DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Prkci; Pkcl | rno-miR-106b | 43 | 63 | UAGAC-GUGACAGUCGUGAAAU- | | ||| ||:||||:|||| | ---GGUCACAGUUAGCAUUUUAU |
Prkci; Pkcl | rno-miR-122a | 261 | 280 | UGUUUGUGGUAACAGUGUGAGGU | :| |:|||| |||||| | ---UGCUGCGUUGUGACACUCA- |
Prkci; Pkcl | rno-miR-128b | 205 | 227 | -CUUUCUCUGGCCAAGUGACACU | ||||| ||| || |||| | AGAAAG-GACAGUGUCUUUGUGU |
Prkci; Pkcl | rno-miR-134 | 24 | 51 | GGGAGACC-AGUUGG--------UCAGUGU- | ||| |||||| :|||||| | ----AUGGAUCAACCGUUAGCCCGGUCACAG |
Prkci; Pkcl | rno-miR-135a | 325 | 362 | AGUGUAUC--------------CUUAUUUUUCGGUAU- | :|||:| ||:|::|::|||||: | -GGCAUGGAAGGCUUAAUUGUAGAGUGGAGGGCCAUGC |
Prkci; Pkcl | rno-miR-135b | 325 | 362 | GUGUAUC--------------CUUACUUUUCGGUAU- | :|||:| ||:||:|::|||||: | GGCAUGGAAGGCUUAAUUGUAGAGUGGAGGGCCAUGC |
Prkci; Pkcl | rno-miR-139 | 323 | 349 | -UCUGUGCA---CG---UGACAUCU- | ||:||:| || |:|||||| | AAGGCAUGGAAGGCUUAAUUGUAGAG |
Prkci; Pkcl | rno-miR-16 | 245 | 268 | GCGGUUAUAAAUGC--ACGACGAU | |:||| :| |||||| | UGUCAAAGAAAGCCUCUGCUGCG- |
Prkci; Pkcl | rno-miR-185 | 178 | 193 | CUUGACGGAAAGAGAGGU- | |||: ||||||| | ---AUGCUUG-CUCUCCAG |
Prkci; Pkcl | rno-miR-192 | 306 | 325 | CCGACAGUUAAGUAUCCAGUC | |:||||| ||: :|||:| | AGUUGUCACUUU--GGGUUAA |
Prkci; Pkcl | rno-miR-196b | 210 | 243 | GGUUGUUG------------UCCUUUGAUGGAU- | :|||: ||||||| :|||| | -GGACAGUGUCUUUGUGUAAAGGAAACAGCCUAG |
Prkci; Pkcl | rno-miR-200a | 264 | 289 | -UGUAGCAA--UG-GUCUGUC-ACAAU | :|:|:|| || ||| :| || | UGCGUUGUGACACUCAGUGGGAUGA-- |
Prkci; Pkcl | rno-miR-205 | 332 | 357 | GUCUGAGGC--CACCUUACUUCCU- | ||:||: || ||:||:|||: | AAGGCUUAAUUGUAGAGUGGAGGGC |
Prkci; Pkcl | rno-miR-20a | 38 | 63 | GAUGGA-C-GUGAUAUUCGUGAAAU- | :|| | ||| :| ||||:|||| | -AGCCCGGUCACAGUUAGCAUUUUAU |
Prkci; Pkcl | rno-miR-214 | 241 | 267 | GACGGACAGACA----CGGA--CGACA | ||:|||| |||| |||| | -AGCUUGUCAAAGAAAGCCUCUGCUGC |
Prkci; Pkcl | rno-miR-219 | 263 | 281 | UCUUAACGCAAACCUGUUAGU- | |||||| |||| ||| | ----CUGCGUUGUGACACUCAG |
Prkci; Pkcl | rno-miR-23a | 251 | 275 | CCUUUAGG-GAC--CGUUACACUA | |||| || ||| ||: ||||| | AGAAAGCCUCUGCUGCGUUGUGAC |
Prkci; Pkcl | rno-miR-28 | 83 | 106 | -GAGUUAUCUGACACUCGAGGAA | ||||||| |||| ||| || | UCUCAAUAUCCUGUUAGCGACUA |
Prkci; Pkcl | rno-miR-290 | 391 | 410 | UUUUUCACGGGGGUAUCAAACUC | :||| |||:| ||||||| | --UGAGUUCCCUC--AGUUUGAA |
