DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000568 rno-miR-330* 60331 Atxn3 agaGACGUCCGGGACACGAAACg :||| || :| ||||||| gucUUGCUGGGUCAAUGCUUUGg 2 21 1117 1139 [rn4:6:126196797-126196819:-] 0.5460 160 7 -21.54 -0.2342 MIMAT0000568 rno-miR-330* 60331 Atxn3 agAGACGUCCGGGACACGAAACg |:||| | | ||||||| auUUUGC---CACCAUGCUUUGu 2 22 15 34 [rn4:6:126197902-126197921:-] 0.6022 145 7 -17.24 -0.6620 MIMAT0000574 rno-miR-140* 60331 Atxn3 ggcaccaagAUGGGACACCAu ||: ||||||| auauuuaaaUAUACUGUGGUu 2 13 979 999 [rn4:6:126196937-126196957:-] 0.5460 148 7 -15.73 -0.8420 MIMAT0000577 rno-miR-337 60331 Atxn3 uuuccguAGUAUAUCCUCGACUu |: || | ||||||| ccuguucUUCUAAACGAGCUGAg 2 17 597 619 [rn4:6:126197317-126197339:-] 0.5460 152 7 -11.74 -0.1466 MIMAT0004645 rno-miR-148b-5p 60331 Atxn3 ggacucacauauUGUCUUGAAg ||||||||| uuagcucuugccACAGAACUUg 2 11 290 311 [rn4:6:126197625-126197646:-] 0.5460 150 7 -11.79 -0.1420 MIMAT0000604 rno-miR-350 60331 Atxn3 cacUUUCACAUACCCGAAACACUu :|: || | | :||||||| aacGAGCUG-AGGUUUUUUGUGAg 2 22 609 631 [rn4:6:126197305-126197327:-] 0.5460 147 7 -12.23 -0.1347 MIMAT0000604 rno-miR-350 60331 Atxn3 cacuuucacauacccGAAACACUu :||||||| cauuucacaccaaccUUUUGUGAa 2 10 374 397 [rn4:6:126197539-126197562:-] 0.5460 141 7 -9.01 -0.8323 MIMAT0004714 rno-miR-26b* 60331 Atxn3 cuCGGUUCAUUACCUCU-UGUCc |:::|| || ||||| |||| caGUUGAG-AAAGGAGAGACAGa 2 21 700 721 [rn4:6:126197215-126197236:-] 0.5460 130 0 -16.77 -0.4059 MIMAT0004720 rno-miR-30e* 60331 Atxn3 cgACAU-UUGUAGGCUGACUUUc |||: ||:|||:|||||||| aaUGUGCAAUAUCUGACUGAAAu 2 21 232 254 [rn4:6:126197682-126197704:-] 0.5460 179 7 -23.38 -0.4938 MIMAT0004720 rno-miR-30e* 60331 Atxn3 cgACAUUUGUAGGCUGACUUUc | | : :|||: ||||||| uuUAUUGCUAUCUAACUGAAAa 2 21 1367 1388 [rn4:6:126196548-126196569:-] 0.5460 156 7 -13.03 -1.1089 MIMAT0004722 rno-miR-30d* 60331 Atxn3 cguCGUUUGUAGACUGACUUUc || ||:|||||||||||| uguGC-AAUAUCUGACUGAAAu 2 20 234 254 [rn4:6:126197682-126197702:-] 0.5460 177 7 -22.60 -0.4938 MIMAT0004722 rno-miR-30d* 60331 Atxn3 cgucguuuGUAGACUGACUUUc :|||| ||||||| uuuauugcUAUCUAACUGAAAa 2 15 1367 1388 [rn4:6:126196548-126196569:-] 0.5460 158 7 -11.69 -1.1089 MIMAT0000809 rno-miR-30a* 60331 Atxn3 cgACGUUUGUAGGCUGACUUUc ||| ||:|||:|||||||| ugUGC-AAUAUCUGACUGAAAu 2 21 234 254 [rn4:6:126197682-126197702:-] 0.5460 178 7 -23.87 -0.4938 MIMAT0000809 rno-miR-30a* 60331 Atxn3 cgacguuuGUAGGCUGACUUUc :|||: ||||||| uuuauugcUAUCUAACUGAAAa 2 15 1367 1388 [rn4:6:126196548-126196569:-] 0.5460 154 7 -15.54 -1.1089 MIMAT0004726 rno-miR-101a* 60331 Atxn3 cguAGUCGUGACACUAUUGACu |:| ::|| | |||||| gauUUAUUGCUAU-CUAACUGa 