DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004645 rno-miR-148b-5p 81921 Sh3gl3 ggacucacauauuGUCUUGAag ||||||| uuggaccugacuuCAGAACUga 3 10 10 31 [rn4:1:138529014-138529035:+] 0.5986 125 0 -15.25 -0.1740 MIMAT0004645 rno-miR-148b-5p 81921 Sh3gl3 ggacucacauauuGUCUUGAag ||||||| uuggaccugacuuCAGAACUga 3 10 10 31 [rn4:1:138529014-138529035:+] 0.5986 125 0 -15.25 -0.2779 MIMAT0004720 rno-miR-30e* 81921 Sh3gl3 cgacauUUGUAGGC-UGACUUUc :|| || | ||||||| ggaccuGACUUCAGAACUGAAAu 2 17 12 34 [rn4:1:138529016-138529038:+] 0.5986 151 7 -10.64 -0.4044 MIMAT0004720 rno-miR-30e* 81921 Sh3gl3 cgacauUUGUAGGC-UGACUUUc :|| || | ||||||| ggaccuGACUUCAGAACUGAAAu 2 17 12 34 [rn4:1:138529016-138529038:+] 0.5986 151 7 -10.64 -0.9449 MIMAT0004722 rno-miR-30d* 81921 Sh3gl3 cgUCGUUUGUAGAC-UGACUUUc | | :|| || | ||||||| ggACCUGACUUCAGAACUGAAAu 2 21 12 34 [rn4:1:138529016-138529038:+] 0.5986 155 7 -10.73 -0.4044 MIMAT0004722 rno-miR-30d* 81921 Sh3gl3 cgUCGUUUGUAGAC-UGACUUUc | | :|| || | ||||||| ggACCUGACUUCAGAACUGAAAu 2 21 12 34 [rn4:1:138529016-138529038:+] 0.5986 155 7 -10.73 -0.9449 MIMAT0000809 rno-miR-30a* 81921 Sh3gl3 cgacGUUUGUAGGC-UGACUUUc | :|| || | ||||||| ggacCUGACUUCAGAACUGAAAu 2 19 12 34 [rn4:1:138529016-138529038:+] 0.5986 153 7 -11.04 -0.4044 MIMAT0000809 rno-miR-30a* 81921 Sh3gl3 cgacGUUUGUAGGC-UGACUUUc | :|| || | ||||||| ggacCUGACUUCAGAACUGAAAu 2 19 12 34 [rn4:1:138529016-138529038:+] 0.5986 153 7 -11.04 -0.9449 MIMAT0003382 rno-miR-664 81921 Sh3gl3 auccgaccccucaUUUACUUAu |||||||| gacuucagaacugAAAUGAAUu 2 10 18 39 [rn4:1:138529022-138529043:+] 0.5986 145 7 -7.89 -0.3360 MIMAT0003382 rno-miR-664 81921 Sh3gl3 auccgaccccucaUUUACUUAu |||||||| gacuucagaacugAAAUGAAUu 2 10 18 39 [rn4:1:138529022-138529043:+] 0.5986 145 7 -7.89 -0.3435 MIMAT0005280 rno-miR-743b 81921 Sh3gl3 agauaagucaUACCACAGAAAg || |||||||| ----------AU-GUGUCUUUu 2 13 1 11 [rn4:1:138529005-138529015:+] 0.5986 146 7 -10.12 -0.2946 MIMAT0005280 rno-miR-743b 81921 Sh3gl3 agauaagucaUACCACAGAAAg || |||||||| ----------AU-GUGUCUUUu 2 13 1 11 [rn4:1:138529005-138529015:+] 0.5986 146 7 -10.12 -0.5405 MIMAT0000846 rno-miR-141 81921 Sh3gl3 gguagaAAUGGUCUGUCACAAu ||: || ||||||| aaugaaUUGGCA-CCAGUGUUc 2 17 32 52 [rn4:1:138529036-138529056:+] 0.5986 146 7 -10.98 -0.3209 MIMAT0000846 rno-miR-141 81921 Sh3gl3 gguagaAAUGGUCUGUCACAAu ||: || ||||||| aaugaaUUGGCA-CCAGUGUU- 2 17 32 51 [rn4:1:138529036-138529055:+] 0.5986 146 7 -10.63 -1.0402 MIMAT0000874 rno-miR-200a 81921 Sh3gl3 uguagcAAUGGUCUGUCACAAu ||: || ||||||| aaugaaUUGGCA-CCAGUGUUc 2 17 32 52 [rn4:1:138529036-138529056:+] 0.5986 146 7 -11.54 -0.3209 MIMAT0000874 rno-miR-200a 81921 Sh3gl3 uguagcAAUGGUCUGUCACAAu ||: || ||||||| aaugaaUUGGCA-CCAGUGUU- 2 17 32 51 [rn4:1:138529036-138529055:+] 0.5986 146 7 -11.19 -1.0402

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G014243 Sh3gl3 Rattus norvegicus 81921

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Sh3gl3 RAID02461611 rno-miR-141-3p miRNA MIMAT0000846 Sh3gl3 mRNA 81921 Prediction 0.1828 Sh3gl3 RAID03180086 rno-miR-200a-3p miRNA MIMAT0000874 Sh3gl3 mRNA 81921 Prediction 0.1828