Siah1
DNA & RNA Element - microRNA
Mirbase AccmiRNA NameGene IDGene SymbolmiRNA AlignmentAlignmentGene AlignmentmiRNA StartmiRNA EndGene StartGene EndGenome CoordinatesConservationAlign ScoreSeed CatEnergymirSVR Score
MIMAT0000554rno-miR-324-3p140941Siah1aggucgucguggaccCCGUCAcc |||||| uguuuuuaaaaaaaGGCAGUuu39978999[rn4:19:21740668-21740689:+]0.64421200-13.47-0.1229
MIMAT0004655rno-miR-345-3p140941Siah1aagAGGUCUGGGGAUCAAGUCCc |:| :|: || |||||| cuUUCUUUUCUGUAAUUCAGGu221532553[rn4:19:21740222-21740243:+]0.64121246-14.17-0.1390
MIMAT0000603rno-miR-20a*140941Siah1aacAUUCACGAGCAUUAC-GUCa ||| |||| ||||| ||| caUAAUUGCU--UAAUGUCAGa220598617[rn4:19:21740288-21740307:+]0.64121280-10.55-1.1098
MIMAT0000607rno-miR-7a*140941Siah1auaccgucUGACAC-UAAACAACa ||| || :||||||| uuucugaACUUUGUGUUUGUUGu216268290[rn4:19:21739958-21739980:+]0.66601547-14.69-0.9920
MIMAT0000607rno-miR-7a*140941Siah1auacCGUCUGAC--ACUAAACAACa |:|||:|| || |||||| guuGUAGAUUGAUUGUAUUGUUGa220286309[rn4:19:21739976-21739999:+]0.66601346-15.79-0.1156
MIMAT0000607rno-miR-7a*140941Siah1auaccgucugacACUAAACAAca | ||||||| auuaaaguaaaUCAUUUGUUuu312962983[rn4:19:21740652-21740673:+]0.64421270-3.82-0.2145
MIMAT0004705rno-let-7b*140941Siah1accCU-UCCGUCAUCCAACAUAuc || :|||| | |||||| aaGAUGGGCA-UCUUUUGUAUua321224245[rn4:19:21739914-21739935:+]0.66601290-10.73-0.1234
MIMAT0000783rno-miR-10b140941Siah1augUGUUUAAGCCAA-GAUGUCCc | ||| | ||| |||||| aaAGAAAAGCUGUUAAUACAGGa221128150[rn4:19:21739818-21739840:+]0.66601276-9.85-0.2085
MIMAT0004711rno-miR-21*140941Siah1acugucggguagcugaCGACAAc |||||| uaaauaaaaagaaaaGCUGUUa28121142[rn4:19:21739811-21739832:+]0.66601206-8.94-0.3366
MIMAT0004716rno-miR-28*140941Siah1aagguccucgaguguuAGAUCAc |||||| uuugcuaauuuuuauUCUAGUu28491512[rn4:19:21740181-21740202:+]0.57731206-7.73-0.2396
MIMAT0004717rno-miR-29b-2*140941Siah1agauucggugguacacUUUGGUc |||||| aaauaauucaacaguAAACCAc28184205[rn4:19:21739874-21739895:+]0.66601206-10.36-0.1376
MIMAT0004718rno-miR-29a*140941Siah1agacuugUGGUUUUCUUUAGUca |::|||: |||||| uuuguaAUUAAAGUAAAUCAuu317956977[rn4:19:21740646-21740667:+]0.59291400-10.01-0.1389
MIMAT0004720rno-miR-30e*140941Siah1acgaCAUUUGUAGGCUGACUUUc ||||| || ||||||| acaGUAAA---CC-ACUGAAAa220194211[rn4:19:21739884-21739901:+]0.66601497-11.67-0.9996
MIMAT0004722rno-miR-30d*140941Siah1acgUCGUUUGUAGACUGACUUUc ||:|||| | ||||||| acAGUAAAC--C--ACUGAAAa221194211[rn4:19:21739884-21739901:+]0.66601507-16.05-0.9996
MIMAT0000809rno-miR-30a*140941Siah1acgacguUUGUAGGCUGACUUUc |::| | ||||||| uucaacAGUAAACCACUGAAAa217190211[rn4:19:21739880-21739901:+]0.66601487-12.04-1.0218
MIMAT0004731rno-miR-125b*140941Siah1auccaggguucUCGGACUGAAca | ::|||||| ucauuaaauaAAUUUGACUUuc313515536[rn4:19:21740205-21740226:+]0.64121240-7.33-0.3195
MIMAT0000831rno-miR-126*140941Siah1agcGCAUGGUUUUCAUUAU-UAc :||| :|| | ||||| || caUGUAGUAACACUAAUAUAUu220159180[rn4:19:21739849-21739870:+]0.66601270-5.83-1.2028
MIMAT0000831rno-miR-126*140941Siah1agcgcaugguuuucaUUAUUAc |||||| cuaauauauuuaaaAAUAAUu28171191[rn4:19:21739861-21739881:+]0.66601206-1.95-0.1972
MIMAT0000893rno-miR-290140941Siah1auuuuucacggggguaUCAAACuc |||||| uuuuuaaaaaaaggcAGUUUGca399801002[rn4:19:21740670-21740692:+]0.64421200-9.16-0.1594
MIMAT0000894rno-miR-291a-5p140941Siah1aucUCUCCCGGAGGUGAAACUAc || || ||: :|||||| uaAGUUAGCGUCU-UUUUGAUa221575595[rn4:19:21740265-21740285:+]0.64121346-10.48-0.1006
MIMAT0000899rno-miR-297140941Siah1aguACGUAU--GUACGU-GU-GUAUGUa |||| | :|||| || |||||| uuUGCAAAAGAGUGCAUCAUCAUACAc222925951[rn4:19:21740615-21740641:+]0.54151276-15.90-0.6894
MIMAT0000901rno-miR-299140941Siah1auacauacacccUGCCAUUUGGu || ||||||| aaaauaauucaACAGUAAACCa212183204[rn4:19:21739873-21739894:+]0.66601477-11.22-1.2894