2 20 1365 1385 [rn4:6:126196551-126196571:-] 0.5460 121 6 -9.96 -0.1578 MIMAT0004732 rno-miR-135a* 60331 Atxn3 aaaguACCGAA-GGUAGGGAUGu || :|| || ||||||| gauacUGUUUUCCCCUCCCUACc 2 18 1194 1216 [rn4:6:126196720-126196742:-] 0.5460 156 7 -18.28 -0.1647 MIMAT0000893 rno-miR-290 60331 Atxn3 uuUUUCACGGGGGUAUC-AAACUc ||||| || ||| ||||| cgAAAGU----CCUUAGUUUUGAu 2 22 1072 1091 [rn4:6:126196845-126196864:-] 0.5460 120 0 -11.35 -0.7079 MIMAT0003116 rno-miR-501 60331 Atxn3 aaAGUGGGUCCCUGUUUCCUAa ||| | | :||||||| agUCA-CAAUACUUAAAGGAUc 2 21 1039 1059 [rn4:6:126196877-126196897:-] 0.5460 142 7 -13.49 -0.6083 MIMAT0003124 rno-miR-412 60331 Atxn3 ugCCGAUCACCUGGUCCACUUCa | :|||| | |||||||| caGCUUAGU--A--AGGUGAAGc 2 22 1281 1299 [rn4:6:126196637-126196655:-] 0.5460 147 7 -17.33 -0.4037 MIMAT0003162 rno-miR-1* 60331 Atxn3 cccauguauuucuuCAUACACg ||||||| gucugucuuuucguGUAUGUGu 2 9 431 452 [rn4:6:126197484-126197505:-] 0.5460 140 7 -9.03 -0.3308 MIMAT0003175 rno-miR-543* 60331 Atxn3 ucUUCACGUGGCGCUUACAAa ||| | |: :||||||| ugAAG-CCCCUUUGAAUGUUa 2 20 1222 1241 [rn4:6:126196695-126196714:-] 0.5460 149 7 -12.79 -0.8787 MIMAT0003198 rno-miR-376a 60331 Atxn3 ugcACC-UAAAAGGAGAUG-CUa ||| || || |||||| || gcaUGGUAUAUUGCUCUACUGAu 2 19 1298 1320 [rn4:6:126196616-126196638:-] 0.5460 129 0 -16.38 -0.1635 MIMAT0003382 rno-miR-664 60331 Atxn3 auccgaccccucauUUACUUau |||||| gaaaguaauuuacuAAUGAAaa 3 9 956 977 [rn4:6:126196959-126196980:-] 0.5460 120 0 -3.39 -0.1272 MIMAT0005280 rno-miR-743b 60331 Atxn3 agauaAGUCAUACCACAGAAAg ||||| ||||||| aaagaUCAGU---CUGUCUUUu 2 18 423 441 [rn4:6:126197495-126197513:-] 0.5460 145 7 -12.76 -0.1989 MIMAT0005285 rno-miR-877 60331 Atxn3 ggGACGCGGUAGAGGAGAUg ||| ||| ||||||| cuCUGGUGCAU-UCCUCUAc 2 19 566 584 [rn4:6:126197352-126197370:-] 0.5460 152 7 -24.33 -0.4203 MIMAT0005297 rno-miR-147 60331 Atxn3 aucgucuucGU-AAAGGCGUGUg || |||||||||| accacauuaCACUUUCCGCACAc 2 14 1807 1829 [rn4:6:126196107-126196129:-] 0.5301 156 7 -21.45 -0.5665 MIMAT0005321 rno-miR-500 60331 Atxn3 acuugGGAACGGGUCCACGUAa ::| |:| ||||||| cauuaUUUAACUCUGGUGCAUu 2 18 556 577 [rn4:6:126197359-126197380:-] 0.5460 149 7 -17.02 -0.4252 MIMAT0005321 rno-miR-500 60331 Atxn3 acuuggGAAC-GGGUCCAC-GUAa :||| ||::|||| ||| ugugugUUUGUCCUGGGUGUCAUa 2 17 1164 1187 [rn4:6:126196749-126196772:-] 0.5460 123 0 -19.23 -0.2375 MIMAT0012823 rno-miR-490 60331 Atxn3 gucgUACCUCAG-GAGGUC-CAAc :|||: || :||||| ||| ggugGUGGGUUCGUUCCAGUGUUu 2 19 794 817 [rn4:6:126197119-126197142:-] 0.5460 125 0 -18.00 -0.1684 MIMAT0012836 rno-miR-628 60331 Atxn3 ggAGAGCAUUUAUACAGU-CGUa |:||||: ||:||||| ||| cuUUUCGUGUAUGUGUCAGGCAc 2 21 437 459 [rn4:6:126197477-126197499:-] 0.5460 144 0 -25.07 -0.1553 MIMAT0012836 rno-miR-628 60331 Atxn3 ggagagcauuuauaCAGUCGUa ||||||| uagccaaagaggcaGUCAGCAa 2 9 165 186 [rn4:6:126197750-126197771:-] 0.6022 140 7 -13.72 -0.7114 MIMAT0012836 rno-miR-628 60331 Atxn3 ggaGAGCAUUUAUACAG-UCGUa || || | ||||| |||| gugCUGGU-CACAUGUCGAGCAu 2 20 1759 1780 [rn4:6:126196156-126196177:-] 0.5301 121 0 -14.82 -0.1061 MIMAT0012844 rno-miR-665 60331 Atxn3 ucccuggagucggAGGACCa |||||| guauaugauuaagUCCUGGa 2 8 844 863 [rn4:6:126197073-126197092:-] 0.5460 120 6 -11.45 -0.1002 MIMAT0012845 rno-miR-935 60331 Atxn3 cgccaucgccuucgccAUUGACc |||||| aggauuuauugcuaucUAACUGa 2 8 1363 1385 [rn4:6:126196551-126196573:-] 0.5460 120 6 -7.14 -0.1716 MIMAT0012850 rno-miR-465 60331 Atxn3 gugUGGU-CGUGGCAAGAUUUAu || | |:| : |||||||| gaaACAACGUAGUUUUCUAAAUg 2 20 192 214 [rn4:6:126197722-126197744:-] 0.6022 154 7 -12.93 -0.6006 MIMAT0012853 rno-miR-761 60331 Atxn3 acACAGUCAAAGUGGGA-CGACg | |||| | :::||| |||| gaUUUCAGCUGUGUCCUGGCUGa 2 21 659 681 [rn4:6:126197255-126197277:-] 0.5460 128 0 -17.79 -0.2848 MIMAT0012854 rno-miR-764 60331 Atxn3 ucCUCC--UGUACACUCGUGg |||| : ||||||||| cuGAGGUUUUUUGUGAGCACg 2 18 615 635 [rn4:6:126197301-126197321:-] 0.5460 152 7 -21.48 -0.2161 MIMAT0000562 rno-let-7d 60331 Atxn3 uuGAUACGUU-G-GAUGAUGGAGa ||| |:|| | || ||||||| ugCUAGGUAAGCGCU-CUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 156 7 -21.38 -0.1088 MIMAT0000575 rno-miR-335 60331 Atxn3 uguaaaaAGCAAUAACGAGAACu |||||| ||||||| gaccaacUCGUUA--GCUCUUGc 2 17 280 300 [rn4:6:126197636-126197656:-] 0.5460 157 7 -15.96 -0.2564 MIMAT0000579 rno-miR-148b-3p 60331 Atxn3 ugUUUCAAGAC--ACUACGU-GACu ||:|||| | | ||||| ||| caAAGGUUCAGAAUUAUGCAGCUGu 2 21 1669 1693 [rn4:6:126196243-126196267:-] 0.5301 131 0 -14.82 -0.2947 MIMAT0000774 rno-let-7a 60331 Atxn3 uuGAUAUGUU-G-GAUGAUGGAGu ||| ::|| | || ||||||| ugCUAGGUAAGCGCU-CUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 152 7 -18.21 -0.1110 MIMAT0000775 rno-let-7b 60331 Atxn3 uuGGUGUGUU-G-GAUGAUGGAGu |:| ::|| | || ||||||| ugCUAGGUAAGCGCU-CUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 148 7 -18.71 -0.1110 MIMAT0000776 rno-let-7c 60331 Atxn3 uuGGUAUGUU-G-GAUGAUGGAGu |:| ::|| | || ||||||| ugCUAGGUAAGCGCU-CUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 148 7 -17.52 -0.1110 MIMAT0000777 rno-let-7e 60331 Atxn3 uuGAUAUGUUGGAG-GAUGGAGu ||| ::|| | | ||||||| ugCUAGGUAAGCGCUCUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 159 7 -18.51 -0.1199 MIMAT0000778 rno-let-7f 60331 Atxn3 uuGAUAUGUUAG-AUGAUGGAGu ||| ::|| | ||||||| ugCUAGGUAAGCGCUCUACCUCu 2 21 1491 1513 [rn4:6:126196423-126196445:-] 0.4809 151 7 -17.15 -0.1199 MIMAT0000779 rno-let-7i 60331 Atxn3 uugUCGUGUUUGAUGAUGGAGu :|:| : :|| ||||||| cuaGGUAAGCGCU-CUACCUCu 2 20 1493 1513 [rn4:6:126196423-126196443:-] 0.4809 149 7 -17.89 -0.1110 MIMAT0000785 rno-miR-16 60331 Atxn3 gcGGUUAUAAAUGCAC-GACGAu |::: | || ||| ||||| ucCUGGAAAAUAGGUGCCUGCUu 2 21 857 879 [rn4:6:126197057-126197079:-] 0.5460 120 0 -13.10 -0.6250 MIMAT0000795 rno-miR-25 60331 Atxn3 agucuggcucUGUUCACGUUAc | | ||||||| cuuguuuuucAAAUGUGCAAUa 2 13 221 242 [rn4:6:126197694-126197715:-] 0.5460 144 7 -8.05 -1.1058 MIMAT0000810 rno-miR-31 60331 Atxn3 gucgauaCGGUCGUAGAACGGa |::||| ||||||| ccaacucGUUAGC-UCUUGCCa 2 16 282 302 [rn4:6:126197634-126197654:-] 0.5460 153 7 -19.16 -0.3821 MIMAT0000811 rno-miR-32 60331 Atxn3 acguuGAAUCAUUACACGUUAu :|| |||||||||| cuuguUUUUCAAAUGUGCAAUa 2 18 221 242 [rn4:6:126197694-126197715:-] 0.5460 157 7 -14.09 -1.1012 MIMAT0000816 rno-miR-92a 60331 Atxn3 guccggcccUGUUCACGUUAu | | ||||||| uuguuuuucAAAUGUGCAAUa 2 13 222 242 [rn4:6:126197694-126197714:-] 0.5460 144 7 -10.07 -1.1104 MIMAT0000818 rno-miR-96 60331 Atxn3 ucguuuuuacacGAUCACGGUUu :| ||||||| uuucuuagccauUUUGUGCCAAu 2 12 1563 1585 [rn4:6:126196351-126196373:-] 0.5301 143 7 -12.01 -0.9376 MIMAT0000819 rno-miR-98 60331 Atxn3 uugUUAUGUUGAAUGAUGGAGu ::|| |:| ||||||| cuaGGUA-AGCGCUCUACCUCu 2 20 1493 1513 [rn4:6:126196423-126196443:-] 0.4809 145 7 -15.15 -0.1199 MIMAT0000839 rno-miR-133a 60331 Atxn3 gucGACCAACUUCCCCUGGUUu :||| | ||||||| uccUUGGCUCUUUUGGACCAAc 2 20 265 286 [rn4:6:126197650-126197671:-] 0.5460 143 7 -13.79 -0.2460 MIMAT0000846 rno-miR-141 60331 Atxn3 gguagaaauggucuGUCACAAu ||||||| ugguggguucguucCAGUGUUu 2 9 796 817 [rn4:6:126197119-126197140:-] 0.5460 140 7 -10.11 -0.1614 MIMAT0000850 rno-miR-144 60331 Atxn3 ucAUGU-AGUAGAUAUGACAu ||:| |:| |||||||| aaUAUAUUUAAAUAUACUGUg 2 19 976 996 [rn4:6:126196940-126196960:-] 0.5460 157 7 -14.52 -0.6559 MIMAT0000850 rno-miR-144 60331 Atxn3 ucAUGUAGUAGAUAUGACAu || ||| | ||||||| caUAGAUCCU-GAUACUGUu 2 19 1184 1202 [rn4:6:126196734-126196752:-] 0.5460 152 7 -11.07 -0.1809 MIMAT0000852 rno-miR-146a 60331 Atxn3 uuGGGUAC-CUUAA-GUC-AAGAGu ::::|| |||| ||| ||||| auUUUGUGCCAAUUACAGUUUCUCu 2 21 1573 1597 [rn4:6:126196339-126196363:-] 0.5301 122 0 -11.54 -0.8513 MIMAT0000854 rno-miR-152 60331 Atxn3 ggUUCAAGAC--AGUACGU-GACu |:|||| | |:||||| ||| aaAGGUUCAGAAUUAUGCAGCUGu 2 20 1670 1693 [rn4:6:126196243-126196266:-] 0.5301 130 0 -16.55 -0.2947 MIMAT0000857 rno-miR-181c 60331 Atxn3 ugaguggcuguccAACUUACAa |||||||| uuuugaagccccuUUGAAUGUu 2 10 1219 1240 [rn4:6:126196696-126196717:-] 0.5460 145 7 -9.93 -0.5600 MIMAT0000857 rno-miR-181c 60331 Atxn3 ugaguggcuguccaACUUACAa ||||||| cuuaacguucuccaUGAAUGUa 2 9 745 766 [rn4:6:126197170-126197191:-] 0.5460 140 7 -10.80 -0.1983 MIMAT0000858 rno-miR-181a 60331 Atxn3 ugAGUGGCUGUCGCAACUUACAa |:| || : | ||||||| acUUAACGUUCUCCAUGAAUGUa 2 22 744 766 [rn4:6:126197170-126197192:-] 0.5460 149 7 -12.73 -0.2002 MIMAT0000858 rno-miR-181a 60331 Atxn3 ugAGUGGCU--GUCGCAACUUACAa |: ::|| | | |||||||| ccUUUUUGAAGCCCCUUUGAAUGUu 2 22 1216 1240 [rn4:6:126196696-126196720:-] 0.5460 148 7 -15.88 -0.5600 MIMAT0000859 rno-miR-181b 60331 Atxn3 ugGGUGGCUGUCGUUACUUACAa ::| || : | |||||||| acUUAACGUUCUCCAUGAAUGUa 2 22 744 766 [rn4:6:126197170-126197192:-] 0.5460 153 7 -14.08 -0.2002 MIMAT0000859 rno-miR-181b 60331 Atxn3 uggguggcugucguuACUUACAa ||||||| uuuuugaagccccuuUGAAUGUu 2 9 1218 1240 [rn4:6:126196696-126196718:-] 0.5460 140 7 -12.13 -0.5600 MIMAT0000874 rno-miR-200a 60331 Atxn3 uguagcaauggucuGUCACAAu ||||||| ugguggguucguucCAGUGUUu 2 9 796 817 [rn4:6:126197119-126197140:-] 0.5460 140 7 -13.03 -0.1598 MIMAT0000876 rno-miR-203 60331 Atxn3 gauCACCA-GGAUU-U--GUAAAGUg ||| | |||:| | ||||||| gauGUGCUGCCUGACAGCCAUUUCAg 2 20 1837 1862 [rn4:6:126196074-126196099:-] 0.5318 152 7 -14.48 -0.1709 MIMAT0000876 rno-miR-203 60331 Atxn3 gauCACCAGGAUUUGUAAAGUg | | |::| ||||||| uuuGGGCUUUUCUUCAUUUCAc 2 20 360 381 [rn4:6:126197555-126197576:-] 0.5460 147 7 -14.99 -0.4529 MIMAT0000883 rno-miR-212 60331 Atxn3 acCGGCACUG-ACCUCU-GACAAu |:| | || ||| || ||||| aaGUC-UAACAUGGUGAUCUGUUg 2 21 508 530 [rn4:6:126197406-126197428:-] 0.5460 121 0 -15.45 -0.4083 MIMAT0000885 rno-miR-214 60331 Atxn3 gacggacaGACAC-GGA-CGACa ||||| ||| |||| gauuucagCUGUGUCCUGGCUGa 2 14 659 681 [rn4:6:126197255-126197277:-] 0.5460 120 0 -18.52 -0.2823 MIMAT0003119 rno-miR-224 60331 Atxn3 auUUGCCUUGGUGAUC-ACUGAAc |:| | ::| ||:| |||||| ucAGCUGUGUC-CUGGCUGACUUa 2 22 663 685 [rn4:6:126197251-126197273:-] 0.5460 123 6 -12.81 -0.3558 MIMAT0003123 rno-miR-377 60331 Atxn3 gguUUUCAACGGAAACACACUa || ||| ||||||||| uguAACAUUG--UUUGUGUGAu 2 20 32 51 [rn4:6:126197885-126197904:-] 0.6022 156 7 -12.88 -0.4519 MIMAT0003126 rno-miR-133b 60331 Atxn3 aucGACCAACUUCCCCUGGUUu :||| | ||||||| uccUUGGCUCUUUUGGACCAAc 2 20 265 286 [rn4:6:126197650-126197671:-] 0.5460 143 7 -13.79 -0.2460 MIMAT0003196 rno-miR-376b-3p 60331 Atxn3 uucaccUACAAG--GAGAUACUa || ||| ||||||| aguccuAUUUUCAAAUCUAUGAa 2 16 1628 1650 [rn4:6:126196286-126196308:-] 0.5301 146 7 -10.05 -1.0545 MIMAT0003196 rno-miR-376b-3p 60331 Atxn3 