG[A/C]GATGCATCCGGCCTC | 320664 |
rs27614956 | snp | A/G | 0.231111 | 0.249285 | missense | Cass4 | Mm_Celera | 2:172427765 | TCCTTTTTAAACAGA[A/G]CTGTGAGAAAGGAGA | 320664 |
rs27614957 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Cass4 | Mm_Celera | 2:172427709 | AATAGTTCCAGAAGA[C/T]GTCAAGAGGTTTACC | 320664 |
rs27614958 | snp | A/G | 0.124444 | 0.216185 | missense | Cass4 | Mm_Celera | 2:172427600 | TGGATGCCAAGGGAA[A/G]CTTGGACCGCTGCAA | 320664 |
rs27614959 | snp | A/T | 0.124444 | 0.216185 | missense | Cass4 | Mm_Celera | 2:172427386 | CTCTTTGTAAGCAGG[A/T]CTTGGAGGTTCAAAG | 320664 |
rs27614960 | snp | A/T | 0.152778 | 0.230321 | missense | Cass4 | Mm_Celera | 2:172427329 | AAGGAGACAGCAGTG[A/T]CTCTGCAACACAAAG | 320664 |
rs27614961 | snp | C/T | 0.124444 | 0.216185 | synonymous-codon | Cass4 | Mm_Celera | 2:172427025 | CATGCCTAACATTTA[C/T]GACACCCCTAAAGCC | 320664 |
rs27614962 | snp | C/T | 0.231111 | 0.249285 | missense | Cass4 | Mm_Celera | 2:172426871 | CACAGCTGGGGAACA[C/T]TGTGCAGAGAAAAAA | 320664 |
rs27614963 | snp | A/G | 0.124444 | 0.216185 | synonymous-codon | Cass4 | Mm_Celera | 2:172426695 | TGGTGGCTATAACCC[A/G]TTATCCAGCCCTCAG | 320664 |
rs27614964 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172426633 | TGTGTTTTTTTCCTC[C/T]AGGGACGGGATGTTA | 320664 |
rs27614965 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172426576 | CAAGGGTCTGTCGGA[C/T]TCTCGTTTGGTTGTT | 320664 |
rs27614966 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172426477 | GAGGATGAAGCCAGA[C/T]TGGGAGAGCCCTTGA | 320664 |
rs27614967 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172426004 | CCCAGTAGCAGGATC[A/G]GGACAAGTAGAGGCA | 320664 |
rs27614968 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172425916 | TAGGGGGAATCGTCC[A/G]ACTTTGATGCGTTTC | 320664 |
rs27614969 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172425853 | TGCATTTTTACTACA[G/T]ATGTTCAGGACTATT | 320664 |
rs27614970 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172425829 | TATGTCATTTAACTT[C/T]CCCATGCCTGCATTT | 320664 |
rs27614971 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172424899 | CAGAGAGAGAGCACA[A/G]GATGGAAGAAGATGC | 320664 |
rs27614972 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172424868 | TTTGGAAACTGTGGT[C/G]CGGGGTGGTACATCT | 320664 |
rs27614973 | snp | G/T | 0.231111 | 0.249285 | missense | Cass4 | Mm_Celera | 2:172424655 | CCCAGAAGGCTCTGC[G/T]CCACTCCTCCACCAG | 320664 |
rs27614974 | snp | A/C | 0.124444 | 0.216185 | missense | Cass4 | Mm_Celera | 2:172424609 | CCCTAGAGGCTGGAG[A/C]AGCAGCAGTTCTATG | 320664 |
rs27614975 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Cass4 | Mm_Celera | 2:172424583 | TAAAGTTGTCCTACT[A/G]TGTGGTCTTTCCCTA | 320664 |
rs27614976 | snp | G/T | 0.401235 | 0.199068 | intron-variant | Cass4 | Mm_Celera | 2:172424575 | AGAGAAGTTAAAGTT[G/T]TCCTACTGTGTGGTC | 320664 |
rs27614977 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172423849 | GGTGACGGCTGGGAT[A/G]AATCTGTGCTTGTAC | 320664 |
rs27614978 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172423822 | CTCAAGATAACTGCC[A/G]GTGTTTGTTTGGGTG | 320664 |
rs27614979 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Cass4 | Mm_Celera | 2:172423755 | TGGTGCCATCTCTGG[A/G]TTCTCCACGCTGTTT | 320664 |