MIMAT0000901rno-miR-299140941Siah1auaCAUACACCCUG---CCAUUUGGu |||| || |: |||||:| caGUAUUUGUAAUUAAAGUAAAUCa221951975[rn4:19:21740641-21740665:+]0.59291310-10.30-0.1555
MIMAT0004743rno-miR-300-5p140941Siah1auguUUCCUAUUGGAGAGAAGUu |:| | |||||||||| aucAGGCUUUUCCUCUCUUCAa220855876[rn4:19:21740545-21740566:+]0.54151597-22.35-1.0799
MIMAT0000902rno-miR-300-3p140941Siah1acuucucucgaacgggAACGUAu |||||| uaauacaggaaacagUUGCAUg28141162[rn4:19:21739831-21739852:+]0.66601206-9.12-0.1062
MIMAT0001547rno-miR-450a140941Siah1aguaauccUUGUGUAGCGUUUUu ::|| |:|||||| aaaaaaaGGCAGUUUGCAAAAa2169851006[rn4:19:21740675-21740696:+]0.64421356-12.08-0.1813
MIMAT0003113rno-miR-489140941Siah1acgacGGUAUAUAC--ACUACAGUaa ||||| || | |||||| auauCCAUAAUUGCUUAAUGUCAga320593617[rn4:19:21740283-21740307:+]0.64121380-11.83-0.1072
MIMAT0003116rno-miR-501140941Siah1aaaagugggucccUGUUUCCUaa | |||||| ucuuuuguauuaAGAAAGGAaa311234255[rn4:19:21739924-21739945:+]0.66601220-5.62-0.1141
MIMAT0003175rno-miR-543*140941Siah1aucuucacguggcgcUUACAAa |||||| gcaguuugcaaaaaAAUGUUu289931013[rn4:19:21740683-21740703:+]0.64421206-8.90-0.1825
MIMAT0004791rno-miR-379*140941Siah1acaaucaccugguacaAUGUAUc |||||| gaaguuuguguucagUACAUAc28616637[rn4:19:21740306-21740327:+]0.64121206-12.24-0.1017
MIMAT0003195rno-miR-376b-5p140941Siah1aauugguaucuuccUUAUAGGUg :||||||| uuagcgucuuuuuGAUAUCCAu210579600[rn4:19:21740269-21740290:+]0.64121417-10.79-1.0783
MIMAT0003207rno-miR-369-3p140941Siah1auuuCUAGUUG-GUACAUAAUaa |: || | : ||||||| gauGGGCAUCUUUUGUAUUAag319226247[rn4:19:21739916-21739937:+]0.66601290-7.44-0.1365
MIMAT0003380rno-miR-505140941Siah1accuuuGGUCGUUCACAACUg |::|| |||||| | uauuuCUGGCCAGUGUUUAa2161433[rn4:19:21739704-21739723:+]0.66601270-11.78-0.1409
MIMAT0003380rno-miR-505140941Siah1accuuuggucguucACAACUg |||||| agauugauuguauUGUUGAc28291310[rn4:19:21739981-21740000:+]0.66601206-10.28-0.1189
MIMAT0005280rno-miR-743b140941Siah1aagauaagucauaccACAGAAAg |||:||| uaaaguaaaucauuUGUUUUUa29964985[rn4:19:21740654-21740675:+]0.64421240-5.01-0.1118
MIMAT0005280rno-miR-743b140941Siah1aagauaagucauaccaCAGAAAg |||||| aaaaaaauguuuuugGUCUUUu2810021023[rn4:19:21740692-21740713:+]0.64421206-6.94-0.2391
MIMAT0005281rno-miR-871140941Siah1aacacuggccgugguuAGACUUau |||||| acauuguaaaauauuUCUGAAcu39255277[rn4:19:21739945-21739967:+]0.66601200-7.04-0.1688
MIMAT0005289rno-miR-881140941Siah1aagAUAAGUCU---UUACGGUGUCAa ||||:| | ||| | ||||| uaUAUUUAAAAAUAAUUCAACAGUa221175199[rn4:19:21739865-21739889:+]0.66601310-9.39-0.1198
MIMAT0005289rno-miR-881140941Siah1aagauaagucuuuacgGUGUCAa |||||| gagugcaucaucauaCACAGUa28934955[rn4:19:21740624-21740645:+]0.54151206-9.69-0.1603
MIMAT0005290rno-miR-883140941Siah1auaugacucucuacaaCGUCAAu |||||| uguuuuuaaaaaaagGCAGUUu28978999[rn4:19:21740668-21740689:+]0.64421206-7.75-0.1468
MIMAT0005322rno-miR-532-5p140941Siah1auguCAGGAUGUGAGUUCCGUac ||::| | |||||| uuuGUUUUUAAAAAAAGGCAgu320976997[rn4:19:21740666-21740687:+]0.64421270-10.88-0.1827
MIMAT0005330rno-miR-674-3p140941Siah1aaacaagacucuacccUCGACAc |||||| guaaauaaaaagaaaAGCUGUu28120141[rn4:19:21739810-21739831:+]0.66601206-7.74-0.2066
MIMAT0005332rno-miR-708*140941Siah1agaucuUCGAGUGUCAGAUCAAc | :|: :| ||||||| uugcuAAUUUUUAUUCUAGUUu218492513[rn4:19:21740182-21740203:+]0.57731497-9.22-1.2570
MIMAT0005334rno-miR-743a140941Siah1aagAUGG---GUCAAACCGCAGAAAg |||| :| || |||||||| ugUACCUUUUAAGUUAGCGUCUUUu221566590[rn4:19:21740256-21740280:+]0.64121557-19.00-0.9997
MIMAT0005334rno-miR-743a140941Siah1aagauggguCAAACCGCAGAAAg |||| |||||| aaaaaaauGUUUUUGGUCUUUu21510021023[rn4:19:21740692-21740713:+]0.64421226-8.58-0.2369
MIMAT0012823rno-miR-490140941Siah1agucguaccuCAGGAGGUCCAAc || |:|||||| uucuuuucuGUAAUUCAGGUUu214534555[rn4:19:21740224-21740245:+]0.64121336-11.66-0.1190