uucACC-UACAAGGAGAU-ACUa ||| || || ||||| ||| gcaUGGUAUAUUGCUCUACUGAu 2 19 1298 1320 [rn4:6:126196616-126196638:-] 0.5460 129 0 -14.06 -0.1635 MIMAT0003210 rno-miR-363 60331 Atxn3 augucuaccuaUGGCACGUUAa | :||||||| cuuguuuuucaAAUGUGCAAUa 2 12 221 242 [rn4:6:126197694-126197715:-] 0.5460 143 7 -9.71 -1.1035 MIMAT0005299 rno-miR-181d 60331 Atxn3 ugGGUGGCUGUUGUUACUUACAa ::| || : | |||||||| acUUAACGUUCUCCAUGAAUGUa 2 22 744 766 [rn4:6:126197170-126197192:-] 0.5460 153 7 -14.28 -0.2002 MIMAT0005299 rno-miR-181d 60331 Atxn3 uggguggcuguuguuACUUACAa ||||||| uuuuugaagccccuuUGAAUGUu 2 9 1218 1240 [rn4:6:126196696-126196718:-] 0.5460 140 7 -12.07 -0.5600 MIMAT0005314 rno-miR-425 60331 Atxn3 aguugcccucacuagCACAGUAa ||||||| guguguuuguccuggGUGUCAUa 2 9 1165 1187 [rn4:6:126196749-126196771:-] 0.5460 140 7 -9.49 -0.2184 MIMAT0005316 rno-miR-455 60331 Atxn3 gcUACAUCAGGUUUCCGUGUAu |||| ||| |||||||| guAUGU-GUC---AGGCACAUg 2 21 445 462 [rn4:6:126197474-126197491:-] 0.5460 154 7 -19.42 -0.1446 MIMAT0005320 rno-miR-495 60331 Atxn3 uucuucacgugguACAAACAAa |||||||| uguguuucucuuuUGUUUGUUu 2 10 1539 1560 [rn4:6:126196376-126196397:-] 0.5055 145 7 -12.65 -0.9300 MIMAT0005335 rno-miR-758 60331 Atxn3 ccaaucaccuggUCCAGUGUUu | ||||||| uaagaauuacagAAGUCACAAu 2 11 1026 1047 [rn4:6:126196889-126196910:-] 0.5460 142 7 -11.92 -0.9413 MIMAT0005340 rno-miR-92b 60331 Atxn3 ccuccggcccugcuCACGUUAu ||||||| cuuguuuuucaaauGUGCAAUa 2 9 221 242 [rn4:6:126197694-126197715:-] 0.5460 140 7 -9.33 -1.1104 MIMAT0005341 rno-miR-488 60331 Atxn3 cugguucuUUGUCGG-AAAGUu :|||||| ||||| ugcugccuGACAGCCAUUUCAg 2 14 1841 1862 [rn4:6:126196074-126196095:-] 0.5318 125 0 -19.05 -0.3821 MIMAT0005595 rno-miR-146b 60331 Atxn3 ugUCGGAUAC-CUUAA-GUC-AAGAGu | ::|:|| |||| ||| ||||| ccAUUUUGUGCCAAUUACAGUUUCUCu 2 23 1571 1597 [rn4:6:126196339-126196365:-] 0.5301 128 0 -15.54 -0.8513

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G098855 Atxn3 Rattus norvegicus 60331

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Atxn3 RAID00034455 rno-miR-33-3p miRNA MIMAT0017104 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID00088574 rno-miR-152-3p miRNA MIMAT0000854 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID00088891 rno-miR-32-5p miRNA MIMAT0000811 Atxn3 mRNA 60331 Prediction 0.2381 Atxn3 RAID00139996 rno-miR-92a-3p miRNA MIMAT0000816 Atxn3 mRNA 60331 Prediction 0.2381 Atxn3 RAID00154730 rno-miR-200a-3p miRNA MIMAT0000874 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID00243490 rno-miR-500-3p miRNA MIMAT0005321 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID00736492 