DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G018774 Sh3gl2 Rattus norvegicus 116743

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Sh3gl2; Sh3d2a; Sh3p4 rno-let-7a 4 27 UUGAUAUG-UUGGAUGA-UGGAGU ||:|:| ::|: :|| ||||| -CCUGUGCUGGCUGGCUCACCUCC Sh3gl2; Sh3d2a; Sh3p4 rno-let-7c 288 311 UUGGUAUG--UUGGAUGAUGGAGU- |||| ||||| || ||||| CACCACAGAAAACCU-CU-CCUCAC Sh3gl2; Sh3d2a; Sh3p4 rno-let-7d 4 27 UGAUACG-UUGGAUGA-UGGAGA ||:||| ::|: :|| ||||| CCUGUGCUGGCUGGCUCACCUCC Sh3gl2; Sh3d2a; Sh3p4 rno-let-7e 8 38 -UGAUA---UGU-UGGAGGA----UGGAGU- :||: :| ||||||| ||| || UGCUGGCUGGCUCACCUCCUUCUGACC-CAG Sh3gl2; Sh3d2a; Sh3p4 rno-let-7f 4 27 UUGAUAUGUUAGA-UGA-UGGAGU ||:|:| || :|| ||||| -CCUGUGCUGGCUGGCUCACCUCC Sh3gl2; Sh3d2a; Sh3p4 rno-let-7i 286 311 -UGUCGUGUUUGAUGAU--GGAGU- ||| ||||:| || ||||| CACACCACAGAAAACCUCUCCUCAC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-101a 232 249 GAAGUCAAUAGUGUCAUGACAU || :|||||| |||| ----CGUGGUCACAGAACUGG- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-101b 226 249 GAAGUCGA----UAGUGUCAUGACAU :||| :|||||| |||| --CUAGCCCGUGGUCACAGAACUGG- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-10b 120 158 -UGUGUUUA--AGCCAA-------------GAUGUCCC ||||: | |||| ||||||| CACACGUGCCCUGGGUUGGCCUGUGUGCUCCUACAGGA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-132 246 281 GCUGGUA-------------CCGACAUCU--GACAAU |:|:|| ||||||:| ||| UGGCUAUGCCGUUCUCAGGAGGCUGUGGUUCCUGA-- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-134 215 243 GGG-AGACCA--GUUGG---UCAGUGU- || |||| :|:|| :|||||| ACCAUCUGAGACUAGCCCGUGGUCACAG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140 54 75 -GAUGGUAUCCCAUUUUGGUGA- ||:|: ||||| :||:|| ACUGCUUU--GGUAAUGCCGCUU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140* 228 276 ACAGGCACCAAG------------AUGG------------GACACCAU | ||||||| |:|| ||||||| AGCCCGUGGUCACAGAACUGGCUAUGCCGUUCUCAGGAGGCUGUGGUU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-151* 134 158 AUGAUCUGACACUCGAGGAG--CU- :|:| ||||| |||||| |: -GUUGGCCUGUGUGCUCCUACAGGA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-153 236 256 -AGUGAAAACACUGAUACGUU |||| ||:|||||| GUCACAGAACUGGCUAUGCC- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-15b 133 154 ACAUUUGGUACUACACGACGAU- || ::|| :|||||| ||| GGUUGGCCU--GUGUGCUCCUAC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-16 116 139 GCGGUUAUAAAUGCACGA----CGAU- ||| |||||| |:|: AGCCCAC----ACGUGCCCUGGGUUGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-181a* 150 177 CCAUGUUAGU--UGCCAG---CUACCA- ||||: ||||| |||||| -CUACAGGAGACACGGUGAUAGAUGGUA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-181b 82 109 GGGUGG------CUGUCGUUACUUACAA :||| |:| |||:||:||| AUCACGAAUGCAGGCCGCAGUGGAUGA- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-183 98 131 -GUCACUUA---AGA----UGGU----CACGGUAU |||||:|| || :|| ||||| GCAGUGGAUGAUUCAUCAAGCCCACACGUGCCC-- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-187 136 166 GCCG-----ACGU---UGUGUUCUGUGCU- ||| ||| ||| :|||||||: UGGCCUGUGUGCUCCUACAGGAGACACGGU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-193 129 145 -GACCCUGAAACAUCCGGUCAA ||||| |||| || CCUGGGUU------GGCCUGUG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-195 4 18 CGGUUAUAAAGACACGAC-GAU- |||||||| ||: ---------CCUGUGCUGGCUGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-199a 165 196 CUUGUCCAUCAGA-------CUUGUGACCC- :|:|| |:|| |: ||||||| UGAUAGAUGGUAUCUUCCAAGGCCACUGGGC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-20b* 34 66 -GUCU-UCA---CGAGU--GUGACG---UCA- |||| ||| |:|:| |||||| :|| CCAGAUAGUUAAGUUUAACCACUGCUUUGGUA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-212 252 273 CCGGCACU-GACCUCUGACAAU ||||| | ||||:|||| UGCCGUUCUCAGGAGGCUGUG- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-214 125 145 GAC-GGACA-GACACGGACGACA || |||| :|| |||||: GUGCCCUGGGUUG-GCCUGUG-- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-22 1 21 UGUCAAGAAGUUGACCG-UCGAA :|| || :||||| :||| --GGUCCUGU-GCUGGCUGGCUC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-24 178 198 GACAAGGA--CGACUUGACUCGGU |||| || ||||:||| --CUUCCAAGGCC--ACUGGGCCU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-28 258 280 -GAGUUAUCUGACACUCGAGGAA |||| ||:||||| |:|||| UCUCAGGAGGCUGUG-GUUCCUG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-292-3p 181 204 UGUGAGUUUUGGA---CCG--CCGUGAA |||::|| ||| ||||| ----CCAAGGCCACUGGGCCUGGCACA- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-320 185 202 AAGCGGGAGAGUUGGGUCGAAAA ||| || ::||::|| --GGCCA-CUGGGCCUGGCA--- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-324-3p 239 275 GGUCG---UCG---UGGA------CC-CCGUCACC- ||| :|| :|| || ||| |||| ACAGAACUGGCUAUGCCGUUCUCAGGAGGCUGUGGU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-324-5p 116 148 -UGUGGU---UACGGGAUCC--CC---UACGC- :| ||| :||||||:|| || :||:| AGC-CCACACGUGCCCUGGGUUGGCCUGUGUGC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-327 327 349 -UGGGAGUACGG-GGAGUUCC- |||| ||| :||||||| CACCCAAGGGCCAUCUCAAGGU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-328 160 200 -UGCCU---UC--------------CCGUCUCUCCCGGUC |||| || ||| ||||| | CACGGUGAUAGAUGGUAUCUUCCAAGGCCACU-GGGCCUGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-339 142 169 -ACUCGAGGA---CCUCCUGU-CC-CU- || |||||| |||| ||| || || GUGUGCUCCUACAGGAG-ACACGGUGAU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-340 265 286 -CCGAUAUUUCAUUGACU-CUGCCU ||||:| :|| |||| ||| AGGCUGU--GGUUCCUGAUGACC-- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-342 130 159 CUGCCCACGCUAAAGACACAC--------UCU- :|||| :|: ||||||| :|| -CUGGGU-UGGC--CUGUGUGCUCCUACAGGAG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-344 1 23 UGCCAGUCCGAAACCGAUCUAGU- |||| |: |||||:| ||| --GGUCCUGUGCUGGCUGGCUCAC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-345 97 141 -CGUGACCUGA--------UC--------------CCCAGUCGU ||| ||||: || ||||::|| CGCAGUGGAUGAUUCAUCAAGCCCACACGUGCCCUGGGUUGGCC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-349 156 200 -UCU---CCAAU-UCUGUCGU---------------CCC-GAC ||| ||| |||::|:| ||| ||| GAGACACGGUGAUAGAUGGUAUCUUCCAAGGCCACUGGGCCUGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-34a 211 233 -UUGUUGGUCGAUUCUGUGACGGU ||| |||| ||:|||| ||| AAAC-ACCAUCUGAGACUA-GCCC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-34b 34 62 -GUUAGUCGAUUAAU----GUGACGGAU ||: :||:||| ||||||:| CCAGAUAGUUAAGUUUAACCACUGCUUU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-351 131 161 GUCCGAGUUU-C-C-CGAGGA-GUCC-CU- :||:| : | | |||||| |||| || UGGGUUGGCCUGUGUGCUCCUACAGGAGAC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-377 127 148 -GGUUUUCAAC-GGAAACACACUA || ::|||| || |||||| GCCCUGGGUUGGCC--UGUGUGC- Sh3gl2; Sh3d2a; Sh3p4 rno-miR-421 75 99 -GUUGUUUGUAAA--UUAC-UCCGG- |||: |||| |||| ||||| CCAAU--ACAUCACGAAUGCAGGCCG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-422b 24 49 CGGAAGACUGAGGU---UCAGGUCA- ||||||||| ||| |||: ||| UCCUUCUGAC-CCAGAUAGUUAAGUU Sh3gl2; Sh3d2a; Sh3p4 rno-let-7a 3 26 uuGAUAUGUUGGA-UGA-UGGAGu ||:|:| : || :|| ||||| tcCTGTGCTGGCTGGCTCACCTCc Sh3gl2; Sh3d2a; Sh3p4 rno-let-7c 290 309 uugGUAUGUUGGAUGAUGGAGU || | ||||| || ||||| ccaCAGAAAACCT-CT-CCTCA Sh3gl2; Sh3d2a; Sh3p4 rno-let-7e 4 26 uGAUAUGUUGGA-GGA-UGGAGu ||:|:| : || || ||||| cCTGTGCTGGCTGGCTCACCTCc Sh3gl2; Sh3d2a; Sh3p4 rno-let-7f 3 26 uuGAUAUGUUAGA-UGA-UGGAGu ||:|:| : || :|| ||||| tcCTGTGCTGGCTGGCTCACCTCc Sh3gl2; Sh3d2a; Sh3p4 rno-let-7i 287 309 UGUCGUG---UUUGAUGAUGGAGU ||| ||| |||| || ||||| ACACCACAGAAAACCTCT-CCTCA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-101a 228 249 gaaGUCAAUAGUGUCAUGACau | || :|||||| |||| agcCCGTGGTCACAGAACTGgc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-101b 228 249 gaaGUCGAUAGUGUCAUGACau | |: :|||||| |||| agcCCGTGGTCACAGAACTGgc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-134 216 241 GGGAGAC-CAG-UUG---GUCAGUGU || |||| | | |:| ::|||||| CCATCTGAGACTAGCCCGTGGTCACA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140 29 56 GA-UGG---UAUC---CCAUUUUGGUGA || ||| |||| || ||||||| CTGACCCAGATAGTTAAGTTTAACCACT Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140* 246 275 ACAGGCAC--CAAGA----UGGGACACCAu || |: || ||||| | ||||||| TGGCTATGCCGTTCTCAGGAGGCTGTGGTt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140* 217 238 acAGGCACCAAGAUGGGACACCAu ||:| | ||| || ||||| caTCTGAG--ACTAGCCCGTGGTc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-151* 133 154 augAUCUGACACUCGAGGAgcu |:| ||||| |||||| ggtTGGCCTGTGTGCTCCTaca Sh3gl2; Sh3d2a; Sh3p4 rno-miR-153 237 256 AGUGAAAACACUGAUACGuu |||| ||:|||||| TCACAGAACTGGCTATGCcg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-16 131 152 gcgguuauaaAUGCACGACGAU |::||||| ||| tgggttggccTGTGTGCTCCTA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-181a* 155 175 CC-AUGUUAGUUGCCAGCUACCA || ||| |:::| | |||||| GGAGACA--CGGTGATAGATGGT Sh3gl2; Sh3d2a; Sh3p4 rno-miR-181b 88 109 ggguGGCUGUCGUUACUUACaa | |:| |||:||:||| aatgCAGGCCGCAGTGGATGat Sh3gl2; Sh3d2a; Sh3p4 rno-miR-183 99 132 GUCACUUA------AGAU--GGU---CACGGUAu |||||:|| || | ||| ||||| | CAGTGGATGATTCATCAAGCCCACACGTGCCCTg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-187 144 164 gcCGACGUUGUGUUCUGUGCu ||| | ||| :||||||| gtGCTCCTACAGGAGACACGg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-193 130 144 GACCCUGAAACAUCCGGUCAa ||||| || |||| || CTGGG---TT---GGCCTGTg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-195 1 16 cgguuauaAAGACACGA-CGAu | ||||||| ||| ------ggTCCTGTGCTGGCTg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-199a 168 194 cuuguCCAUCAGA-----CUUGUGACCC |||| ||| |: ||||||| tagatGGTA-TCTTCCAAGGCCACTGGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-20b* 35 61 GUCU-UCA---CGAGU--GUGACGuca |||| ||| |:|:| |||||| CAGATAGTTAAGTTTAACCACTGCttt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-212 252 273 cCGGC-ACUGACCUCUGACAau |||| | | ||||:|||| tGCCGTTCTCAGGAGGCTGTgg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-214 125 145 gAC-GGACAGACACGGACGACA || |||| | ||||| ||| gTGCCCTGGGTTGGCCTG-TGT Sh3gl2; Sh3d2a; Sh3p4 rno-miR-24 176 197 gACAAGG--ACGACUUGACUCGGu | |||| || ||||:||| aTCTTCCAAGGC--CACTGGGCCt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-28 