MIMAT0012824rno-miR-513140941Siah1auacuuucuGUGGAA---GAACACUu |:|:|| ||||||| ugggccacCGCUUUCCCCUUGUGAg215397421[rn4:19:21740087-21740111:+]0.66601457-16.19-0.2163
MIMAT0012829rno-miR-511140941Siah1aacuCACGUCUCGUUUUCCGUa || : | |||||||| uuuGUUUUUAAAAAAAGGCAg219976996[rn4:19:21740666-21740686:+]0.64421467-9.51-1.1639
MIMAT0012831rno-miR-544140941Siah1acucgAACGAUUUUUAC-GUCUUa ||||| |||| ||||| auaaUUGCU--UAAUGUCAGAAg219599619[rn4:19:21740289-21740309:+]0.64121230-13.43-0.9183
MIMAT0012838rno-miR-653140941Siah1agucAUCUCUUACAAAGUUGUg || | ||| ||||||| auuUA-AAAAUAAUUCAACAg219178197[rn4:19:21739868-21739887:+]0.66601527-6.62-1.2250
MIMAT0012844rno-miR-665140941Siah1aucccUGGAGUCG--GAGGACCa |||| | | ||||||| gccaACCUAAACCUCUCCUGGu2177798[rn4:19:21739767-21739788:+]0.66601517-21.65-0.4921
MIMAT0012849rno-miR-295140941Siah1acuucacacgggGUGUAAACUca :| |||||| uuuucauuaaaUAAAUUUGAcu312512533[rn4:19:21740202-21740223:+]0.60921230-4.31-0.2168
MIMAT0012860rno-miR-496140941Siah1acucuAACCGG--UACAUUAUGAGu ||||:| | |||| ||| guuuUUGGUCUUUUAUAAUUCUCa21910101033[rn4:19:21740700-21740723:+]0.64421250-12.69-0.1376
MIMAT0001619rno-miR-322140941Siah1aagguuUUGUACUUAACGACGAc |||| | ||||||| gagucAACACACAGUGCUGCUg218419440[rn4:19:21740109-21740130:+]0.66601537-19.70-0.3010
MIMAT0000566rno-miR-329140941Siah1auuuuuccAAUCGACCCACACAa ||:| |||||||| caauuuuUUGG--GGGUGUGUg216310329[rn4:19:21740000-21740019:+]0.66601487-14.80-0.2899
MIMAT0000566rno-miR-329140941Siah1auuuuucCAAUCGACCCACACAa ||| :| ||||||| uguuuuGUU-UUUUGGUGUGUg217466486[rn4:19:21740156-21740176:+]0.57731467-14.69-1.1766
MIMAT0000573rno-miR-140140941Siah1agauGGUAUCCCAUUUUGGUGAc :|| | || |||||||| aauUCA-ACAGU-AAACCACUg220188207[rn4:19:21739878-21739897:+]0.66601477-16.68-1.2248
MIMAT0004650rno-miR-340-5p140941Siah1auuagucAGAGUAACGAAAUAUu |:|:: | :|||||| aaauguUUUUGGUCUUUUAUAa21710061027[rn4:19:21740696-21740717:+]0.64421366-6.35-0.1625
MIMAT0000600rno-miR-129140941Siah1acgUUCGGGUCUGGCGUUUUUc ||| ||| ::||||||| aaAAG-GCAGUUUGCAAAAAa2209881007[rn4:19:21740678-21740697:+]0.64421577-13.52-1.2723
MIMAT0000602rno-miR-20a140941Siah1agaUGGACGUGAUAUUCGU-GAAAu ||| || ||::||| |||| auACC--CAAGAUGGGCAUCUUUu222218239[rn4:19:21739908-21739929:+]0.66601220-15.67-0.7352
MIMAT0000611rno-miR-135b140941Siah1aaguguauccUUACUUUUCGGUAu | ||| ||||||| uuuccuuuaACUGACAAGCCAUc215364386[rn4:19:21740054-21740076:+]0.66601547-10.45-0.2216
MIMAT0000784rno-miR-15b140941Siah1aacAUUUGGUACU---ACACGACGAu |:|::|| | |||||||| ugUGAGUCAACACACAGUGCUGCUg221416440[rn4:19:21740106-21740130:+]0.66601477-21.90-0.3062
MIMAT0000785rno-miR-16140941Siah1agcGGUUAUAAAUGCACGACGAu :||| | | |||||||| agUCAACACACA-GUGCUGCUg221420440[rn4:19:21740110-21740130:+]0.66601507-20.29-0.3114
MIMAT0000788rno-miR-19b140941Siah1aagucaaaacguaccUAAACGUgu :|||||| uuuaaaaaaaggcaGUUUGCAaa3109821004[rn4:19:21740672-21740694:+]0.64421210-8.55-0.1310
MIMAT0000789rno-miR-19a140941Siah1aagucaaaacguaucUAAACGUgu :|||||| uuuaaaaaaaggcaGUUUGCAaa3109821004[rn4:19:21740672-21740694:+]0.64421210-8.55-0.1310
MIMAT0000804rno-miR-30c140941Siah1acgacucucacauccUACAAAUgu :|||||| aauauuucuggccaGUGUUUAaa3101234[rn4:19:21739702-21739724:+]0.66601210-8.66-0.2616
MIMAT0000805rno-miR-30e140941Siah1agaAGGUCAGUUCCUACAAAUgu |:| | | || |||||| auUUCUGGCCAG--UGUUUAaa3211534[rn4:19:21739705-21739724:+]0.66601290-12.37-0.2420
MIMAT0000806rno-miR-30b-5p140941Siah1aucgacucacauccUACAAAUgu :|||||| auauuucuggccaGUGUUUAaa3101334[rn4:19:21739703-21739724:+]0.66601210-7.63-0.2616
MIMAT0000807rno-miR-30d140941Siah1agaAGGUCAGCCCCUACAAAUgu ||::| | | |||||| uuUCUGGCCAG---UGUUUAaa3211634[rn4:19:21739706-21739724:+]0.66601240-9.72-0.2442