Prkci; Pkcl | rno-miR-292-5p | 391 | 410 | GUUUUCUCGGGGGUCAAACUCA | :|| |||:|||||||| | --UGAGUUCCCUCAGUUUGAA- |
Prkci; Pkcl | rno-miR-296 | 325 | 359 | -UGU-CCU--------AAC-UC-C-CC-CCCGGGA | :|| ||| ||| || | || ||||| | GGCAUGGAAGGCUUAAUUGUAGAGUGGAGGGCCA- |
Prkci; Pkcl | rno-miR-298 | 229 | 266 | -CCUUCUUGUCGG---GA------------GGAGACGG- | ||| ||||||| || |||||||: | AGGA--AACAGCCUAGCUUGUCAAAGAAAGCCUCUGCUG |
Prkci; Pkcl | rno-miR-29c* | 271 | 301 | CUUGUG-GUC-CUCUU------UAGCCAGU | :|||| ||| |:|| ||| ||| | UGACACUCAGUGGGAUGACAUCAUCAGUCU |
Prkci; Pkcl | rno-miR-324-3p | 304 | 333 | GGUCGUC-GUGGACCCCG--UC---ACC- | |||: | |||:| |||: || ||| | ACAGUUGUCACUUUGGGUUAAGGCAUGGA |
Prkci; Pkcl | rno-miR-324-5p | 261 | 291 | -UGUGGU--UACG--GGAUC-CCCUAC-GC | :| |: :|| |: || |||||| | | UGCUGCGUUGUGACACUCAGUGGGAUGACA |
Prkci; Pkcl | rno-miR-328 | 327 | 360 | -UGCCUUCC-------CGUCU---CUCCCGGUC | |:|||||| |:||| |||||||| | CAUGGAAGGCUUAAUUGUAGAGUGGAGGGCCAU |
Prkci; Pkcl | rno-miR-337 | 106 | 133 | UUUCCGUAGUAUAUC-------CUCGACUU | ||| ||||||||| ||||| | -UAGGAAUCAUAUAGCUAAGCAGAGCUA-- |
Prkci; Pkcl | rno-miR-339 | 191 | 234 | ACU-CGAGGACC------UCCUGUC--------------CCU | || |||||| ||||||| ||| | AGAGGCUCCUAAUGAGAAAGGACAGUGUCUUUGUGUAAAGGAA |
Prkci; Pkcl | rno-miR-341 | 26 | 48 | UGACUGGCUGGCU----GGCUAGCU | ||:| |||| |||:|| | --GGAUCAACCGUUAGCCCGGUCA- |
Prkci; Pkcl | rno-miR-343 | 314 | 356 | -AGACCCG----UGUGCCU---------------C-CCUCU | |:||||: :||:||| | ||||: | CUUUGGGUUAAGGCAUGGAAGGCUUAAUUGUAGAGUGGAGGG |
Prkci; Pkcl | rno-miR-347 | 269 | 288 | ACCCGCUG-G-GUCUCCCUGU | |:||| | ||| ||||: | --UGUGACACUCAGUGGGAUG |
Prkci; Pkcl | rno-miR-349 | 317 | 339 | UCUCCAAUUCUGU-CGUCCCGAC | :|||||||:|| | | |||| | -UGGGUUAAGGCAUGGAAGGCUU |
Prkci; Pkcl | rno-miR-34a | 232 | 266 | -UUGUUGG-UCGA-----UUCUGU----GACGGU | ||||:|| |||| |||| ||||: | AAACAGCCUAGCUUGUCAAAGAAAGCCUCUGCUG |
Prkci; Pkcl | rno-miR-370 | 142 | 183 | -UUGGUCCAAGG---------------UGGGGUCGUC-CG | |||:|| |||| ||:||||: || | AAACUAGUUUCCUGACAGUCAUGUCAAACUCCAGUUAUGCU |
Prkci; Pkcl | rno-miR-422b | 147 | 178 | -CGGAAGACUGA------GGUUC-AGGUCA- | |::| ||||| :||| |||||| | AGUUUCCUGACAGUCAUGUCAAACUCCAGUU |
Prkci; Pkcl | rno-miR-485 | 243 | 263 | CUUAAGUAGUGCCGGUCGGAGA- | |::||| | ||||||| | ---CUUGUCAAAGAAAGCCUCUG |
Prkci; Pkcl | rno-miR-497 | 165 | 188 | AUGUUUGGUGUCAC-ACGA-CGAC | |||||: |||| |||| ||| | -UCAAACUCCAGUUAUGCUUGCUC |