259 279 GAGUUAUCUGACACUCGAGGAa ||||: ||:|||| :|:|||| CTCAGGAGGCTGT-GGTTCCTg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-292-3p 177 204 ugugaGUUUUG--GACC---GCCGUGaa |||::| |||| :||||| tcttcCAAGGCCACTGGGCCTGGCACat Sh3gl2; Sh3d2a; Sh3p4 rno-miR-320 179 210 AAG---CGGGAGAGUUGG-----GU-CGAAAa ||| | || || ::|| || ||||| TTCCAAGGCCACTGGGCCTGGCACATGCTTTa Sh3gl2; Sh3d2a; Sh3p4 rno-miR-324-3p 249 273 GGU-CGUCGUG-GACC-CCGUCACC |:| || |: | | || ||| |||| CTATGCCGTTCTCAGGAGGCTGTGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-324-5p 119 139 uGUGGUUACGGGAUCCCCUACgc ||| :|||||| ||| || cCACACGTGCCCT--GGGTTGgc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-327 328 347 UGGGAGUACGG-GGAGUUCC |||| : ||| :||||||| ACCCAAGGGCCATCTCAAGG Sh3gl2; Sh3d2a; Sh3p4 rno-miR-328 179 198 ugccUUCCCGUCUCUCCCGGuc |||| || ||||| ttccAAGGCCACT--GGGCCtg Sh3gl2; Sh3d2a; Sh3p4 rno-miR-333 276 293 uuuucAUUGAUCGUGUGGUG |:|| |||||||| cctgaTGAC--CCACACCAC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-339 143 165 ACUCGAGGA---CCUCCUGUCCCu || |||||| ||| |||| || TGTGCTCCTACAGGA-GACACGGt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-340 247 271 CCGAUAUUUCAUUGA---CUCUGCCu ||||||: || || |||:| | GGCTATGCCGT-TCTCAGGAGGCTGt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-342 120 149 cUGCCCACG----CUAA--AGACACACucu || |||| |:|| ||||||| cACACGTGCCCTGGGTTGGCCTGTGTGctc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-345 121 140 cGUG-ACCUGAUCCCCAGUCGu ||| || || ||||::|| aCACGTGCCCT--GGGTTGGCc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-349 169 197 UCU-CC----AA--UUCUGUCGUCCCGac ||| || || |||:| | |||| AGATGGTATCTTCCAAGGCCACTGGGCct Sh3gl2; Sh3d2a; Sh3p4 rno-miR-34a 212 232 UUGUUGGUCGAUUCUGUGA-CGGu ||| |||| ||:|| ||| ||| AAC-ACCATCTGAG--ACTAGCCc Sh3gl2; Sh3d2a; Sh3p4 rno-miR-34b 35 61 GUUAGUCGAUU--AAU--GUGACGGAu ||: :||:||| ||| ||||||:| CAGATAGTTAAGTTTAACCACTGCTTt Sh3gl2; Sh3d2a; Sh3p4 rno-miR-351 135 158 guCCGAGUUUCCCGAGGA-GUCCcu ||| | : | |||||| |||| ttGGC-CTGTGTGCTCCTACAGGag Sh3gl2; Sh3d2a; Sh3p4 rno-miR-377 128 148 GGUUUUCAA-CGGAAACACACua || ::||| ||| |||||| CCCTGGGTTGGCC--TGTGTGct Sh3gl2; Sh3d2a; Sh3p4 rno-miR-421 73 97 guuGUU-UGUA--AAUUAC-UCCGG ||| |||| |||| ||||| ttcCAATACATCACGAATGCAGGCC Sh3gl2; Sh3d2a; Sh3p4 rno-miR-10b 150 157 ------UGUGUUUA--AGCCAA-------------GAUGUCCC ||||: | |||| ||||||| AAGCCCACACGUGCCCUGGGUUGGCCUGUGUGCUCCUACAGGA Sh3gl2; Sh3d2a; Sh3p4 rno-miR-140* 268 275 A--CAGG--C---ACCAAGAUGG------------GACACCAU ||| | ||| |:|| ||||||| GUGGUCACAGAACUGGCUAUGCCGUUCUCAGGAGGCUGUGGUU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-187 157 164 --------------GCCG-----ACGU---UGUGUUCUGUGCU :||| ||| ||| :|||||||: CACGUGCCCUGGGUUGGCCUGUGUGCUCCUACAGGAGACACGGU Sh3gl2; Sh3d2a; Sh3p4 rno-miR-333 286 293 UUU------------------UCAUUGAUC-----GUGUGGUG :|| ||: |||||||| AUGCCGUUCUCAGGAGGCUGUGGUUCCUGAUGACCCACACCACA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sh3gl2 RAID00429470 rno-miR-466c-5p miRNA MIMAT0005279 Sh3gl2 mRNA 116743 Prediction 0.1828 Sh3gl2 RAID01493507 rno-miR-487b-5p miRNA MIMAT0017221 Sh3gl2 mRNA 116743 Prediction 0.1828 Sh3gl2 RAID01652047 rno-miR-330-3p miRNA MIMAT0000568 Sh3gl2 mRNA 116743 Prediction 0.1828 Sh3gl2 RAID02303439 rno-miR-6328 miRNA MIMAT0025067 Sh3gl2 mRNA 116743 Prediction 0.1828 Sh3gl2 RAID03621935 rno-miR-140-5p miRNA MIMAT0000573 Sh3gl2 mRNA 116743 Prediction 0.1828