MIMAT0000808rno-miR-30a140941Siah1agaAGGUCAGCUCCUACAAAUgu |:| | | || |||||| auUUCUGGCCAG--UGUUUAaa3211534[rn4:19:21739705-21739724:+]0.66601290-10.62-0.2442
MIMAT0000824rno-miR-103140941Siah1aagUAUCGGGACAUGU-UACG-ACGa :|: |: || ||: |||| ||| guGUGUCUGUGCACGCAUGCGUGCa222325349[rn4:19:21740015-21740039:+]0.66601200-16.91-0.2528
MIMAT0000826rno-miR-107140941Siah1aacUAUCGGGACAUGU-UACG-ACGa :|: |: || ||: |||| ||| guGUGUCUGUGCACGCAUGCGUGCa222325349[rn4:19:21740015-21740039:+]0.66601200-16.91-0.2528
MIMAT0000841rno-miR-135a140941Siah1aaguguauccUUAUUUUUCGGUAu | |:| ||||||| uuuccuuuaACUGACAAGCCAUc215364386[rn4:19:21740054-21740076:+]0.66601507-7.98-0.2216
MIMAT0000843rno-miR-137140941Siah1agauGCGCAUAAGAAUUCGUU-AUu ||: | || |||||| || gcuCGUCGAGGCUGAAGCAAGUAc221726749[rn4:19:21740416-21740439:+]0.54151200-12.89-0.1969
MIMAT0000846rno-miR-141140941Siah1aggUAGAAAUGGUCUGUCACAAu || ||| |::| ||||||| aaAUAUUU-CUGGCCAGUGUUu2211131[rn4:19:21739701-21739721:+]0.66601627-14.51-1.3425
MIMAT0000848rno-miR-142-3p140941Siah1aagguauUUCAUCCUUUGUGAUgu | ||| | ||||||| aguugcAUGUA-GUAACACUAau318154175[rn4:19:21739844-21739865:+]0.66601350-13.42-0.1997
MIMAT0000868rno-miR-193140941Siah1augacccugAAACAUCCGGUCAa ||| | ||||||| aucaaauaUUUCU-GGCCAGUg215828[rn4:19:21739698-21739718:+]0.66601487-12.29-0.9324
MIMAT0000870rno-miR-195140941Siah1acgGUUAUAAAGACACGACGAu ||| | | |||||||| guCAACA-CACAGUGCUGCUg220421440[rn4:19:21740111-21740130:+]0.66601497-17.40-0.3114
MIMAT0000873rno-miR-200c140941Siah1aggUAGUAAUGGGCCGUCAUAAu ||||| |: | ||||||| gcAUCAUCAUAC-ACAGUAUUu221938958[rn4:19:21740628-21740648:+]0.54151587-16.67-1.0205
MIMAT0000873rno-miR-200c140941Siah1aggUAGUAAUGGGCCGUCAUAAu | :||| |: | ||||:|| caAAUAUUUCUGGCCAGUGUUu2211031[rn4:19:21739700-21739721:+]0.66601440-16.56-0.1484
MIMAT0000874rno-miR-200a140941Siah1auguagcAAUGGUCUGUCACAAu || |::| ||||||| caaauaUUUCUGGCCAGUGUUu2171031[rn4:19:21739700-21739721:+]0.66601567-14.43-1.3425
MIMAT0000875rno-miR-200b140941Siah1acaGUAGUAAUGGUCCGUCAUAAu |||||| | :| ||||||| ugCAUCAUCA-UACACAGUAUUu222937958[rn4:19:21740627-21740648:+]0.54151637-16.83-1.0205
MIMAT0000875rno-miR-200b140941Siah1acagUAGUAAUGGUCCGUCAUAAu | :||| |::| ||||:|| ucaAAUAUUUCUGGCCAGUGUUu221931[rn4:19:21739699-21739721:+]0.66601480-14.05-0.1484
MIMAT0000878rno-miR-205140941Siah1agucugaggCCACCU-UACUUCCu | | || ||||||| agguagaaGCUAGACAUGAAGGu21599121[rn4:19:21739789-21739811:+]0.66601457-14.88-1.0010
MIMAT0000892rno-miR-223140941Siah1accCCAUAAACUGUUUGACUGu ||| || : ||||||| uuGGUUUUCCUUUAACUGACa220359379[rn4:19:21740049-21740069:+]0.66601517-14.28-0.8733
MIMAT0001538rno-miR-429140941Siah1augcCGUAAUGG--UCUGUCAUAAu |||| |:| | |||||||| aguGCAUCAUCAUACACAGUAUUu220935958[rn4:19:21740625-21740648:+]0.54151627-16.16-1.0205
MIMAT0001538rno-miR-429140941Siah1augccGUAAUGGUCUGUCAUAAu :||| |::| ||||:|| caaaUAUUUCUGGCCAGUGUUu2191031[rn4:19:21739700-21739721:+]0.66601460-13.77-0.1484
MIMAT0003114rno-miR-383140941Siah1aucggugUCAGUGGAAGACUAGa ||| | | ||||||| uuagggAGUAAAC-UCUGAUCa217817837[rn4:19:21740507-21740527:+]0.54151507-12.84-0.7701
MIMAT0003118rno-miR-215140941Siah1acaGACAG--UUUAGUA-UCCAGUa ||||| | : |:| |||||| ugCUGUCCUACGCCGUCAGGUCAg220771794[rn4:19:21740461-21740484:+]0.54151226-18.04-0.1273
MIMAT0003119rno-miR-224140941Siah1aauuugccuuggugaucACUGAAc |||||| uuucauuaaauaaauuUGACUUu28513535[rn4:19:21740203-21740225:+]0.60921206-6.53-0.2021
MIMAT0003123rno-miR-377140941Siah1agguuuuCAACGGA-AACACACua ||| ::| |||||| uguuuuGUUUUUUGGUGUGUGug317466488[rn4:19:21740156-21740178:+]0.57731270-11.12-0.1051
MIMAT0003176rno-miR-539140941Siah1augUGUGGU-UCCUAUUAAAGAgg |||::: | || |||||| aaACAUUGUAAAAU-AUUUCUga321253274[rn4:19:21739943-21739964:+]0.66601290-6.49-0.2398