Prkci; Pkcl | rno-miR-7 | 283 | 306 | -UUGUUUUAGUGAUCAGAAGGU- | :|::| ||||: ||||| ||| | GGAUGACAUCAUCAGUCUCCCAC |
Prkci; Pkcl | rno-miR-7b | 283 | 306 | -UUGUUUUAGUGUUCAGAAGGU- | :|::| ||||: ||||| ||| | GGAUGACAUCAUCAGUCUCCCAC |
Prkci; Pkcl | rno-miR-106b | 40 | 61 | uaGAC-GUGACAGUCGUGAAAU | | | ||| ||:||||:|||| | ccCGGTCACAGTTAGCATTTTA |
Prkci; Pkcl | rno-miR-122a | 258 | 280 | uguuugugGUAACAGUGUGAGgu | |:|||| |||||| | ctctgctgCGTTGTGACACTCag |
Prkci; Pkcl | rno-miR-128b | 206 | 226 | CUUUCUCUGGCCAAGUGACACu | ||||| ||| | || :|||| | GAAAG-GACAGTGTCTTTGTGt |
Prkci; Pkcl | rno-miR-134 | 28 | 49 | gggagacCAGUU-GGUCAGUGU | ||:|: ||:|||||| | atcaaccGTTAGCCCGGTCACA |
Prkci; Pkcl | rno-miR-135a | 336 | 360 | agugUAUC--CUUAUUUUUCGGUAu | || | ||:|::|::||||| | cttaATTGTAGAGTGGAGGGCCATg |
Prkci; Pkcl | rno-miR-135b | 337 | 360 | gugUAUC--CUUACUUUUCGGUAu | || | ||:||:|::||||| | ttaATTGTAGAGTGGAGGGCCATg |
Prkci; Pkcl | rno-miR-139 | 324 | 347 | UCUGUGC---ACG---UGACAUCU | ||:||:| || |:|||||| | AGGCATGGAAGGCTTAATTGTAGA |
Prkci; Pkcl | rno-miR-16 | 245 | 268 | gCGGUUAUAAAUG--CACGACGau | |:||| : :| |||||| | tGTCAAAGAAAGCCTCTGCTGCgt |
Prkci; Pkcl | rno-miR-185 | 175 | 191 | cuugACGGAAAGAGAGGU | || ||| ||||||| | gttaTG-CTTGCTCTCCA |
Prkci; Pkcl | rno-miR-193 | 328 | 361 | gACC--CUGA---AACAU--------CCGGUcaa | ||| |:|| ||||| ||||| | aTGGAAGGCTTAATTGTAGAGTGGAGGGCCAtgc |
Prkci; Pkcl | rno-miR-196b | 221 | 241 | gguuguUGUCCUUUGAUGGAU | | ||||||| :|||| | ttgtgtAAAGGAAACAGCCTA |
Prkci; Pkcl | rno-miR-200a | 265 | 285 | uGUAGCAAUGGUCUGUCACaau | |:|:|| | || ||||| | gCGTTGTGA-CACTCAGTGgga |
Prkci; Pkcl | rno-miR-214 | 239 | 266 | GA-CGGACAG------ACACGGACGACa | || ||:|||| | :|||||| | CTAGCTTGTCAAAGAAAGCCTCTGCTGc |
Prkci; Pkcl | rno-miR-219 | 259 | 279 | ucuuaACGCAAACCUGUUAGU | |||||| |||| ||| | tctgcTGCGTTGTGACACTCA |
Prkci; Pkcl | rno-miR-28 | 84 | 105 | GAGUUAUCUGACACUCGAGGAa | ||||||| |||| ||| || | CTCAATATCCTGTTAGCGACTa |
Prkci; Pkcl | rno-miR-290 | 389 | 409 | uuuuUCACGGGGGUAUCAAACUc | ||| |||:| ||||||| | tctgAGTTCCCTC--AGTTTGAa |
Prkci; Pkcl | rno-miR-292-5p | 387 | 410 | guuuuCUC--GGGGGUCAAACUca | ||| |||:|||||||| | tttctGAGTTCCCTCAGTTTGAat |
Prkci; Pkcl | rno-miR-296 | 331 | 359 | ugUCC----UAA---CUCCCC-CCCGGga | ||| ||| ||| || ||||| | gaAGGCTTAATTGTAGAGTGGAGGGCCat |