rs27614980 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172423547 | GTGCAGACAAACGCT[C/T]GGTGGCCATCTTTGC | 320664 |
rs27614981 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172423518 | GACAGCCTCAAGGGC[A/G]GACCCACCCGCTAGT | 320664 |
rs27614982 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172423257 | AAGCCACTTCTCAGT[C/T]GAATCTGATGGAGAC | 320664 |
rs27614983 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172423244 | AAATGCATATTCTAA[A/G]CCACTTCTCAGTTGA | 320664 |
rs27614984 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172423220 | AGATTCACCAGGCAT[A/G]CGCACCAGAAATGCA | 320664 |
rs27614985 | snp | G/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172422842 | CCTGTGGCCTTGGTA[G/T]GACGAGTCCTATTTC | 320664 |
rs27614986 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422591 | TTCACCAAGTCATCC[C/G]GAGGCTGGGTCCTAG | 320664 |
rs27614987 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422567 | ACAGTCCTGGGCTAT[G/T]TGCCTTCATTCACCA | 320664 |
rs27614988 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172422473 | TGCCTGGACAGACGC[A/G]TATATATGGCCTCAC | 320664 |
rs27614989 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422377 | TTAGAAAGTCCAGCT[C/T]GTGGGAACCTTGCCC | 320664 |
rs27614990 | snp | G/T | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422320 | ATGCGTGTTACTCGG[G/T]TTTCCAGGTGAGAGT | 320664 |
rs27614991 | snp | A/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422252 | AAGTGGAGATGGGCG[A/G]AACGTGAGGCTAGAC | 320664 |
rs27614992 | snp | C/T | 0.132653 | 0.220748 | intron-variant | Cass4 | Mm_Celera | 2:172422246 | ACCATGAAGTGGAGA[C/T]GGGCGGAACGTGAGG | 320664 |
rs27614993 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Cass4 | Mm_Celera | 2:172422154 | TATCGCACAAGCAGT[C/T]GCGAATGTGTAATTT | 320664 |
rs27614994 | snp | C/G | 0.124444 | 0.216185 | intron-variant | Cass4 | Mm_Celera | 2:172422146 | TCTGGGAGTATCGCA[C/G]AAGCAGTTGCGAATG | 320664 |
rs27614995 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172422139 | CCCGGGTTCTGGGAG[C/T]ATCGCACAAGCAGTT | 320664 |
rs27614996 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172421147 | CCATAGACATGTAGA[A/G]GTCAGAGGTCAACAT | 320664 |
rs27614997 | snp | A/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172421126 | TGTGTGTAAATGAGA[A/T]TGTGCCCATAGACAT | 320664 |
rs27614998 | snp | C/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172421011 | CAACATGTAATCTAA[C/G]CAACCATTGATGAGT | 320664 |
rs27614999 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420939 | GCTCTGAGCAAGGAA[A/G]AGCTTGGGAAAGGTC | 320664 |
rs27615000 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420837 | AAACATGGGACAGTT[C/T]TGAAGTGGCACACAC | 320664 |
rs27615001 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420796 | CTGTTCCTTAAATGC[C/T]ATCTGGAACTTAACA | 320664 |
rs27615002 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420770 | GCCTCTGGAAACCAC[A/G]GCACTCAGGCCTGTT | 320664 |
rs27615003 | snp | A/G | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420615 | AGCTTCCTGTATTCA[A/G]TGTGGAAACCCCGCT | 320664 |
rs27615004 | snp | C/T | 0.231111 | 0.249285 | intron-variant | Cass4 | Mm_Celera | 2:172420567 | TCCTCCTGTAGCTTC[C/T]GCTCTTCTGTGTTTT | 320664 |
rs27615005 | snp | C/T | 0.277778 | 0.248452 | intron-variant | Cass4 | Mm_Celera | 2:172420534 | AAATCAAAACCAGCT[C/T]CCAGAAGCTCCGCGC | 320664 |