MIMAT0003176rno-miR-539140941Siah1augugugguuccuauuAAAGAGg |||||| ucuguaauucagguuUUUCUCa28540561[rn4:19:21740230-21740251:+]0.64121206-10.47-0.1341
MIMAT0003199rno-miR-381140941Siah1acucUCGAACGGGAACAUAu | :| |::||||||| uuaAAUUGGUUCUUGUAUu217899917[rn4:19:21740589-21740607:+]0.54151527-12.49-1.0486
MIMAT0003208rno-miR-374140941Siah1agugaaucguccaacaUAAUAUa |||||| cucugaucacuauaaAUUAUAa28829850[rn4:19:21740519-21740540:+]0.54151206-4.64-0.1530
MIMAT0003211rno-miR-20b-5p140941Siah1auggacGUGAUACUCGU-GAAAc || |||:||| |||| auaccCAAGAUGGGCAUCUUUu217218239[rn4:19:21739908-21739929:+]0.66601240-15.31-0.7352
MIMAT0003383rno-miR-497140941Siah1aauguuUGGUGUCACACGACGAc | |||| |||||||| gagucAACACACAGUGCUGCUg218419440[rn4:19:21740109-21740130:+]0.66601617-23.60-0.2985
MIMAT0005300rno-miR-182140941Siah1agccacacucaAGAUGGUAACGGUUu |||:| ||||||| aaggcacccaUCUGC--UUGCCAAc2166082[rn4:19:21739750-21739772:+]0.66601487-13.03-0.3562
MIMAT0005309rno-miR-384-5p140941Siah1augUAACGGAUCCUUAACAAAUgu ||| :||:| | |||||| auAUU-UCUGGCCAGUGUUUAaa3221334[rn4:19:21739703-21739724:+]0.66601390-11.10-0.2593
MIMAT0005320rno-miR-495140941Siah1auucuucACGUG--GUACAAACAAa || || ::|||||||| uauuucUGAACUUUGUGUUUGUUg217266289[rn4:19:21739956-21739979:+]0.66601517-9.13-1.1100
MIMAT0005320rno-miR-495140941Siah1auucuucacgugguacAAACAAa |||||| aauuaaaguaaaucaUUUGUUu28961982[rn4:19:21740651-21740672:+]0.64421206-11.17-0.2136
MIMAT0005595rno-miR-146b140941Siah1auguCGGAUACCUUAA---GUCAAGAGu |::| ||| || :| ||||| aauGUUUUUGGUCUUUUAUAAUUCUCa22210071033[rn4:19:21740697-21740723:+]0.64421200-12.91-0.1134
DNA & RNA Element - TRANSFAC
AccessionASDescriptionSpeciesEntrezPubmedBinding Info
G010164Siah1Rattus norvegicus140941
DNA & RNA Element - miRNAMap
Gene NameMature miRNATarget StartTarget EndmiRNA 3-5AlignmentTarget 5-3
Siah1; Siah1arno-miR-1*308332CCCAUGUAUU----UCUUCAUACACG- ||| :| ||:||||:---GACAAUUUUUUGGGGGUGUGUGUC
Siah1; Siah1arno-miR-101a417439GAAGUCAAUA--GUGUCAUGACAU | ||| ||||||:|||-GUGAGUCAACACACAGUGCUGC-
Siah1; Siah1arno-miR-101b413439-GAAGUCGAUA----GUGUCAUGACAU ||| | ||||||:|||CCUUGUGAGUCAACACACAGUGCUGC-
Siah1; Siah1arno-miR-103393441-AGUAUC-------------GGGACA----------UGUUACGACGA ||||:| ||:||| |||:|||||||GUCAUGGGCCACCGCUUUCCCCUUGUGAGUCAACACACAGUGCUGCUG
Siah1; Siah1arno-miR-107412441ACUAUCGGGACA----------UGUUACGACGA- ||:||| |||:|||||||-----CCCUUGUGAGUCAACACACAGUGCUGCUG
Siah1; Siah1arno-miR-139426446UCUGUG-CACG-UGACAUCU- |||| |||| :||||:|:-CACACAGUGCUGCUGUGGGG
Siah1; Siah1arno-miR-140*327361-ACAGGCACCAAG--AUGGG-------ACACCAU ||||:||| |:| : ||||||GUGUCUGUGCACGCAUGCGUGCACGUGUGUGGUU
Siah1; Siah1arno-miR-15b415442-ACAUUUGGUACUA---CACGACGAU- |||:|::|| ||||||||:UUGUGAGUCAACACACAGUGCUGCUGU
Siah1; Siah1arno-miR-16420442GCGGUUAUAAAUGCACGACGAU- |:||| ||||||||:AGUCAACACACA-GUGCUGCUGU
Siah1; Siah1arno-miR-195420442-CGGUUAUAAAGACACGACGAU- |:||| ||||||||:AGUCAACACACA-GUGCUGCUGU
Siah1; Siah1arno-miR-20590122GUCUGAGG-CCA-CCU-----------UACUUCCU |||| ||| || |||||||---UCUCCUGGUAGGUAGAAGCUAGACAUGAAGGU
Siah1; Siah1arno-miR-20795121UUCCCUCC-UCU-CGGUCCU--CUUCG || ||| ||| ||:|| ||||-UGGUAGGUAGAAGCUAGACAUGAAGG
Siah1; Siah1arno-miR-210320344AGUCGGCG-ACAG---UGUGCGUGUC :| :|: |||| :||||||:-GGGGUGUGUGUCUGUGCACGCAUG-
Siah1; Siah1arno-miR-216427450-GUGUCAACGGUCGAC--UCUAAU- ||||| |||: |||| :|:||:ACACAG-UGCU-GCUGUGGGGUUGU
Siah1; Siah1arno-miR-217145169UAGGUCA---GUCAAGGACUACGUCAU- ||| ||||| | |||:||||--ACAGGAAACAGUUGC--AUGUAGUAA
Siah1; Siah1arno-miR-297322348GUACGUAU--GUACGUGUGUAUGUA- :||::|: ::|||||:|||:|:|GGUGUGUGUCUGUGCACGCAUGCGUG
Siah1; Siah1arno-miR-324-5p424451-UGUG-GUUACGG-GAU-CCCCUACGC |||| ||:|||: ||: |||| ||:AACACACAGUGCUGCUGUGGGGUUGUU
Siah1; Siah1arno-miR-328387405-UGCCUUCCCGUCUCUCCCGGUC :|| || || ||||||UGCGU--GGUCAU---GGGCCAC