Prkci; Pkcl | rno-miR-298 | 230 | 264 | CCUUCUUGUCGG---GA------------GGAGACGg | ||| ||||||| || ||||||| | GGA--AACAGCCTAGCTTGTCAAAGAAAGCCTCTGCt |
Prkci; Pkcl | rno-miR-324-5p | 264 | 289 | ugugguuAC-GGGA-UC-CCCUACgc | || | || || |||||| | tgcgttgTGACACTCAGTGGGATGac |
Prkci; Pkcl | rno-miR-328 | 328 | 359 | UGCCUUCC-------CGUCU---CUCCCGGUc | |:|||||| |:||| |||||||| | ATGGAAGGCTTAATTGTAGAGTGGAGGGCCAt |
Prkci; Pkcl | rno-miR-337 | 105 | 134 | UUUCCGUAGUAUAUC-------CUCGACUU | | ||| ||||||||| ||||| || | ATAGGAATCATATAGCTAAGCAGAGCTAAA |
Prkci; Pkcl | rno-miR-341 | 24 | 48 | UGACUGGCUGGC--U--GGCUAGcu | |: ||:| |||| | |||:|| | ATGGATCAACCGTTAGCCCGGTCac |
Prkci; Pkcl | rno-miR-343 | 330 | 354 | agacCCGUGU--GC--CUC-CCUCu | ||| :| :| ||| |||| | ggaaGGCTTAATTGTAGAGTGGAGg |
Prkci; Pkcl | rno-miR-349 | 316 | 338 | ucuCCAAUUCUGU-CGUCCCGAc | |||||||:|| | | |||| | ttgGGTTAAGGCATGGAAGGCTt |
Prkci; Pkcl | rno-miR-34a | 233 | 265 | UUGUUGG-UCGA-----UUCU----GUGACGgu | ||||:|| |||| |||| | |||| | AACAGCCTAGCTTGTCAAAGAAAGCCTCTGCtg |
Prkci; Pkcl | rno-miR-370 | 170 | 196 | uuGGUC----C-AAGGUGGGGUCGUCCG | |||| | || | |:|||| |||| | ctCCAGTTATGCTTGCTCTCCAG-AGGC |
Prkci; Pkcl | rno-miR-377 | 205 | 229 | ggUUUUC---AACGGAAACACACUa | |||:| ||:|||||||| | | agAAAGGACAGTGTCTTTGTGTAAa |
Prkci; Pkcl | rno-miR-422b | 148 | 176 | CGGAAGACUG-------AGGUUCAGGUCA | |::| ||||| || || |||||| | GTTTCCTGACAGTCATGTCAAACTCCAGT |
Prkci; Pkcl | rno-miR-485 | 240 | 261 | cUUAAGUAGUGCCGGUCGGAGA | |: |::||| | ||||||| | tAGCTTGTCAAAGAAAGCCTCT |
Prkci; Pkcl | rno-miR-497 | 164 | 187 | auGUUUGGUGUC-ACACG-ACGAc | |||||: ||| | ||| |||| | gtCAAACTCCAGTTATGCTTGCTc |
Prkci; Pkcl | rno-miR-7 | 284 | 304 | uUGUUUUAGUGAUCAGAAGGU | |::| ||||: ||||| ||| | gATGACATCATCAGTCTCCCA |
Prkci; Pkcl | rno-miR-7b | 284 | 304 | uUGUUUUAGUGUUCAGAAGGU | |::| ||||: ||||| ||| | gATGACATCATCAGTCTCCCA |
Prkci; Pkcl | rno-miR-290 | 402 | 409 | UUU----------------------UUCACGGGGGUAUCAAACUC | :||| |||:| ||||||| | AUAUCUGCUAGUGUUACUGGUUUCUGAGUUCCCUC--AGUUUGAA |
Prkci; Pkcl | rno-miR-298 | 257 | 264 | --------CCUUCUUGUCGGGA---------------GGAGACGG | |||| ||||||: |||||||: | UGUGUAAAGGAA--ACAGCCUAGCUUGUCAAAGAAAGCCUCUGCUG |
Prkci; Pkcl | rno-miR-328 | 352 | 359 | -----------UGCCUUCC-------CGUC---UCUCCCGGUC | |:|||||| |:|| :|||||||| | UGGGUUAAGGCAUGGAAGGCUUAAUUGUAGAGUGGAGGGCCAU |