rno-miR-335 miRNA MIMAT0000575 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID00913984 rno-miR-30a-3p miRNA MIMAT0000809 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01054046 rno-miR-501-3p miRNA MIMAT0017198 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01119306 rno-miR-376b-3p miRNA MIMAT0003196 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01180981 rno-miR-25-3p miRNA MIMAT0000795 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID01304653 rno-miR-1912-3p miRNA MIMAT0017865 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01330715 rno-miR-133b-3p miRNA MIMAT0003126 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01372593 rno-miR-133a-3p miRNA MIMAT0000839 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01387418 rno-let-7i-5p miRNA MIMAT0000779 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01412557 rno-miR-146a-5p miRNA MIMAT0000852 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01510635 rno-miR-224-5p miRNA MIMAT0003119 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01511153 rno-miR-350 miRNA MIMAT0000604 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01534234 rno-miR-488-3p miRNA MIMAT0005341 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01548278 rno-miR-181d-5p miRNA MIMAT0005299 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID01629065 rno-miR-147 miRNA MIMAT0005297 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01633701 rno-miR-150-3p miRNA MIMAT0017133 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01796667 rno-miR-30e-3p miRNA MIMAT0004720 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01828853 rno-miR-377-3p miRNA MIMAT0003123 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01910578 rno-miR-30d-3p miRNA MIMAT0004722 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01948440 rno-miR-141-3p miRNA MIMAT0000846 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01961481 rno-miR-540-5p miRNA MIMAT0017211 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID01977995 rno-miR-543-3p miRNA MIMAT0003175 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID02226206 rno-miR-9a-5p miRNA MIMAT0000781 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID02437390 rno-miR-1188-5p miRNA MIMAT0017854 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID02524674 rno-miR-98-5p miRNA MIMAT0000819 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID02613569 rno-miR-501-5p miRNA MIMAT0003116 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID02834501 rno-miR-148b-3p miRNA MIMAT0000579 