Siah1; Siah1arno-miR-329316330UUUUUCCAAUCGACCCACACAA ||:| ||||||||------UUUGG--GGGUGUGUG
Siah1; Siah1arno-miR-338421445-AGUUGUUUUAGUGACUACGAC-CU- |||||| || || ||||| |:GUCAACACA--CAGUGCUGCUGUGGG
Siah1; Siah1arno-miR-342320337CUGCCCACGCUAAAGACACACUCU |||||:| ||||||--GGGGUGUGUG-UCUGUGC----
Siah1; Siah1arno-miR-347219235ACCCGCUGGGU-CUCCCUGU- ||||| || ||:||-----UACCCAAGAUGGGCAU
Siah1; Siah1arno-miR-363-5p386407UUUAACGUAGCA---CUAGGUGGGC |||:| || | |||||---CUGCGUGGUCAUGGGCCACCG-
Siah1; Siah1arno-miR-377339361GGUUUUCAACGGAAACACACUA- || ||| ||||||:|GCAUGCG-UGCACGUGUGUGGUU
Siah1; Siah1arno-miR-424409442-AGGUUUUGUACUUA----------ACGACGAC- ||| ::|||:| ||||||||UUCCCCU-UGUGAGUCAACACACAGUGCUGCUGU
Siah1; Siah1arno-miR-429132-UGCCGU--------AAUGGUCUGUCAUAAU |||||| || |::| ||||:||AACGGCAAUCAAAUAUUUCUGGCCAGUGUUU
Siah1; Siah1arno-miR-450249267GUAAUCCUUGUGUAGCGUUUUU ||||| ||||:|:||||---AAGGAA-ACAUUGUAAAAU
Siah1; Siah1arno-miR-497395442AUGUUUGGUG---------------UCA---------CACGACGAC |: :|||| ||| |||||||||CAUGGGCCACCGCUUUCCCCUUGUGAGUCAACACACAGUGCUGCUGU
Siah1; Siah1arno-miR-7348370UUGUUU-UAGUGAUCAGAAGGU ||: :| ::|:||:||||CACGUGUGUGGUUGGUUUUCCU
Siah1; Siah1arno-miR-1*309330cccauguauuuCUUCAUACACg |::||:||||acaattttttgGGGGTGTGTGt
Siah1; Siah1arno-miR-101a416439gaAGUCAAU--AGUGUCAUGACau | ||| | ||||||:|||tgTGAGTCAACACACAGTGCTGct
Siah1; Siah1arno-miR-101b420439gaAGUCGAUAGUGUCAUGACau ||| | | ||||||:|||agTCAAC-A-CACAGTGCTGct
Siah1; Siah1arno-miR-103417439aguaucgggacaUGUUACGACGA |||:|||||||gtgagtcaacacACAGTGCTGCT
Siah1; Siah1arno-miR-107416439ACUAUCGG--GACAUGUUACGACGA|| ||:| | |||:|||||||TGTGAGTCAAC-ACACAGTGCTGCT
Siah1; Siah1arno-miR-124a6183aCCGUAAGU-GGCGCACGGaauu |||| || |:|| ||||aGGCACCCATCTGCTTGCCaacc
Siah1; Siah1arno-miR-139425444UCUGUG-CACG-UGACAUCu| |||| |||| :||||:|ACACACAGTGCTGCTGTGGg
Siah1; Siah1arno-miR-140*328360ACAGGCAC---------CAAGAUG-GGACACCAu||||:||| || | || : ||||||TGTCTGTGCACGCATGCGTGC-ACGTGTGTGGTt
Siah1; Siah1arno-miR-15b416440ACAUUUGGUACU---ACACGACGAu|||:|::|| | ||||||||TGTGAGTCAACACACAGTGCTGCTg
Siah1; Siah1arno-miR-16420440gCGGUUAUAAAUG-CACGACGAu |:||| | || ||||||||aGTCAACA--CACAGTGCTGCTg
Siah1; Siah1arno-miR-195421440CGGUUAUAAAGACACGACGAu|:||| | | ||||||||GTCAACA-CACAGTGCTGCTg
Siah1; Siah1arno-miR-20587121gucuGAGG-----CCACCU--------UACUUCCu |||| ||| || |||||||acctCTCCTGGTAGGTAGAAGCTAGACATGAAGGt
Siah1; Siah1arno-miR-20785108uucccuccucuCGGUCC-UCUUCG | :||| ||||||aaacctctcctGGTAGGTAGAAGC
Siah1; Siah1arno-miR-210324344agucggcGACAGUGUGCGUguc |||| :||||||tgtgtgtCTGT-GCACGCAtgc
Siah1; Siah1arno-miR-216428448GUGUCAACGGUCG--ACUCUAAu||||| |||: || ||:|:||CACAG-TGCT-GCTGTGGGGTTg
Siah1; Siah1arno-miR-217143167UAGGUC---AGUCAAGGACUACGUCAU|| ||| ||||| | |||:||||ATACAGGAAACAGTTGC--ATGTAGTA
Siah1; Siah1arno-miR-223357379CC--CCAUAAACUGUUUGACUGU|| ||| || : ||||||||GGTTGGTTTTCCTTTAACTGACA
Siah1; Siah1arno-miR-297324346guACGUAUGUACGUGUGUAUGUA ||::| ::|||||:|||:|:|tgTGTGTCTGTGCACGCATGCGT
Siah1; Siah1arno-miR-324-5p425450UGUG-GUUACGG-GAU-CCCCUACgc|||| ||:|||: ||: |||| ||ACACACAGTGCTGCTGTGGGGTTGtt
Siah1; Siah1arno-miR-328383404ugccuucccgucucuCCCGGUc ||||||catctgcgtggtcatGGGCCAc
Siah1; Siah1arno-miR-329310329uuuuuccAAUCGACCCACACAa ||:| ||||||||caattttTTGG--GGGTGTGTg
Siah1; Siah1arno-miR-329466486uuuuucCAAUCGACCCACACAa ||| :| |||||||tgttttGTT-TTTTGGTGTGTg
Siah1; Siah1arno-miR-338422442AGUUGUUUUAGUGACUACGACcu|||||| | || || |||||TCAACACA--CAGTGCTGCTGtg
Siah1; Siah1arno-miR-342336358cUGCCCACGCUAAAG-ACACACUCu ||| |||| | | ||||| |cACGCATGCG--TGCACGTGTGTGg
Siah1; Siah1arno-miR-342301330cUGCCCAC-GCUAAAGA-----CACACUCu |: | || | ||||:| ||||| |tATTGTTGACAATTTTTTGGGGGTGTGTGt
Siah1; Siah1arno-miR-347214233acccgcUGGG-UCUCCCUGU |||| ||| ||:||atatatACCCAAGATGGGCA
Siah1; Siah1arno-miR-363-5p383407uuuaACG---UAGCACUAGGUGGgc ||| :|| ||: |||||catcTGCGTGGTCATGGGCCACCgc
Siah1; Siah1arno-miR-424421440agGUUUUGUACUUAACGACGAC ||| ||| | ||||||||gtCAACACA--CAGTGCTGCTG
Siah1; Siah1arno-miR-429231UGCCG--------UAAUGGUCUGUCAUAAu||||| ||| |::| ||||:||ACGGCAATCAAATATTTCTGGCCAGTGTTt
Siah1; Siah1arno-miR-450246266guaaUCCUUGUGUAGCGUUUUu ||||| ||||:|:||||agaaAGGAA-ACATTGTAAAAt
Siah1; Siah1arno-miR-497421440auGUUUGGUGUCACACGACGAC ||| |||| |||||||||gtCAA--CACACAGTGCTGCTG
Siah1; Siah1arno-miR-7349369uuguuuuAGUGAUCAGAAGGu | ::|:||:||||acgtgtgTGGTTGGTTTTCCt
Siah1; Siah1arno-miR-15b433440------------------ACAUUUGGUACUA---CACGACGAU |||:| || ||||||||:GGGCCACCGCUUUCCCCUUGUGAGUCAACACACAGUGCUGCUGU
Siah1; Siah1arno-miR-16433440G----------------------CGGUUAUAAAUGCACGACGAU |:||| ||||||||:GGGCCACCGCUUUCCCCUUGUGAGUCAACACACA-GUGCUGCUGU
Siah1; Siah1arno-miR-195433440-----------------------CGGUUAUAAAGACACGACGAU |:||| ||||||||:GGGCCACCGCUUUCCCCUUGUGAGUCAACACACA-GUGCUGCUGU
Siah1; Siah1arno-miR-205114121GUCU--------GAGG-CCA-CCU-----------UACUUCCU |||| ||| || |||||||CAACCUAAACCUCUCCUGGUAGGUAGAAGCUAGACAUGAAGGU
Siah1; Siah1arno-miR-223372379--------------------CC--CCAUAAACUGUUUGACUGU || ||| ||||||||ACGCAUGCGUGCACGUGUGUGGUUGGUUUUCCUUUAACUGACAA
Siah1; Siah1arno-miR-329322329UUUUUCC-----------------------AAUCGACCCACACAA ||:| ||||||||UUGUAGAUUGAUUGUAUUGUUGACAAUUUUUUGG--GGGUGUGUG
Siah1; Siah1arno-miR-329479486UUUUUCCAAUCGAC------------------------------CCACACAA :|:|| |||||||---------GGUUGUUUUUUGUUUUGUUUUUUGUUUUGUUUUUUGGUGUGUG
Siah1; Siah1arno-miR-424433440------------AGGUUUUGUACUUA----------ACGACGAC ||| ::|||:| ||||||||GGGCCACCGCUUUCCCCU-UGUGAGUCAACACACAGUGCUGCUGU
Siah1; Siah1arno-miR-497433440AU-----------------------GUUUGGUGUCACACGACGAC ||| |||| |||||||||GGGCCACCGCUUUCCCCUUGUGAGUCAACACACA--GUGCUGCUGU
DNA & RNA Element - RAID2
Gene NameRAID IDInteractor 1Category 1ID 1Interactor 2Category 2ID 2MethodsScore
Siah1RAID00180569rno-miR-299b-5pmiRNAMIMAT0017833Siah1mRNA140941Prediction0.1828
Siah1RAID00181804rno-miR-223-3pmiRNAMIMAT0000892Siah1mRNA140941Prediction0.2202
Siah1RAID00201646rno-miR-137-3pmiRNAMIMAT0000843Siah1mRNA140941Prediction0.1828
Siah1RAID00248399rno-miR-6216miRNAMIMAT0024856Siah1mRNA140941Prediction0.1828
Siah1RAID00281722rno-miR-32-3pmiRNAMIMAT0017103Siah1mRNA140941Prediction0.1828
Siah1RAID00379973rno-miR-742-5pmiRNAMIMAT0017314Siah1mRNA140941Prediction0.1828
Siah1RAID00423508rno-miR-141-3pmiRNAMIMAT0000846Siah1mRNA140941Prediction0.2202
Siah1RAID00535599rno-miR-300-5pmiRNAMIMAT0004743Siah1mRNA140941Prediction0.1828
Siah1RAID00619712rno-miR-129-5pmiRNAMIMAT0000600Siah1mRNA140941Prediction0.2202
Siah1RAID00709073rno-miR-215miRNAMIMAT0003118Siah1mRNA140941Prediction0.1828
Siah1RAID00714251rno-miR-20a-5pmiRNAMIMAT0000602Siah1mRNA140941Prediction0.1828
Siah1RAID00763686rno-miR-142-3pmiRNAMIMAT0000848Siah1mRNA140941Prediction0.1828
Siah1RAID00814326rno-miR-539-3pmiRNAMIMAT0017212Siah1mRNA140941Prediction0.1828
Siah1RAID00843131rno-miR-3084b-5pmiRNAMIMAT0035741Siah1mRNA140941Prediction0.1828
Siah1RAID00913336rno-miR-107-3pmiRNAMIMAT0000826Siah1mRNA140941Prediction0.1828
Siah1RAID01040254rno-miR-30a-3pmiRNAMIMAT0000809Siah1mRNA140941Prediction0.1828
Siah1RAID01071331rno-miR-384-5pmiRNAMIMAT0005309Siah1mRNA140941Prediction0.1828
Siah1RAID01160548rno-miR-140-5pmiRNAMIMAT0000573Siah1mRNA140941Prediction0.2202
Siah1RAID01170774rno-miR-3084c-5pmiRNAMIMAT0035743Siah1mRNA140941Prediction0.1828
Siah1RAID01175515rno-miR-200a-3pmiRNAMIMAT0000874Siah1mRNA140941Prediction0.2202
Siah1RAID01183658rno-miR-20b-5pmiRNAMIMAT0003211Siah1mRNA140941Prediction0.1828