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03046735 rno-let-7e-5p miRNA MIMAT0000777 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03153349 rno-miR-363-3p miRNA MIMAT0003210 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03179908 rno-miR-3560 miRNA MIMAT0017829 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03182058 rno-let-7a-5p miRNA MIMAT0000774 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03234008 rno-miR-181a-5p miRNA MIMAT0000858 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03269740 rno-miR-153-5p miRNA MIMAT0017135 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03309208 rno-miR-758-3p miRNA MIMAT0005335 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03326193 rno-miR-138-2-3p miRNA MIMAT0017127 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03346820 rno-miR-212-3p miRNA MIMAT0000883 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03362501 rno-miR-146b-5p miRNA MIMAT0005595 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03381549 rno-let-7f-5p miRNA MIMAT0000778 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03385633 rno-miR-96-5p miRNA MIMAT0000818 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03432458 rno-miR-181c-5p miRNA MIMAT0000857 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03459285 rno-miR-495 miRNA MIMAT0005320 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03525699 rno-let-7b-5p miRNA MIMAT0000775 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03572525 rno-miR-181b-5p miRNA MIMAT0000859 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03626877 rno-miR-144-3p miRNA MIMAT0000850 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03677141 rno-miR-455-5p miRNA MIMAT0005316 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03835475 rno-miR-92b-3p miRNA MIMAT0005340 Atxn3 mRNA 60331 Prediction 0.2381 Atxn3 RAID03864806 rno-let-7d-5p miRNA MIMAT0000562 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03869376 rno-miR-16-5p miRNA MIMAT0000785 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03869741 rno-let-7c-5p miRNA MIMAT0000776 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03885722 rno-miR-434-5p miRNA MIMAT0017307 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID03900970 rno-miR-203a-3p miRNA MIMAT0000876 Atxn3 mRNA 60331 Prediction 0.2202 Atxn3 RAID03962603 rno-miR-31a-5p miRNA MIMAT0000810 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID04000916 rno-miR-425-5p miRNA MIMAT0005314 Atxn3 mRNA 60331 Prediction 0.1828 Atxn3 RAID04014371 rno-miR-214-3p miRNA MIMAT0000885 Atxn3 mRNA 60331 Prediction 0.1828