Siah1RAID01199358rno-miR-329-3pmiRNAMIMAT0000566Siah1mRNA140941Prediction0.2202
Siah1RAID01267881rno-miR-19b-3pmiRNAMIMAT0000788Siah1mRNA140941Prediction0.1828
Siah1RAID01313336rno-miR-377-3pmiRNAMIMAT0003123Siah1mRNA140941Prediction0.1828
Siah1RAID01325913rno-miR-452-5pmiRNAMIMAT0035748Siah1mRNA140941Prediction0.1828
Siah1RAID01413826rno-miR-340-5pmiRNAMIMAT0004650Siah1mRNA140941Prediction0.2202
Siah1RAID01417105rno-miR-183-3pmiRNAMIMAT0017141Siah1mRNA140941Prediction0.1828
Siah1RAID01494678rno-miR-195-5pmiRNAMIMAT0000870Siah1mRNA140941Prediction0.2202
Siah1RAID01562322rno-miR-362-3pmiRNAMIMAT0017357Siah1mRNA140941Prediction0.1828
Siah1RAID01586561rno-miR-135a-5pmiRNAMIMAT0000841Siah1mRNA140941Prediction0.2202
Siah1RAID01620385rno-miR-193b-3pmiRNAMIMAT0035734Siah1mRNA140941Prediction0.1828
Siah1RAID01660194rno-miR-299a-5pmiRNAMIMAT0000901Siah1mRNA140941Prediction0.1828
Siah1RAID01871157rno-miR-429miRNAMIMAT0001538Siah1mRNA140941Prediction0.2381
Siah1RAID01877683rno-miR-15a-5pmiRNAMIMAT0035728Siah1mRNA140941Prediction0.1828
Siah1RAID01946378rno-miR-205miRNAMIMAT0000878Siah1mRNA140941Prediction0.2202
Siah1RAID02109573rno-miR-30d-5pmiRNAMIMAT0000807Siah1mRNA140941Prediction0.1828
Siah1RAID02113568rno-miR-539-5pmiRNAMIMAT0003176Siah1mRNA140941Prediction0.1828
Siah1RAID02272336rno-miR-30e-5pmiRNAMIMAT0000805Siah1mRNA140941Prediction0.1828
Siah1RAID02395500rno-miR-495miRNAMIMAT0005320Siah1mRNA140941Prediction0.1828
Siah1RAID02420567rno-miR-135b-5pmiRNAMIMAT0000611Siah1mRNA140941Prediction0.2202
Siah1RAID02486728rno-miR-322-5pmiRNAMIMAT0001619Siah1mRNA140941Prediction0.2202
Siah1RAID02546863rno-miR-743b-5pmiRNAMIMAT0017288Siah1mRNA140941Prediction0.1828
Siah1RAID02704132rno-miR-141-5pmiRNAMIMAT0017128Siah1mRNA140941Prediction0.1828
Siah1RAID02715232rno-miR-708-3pmiRNAMIMAT0005332Siah1mRNA140941Prediction0.1828
Siah1RAID02926118rno-miR-224-5pmiRNAMIMAT0003119Siah1mRNA140941Prediction0.1828
Siah1RAID02940181rno-miR-383-5pmiRNAMIMAT0003114Siah1mRNA140941Prediction0.1828
Siah1RAID02971273rno-miR-374-5pmiRNAMIMAT0003208Siah1mRNA140941Prediction0.1828
Siah1RAID03092281rno-miR-16-5pmiRNAMIMAT0000785Siah1mRNA140941Prediction0.2202
Siah1RAID03093553rno-miR-19a-3pmiRNAMIMAT0000789Siah1mRNA140941Prediction0.1828
Siah1RAID03244286rno-miR-488-5pmiRNAMIMAT0017320Siah1mRNA140941Prediction0.1828
Siah1RAID03295079rno-miR-193a-3pmiRNAMIMAT0000868Siah1mRNA140941Prediction0.2202
Siah1RAID03432518rno-miR-30a-5pmiRNAMIMAT0000808Siah1mRNA140941Prediction0.1828
Siah1RAID03453495rno-miR-15b-5pmiRNAMIMAT0000784Siah1mRNA140941Prediction0.2202
Siah1RAID03466352rno-miR-146b-5pmiRNAMIMAT0005595Siah1mRNA140941Prediction0.1828
Siah1RAID03490682rno-miR-200b-3pmiRNAMIMAT0000875Siah1mRNA140941Prediction0.2381
Siah1RAID03524906rno-miR-741-3pmiRNAMIMAT0017902Siah1mRNA140941Prediction0.1828
Siah1RAID03579606rno-miR-665miRNAMIMAT0012844Siah1mRNA140941Prediction0.1828
Siah1RAID03608632rno-miR-30b-5pmiRNAMIMAT0000806Siah1mRNA140941Prediction0.1828
Siah1RAID03645386rno-miR-200c-3pmiRNAMIMAT0000873Siah1mRNA140941Prediction0.2381
Siah1RAID03676023rno-miR-182miRNAMIMAT0005300Siah1mRNA140941Prediction0.1828
Siah1RAID03768703rno-miR-381-3pmiRNAMIMAT0003199Siah1mRNA140941Prediction0.2202
Siah1RAID03774563rno-miR-30c-5pmiRNAMIMAT0000804Siah1mRNA140941Prediction0.1828
Siah1RAID03867079rno-miR-30d-3pmiRNAMIMAT0004722Siah1mRNA140941Prediction0.1828
Siah1RAID03878967rno-miR-103-3pmiRNAMIMAT0000824Siah1mRNA140941Prediction0.1828
Siah1RAID03893809rno-miR-497-5pmiRNAMIMAT0003383Siah1mRNA140941Prediction0.2202
Siah1RAID03999483rno-miR-30e-3pmiRNAMIMAT0004720Siah1mRNA140941Prediction0.1828
Siah1RAID04033565rno-miR-126bmiRNAMIMAT0017843Siah1mRNA140941Prediction0.1828