DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G037352 Hdac4 Rattus norvegicus 363287 24714615 0 0 R64024; RAT$HDAC4_01; Binding factors: rno-miR-9a-5p

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Hdac4 rno-let-7e 65 85 UGAUAUGU---UGGAGGAUGGAGU || :| ||||:|||: ----CACUCCUGCGUCCUGCCUUG Hdac4 rno-miR-124a 38 87 ACCGU-------------AAGUGGCGCA------------ CGGAAUU ||| ||| |||:|| |||||:: AGGCUCAGCCAAGAAACUUUC-CCGUGUCACUCCUGCGUCCUGCCUUGGU Hdac4 rno-miR-125b 255 281 AGUGUU---CAAUCCCAGA--GUCCCU |||| | |:||||| |||| GCACACGCUGCUGGGGUCCCCCAGGA- Hdac4 rno-miR-127 248 275 -UCGGUUCGAGUCUG-----CCUAGGCU |||||||| || :| ||:||| AAGCCAAGCACACGCUGCUGGGGUCCC- Hdac4 rno-miR-129 224 252 UCGUUCGG--GUC----UGGCGUUUUUC |: || ||| :|||||:||: CGUGGGCACACAGACAUGCCGCAGAAGC Hdac4 rno-miR-133a 107 158 -UGUCGACCAA-------------CUUCC---------------CCUGGUU ||||| ||| |:||| |||||| GACAGCAGGUGUGAAGCAGCAACGGGAGGCCUUUCUGCCGCCCUGGACCAC Hdac4 rno-miR-133b 109 158 AUCGACCAA-------------CUUCC---------------CCUGGUU ||| ||| |:||| |||||| CAGCAGGUGUGAAGCAGCAACGGGAGGCCUUUCUGCCGCCCUGGACCAC Hdac4 rno-miR-135a 221 255 AGUGUAUCCU--------UAU----UUUUCGGUAU |||:|:|| ||: |:|||||| ACACGUGGGCACACAGACAUGCCGCAGAAGCCAA- Hdac4 rno-miR-135b 257 288 -GUGU----AUCCUUA-----CUUUUCGGUAU |||: |:||: |:||||||| ACACGCUGCUGGGGUCCCCCAGGAAAGCCAC- Hdac4 rno-miR-138 172 188 CUAAGUG-UUGUGGUCGA- ||| |||||||| | ---ACACGAACACCAGGUG Hdac4 rno-miR-140 261 289 -GAUGGUAUCCCA--------UUUUGGUGA ||:|: :|||| |||:|||| GCUGCU--GGGGUCCCCCAGGAAAGCCACG Hdac4 rno-miR-140* 58 89 ACAGGCAC----------CAAGAUGGGACACCAU- ||||| || ||:||: ||||: --CCCGUGUCACUCCUGCGUCCUGCCU--UGGUGC Hdac4 rno-miR-145 129 156 UUCCCU----AAGGACCCUUUUGACCUG- |||| ||:||| |||||| -CGGGAGGCCUUUCUGCCGCC-CUGGACC Hdac4 rno-miR-151 143 167 -GGAGUU-CCUCGGAG-UCAGAUCA || ||| || :||||:| GCCGCCCUGGA-CCACAGGUCUGGA Hdac4 rno-miR-15b 247 269 ACAUUUGGUACUACA-CGACGAU- ||:||| ||||||: --GAAGCCAAGCACACGCUGCUGG Hdac4 rno-miR-16 249 269 GCGGUUAUAAAUGCACGACGAU- ||||| || ||||||: AGCCAAGC---ACACGCUGCUGG Hdac4 rno-miR-184 57 79 UGGGAAUAGUCAAGAGGCAGGU ||| |:||| || ||||| UCCCGUGUCACUCCUGCGUCCU Hdac4 rno-miR-185 4 22 CUUGACGGAAAGAGAGGU |:||||: |||||||| AAGCUGCUGUUCUCUCCU Hdac4 rno-miR-187 213 234 GC-CGACGUUGUGU-UCUGUGCU | || |||||||: :|:||| AGUGC-GCAACACGUGGGCACA- Hdac4 rno-miR-189 197 234 UGACUAUA----GUCGAGUCA-----------UCCGUG- |||: ||| |||| :||||| --AGAUGGAACACAGGACAGUGCGCAACACGUGGGCACA Hdac4 rno-miR-195 249 269 -CGGUUAUAAAGACACGACGAU- ||||| ||||||: AGCCAAGCACAC---GCUGCUGG Hdac4 rno-miR-199a 105 134 -CUUGUCCAUCAGACU----UGUGACCC- |:|||| :|| ||| :|| ||| GGGACAGCAGGUGUGAAGCAGCAACGGGA Hdac4 rno-miR-200a 199 218 UGUAGCAAUGG--UCUGUCACAAU :| || :||||||| ---AUGGAACACAGGACAGUGC-- Hdac4 rno-miR-203 391 411 GAUCACCAGGAUUUGUAAAGUG- |||| || ||||||| |: ---CUGGUGCUUAACAUUUGAUU Hdac4 rno-miR-207 266 301 UUCCC------UCCUCUCGG----UCCU-CUUCG- :||| |||| |||| |||| ||||| UGGGGUCCCCCAGGAAAGCCACGAAGGAAGAAGCU Hdac4 rno-miR-20b* 244 269 -GUCUUCA---CGAGUGUGACGUCA |||||| || |||:|||| | GCAGAAGCCAAGCACACGCUGCUGG Hdac4 rno-miR-210 139 176 -AGUCGGCGA-----------CAGUGU---GCGUGUC || ||||| ||| : |||||| UUCUGCCGCCCUGGACCACAGGUCUGGAGACGCACAC Hdac4 rno-miR-211 96 136 -UC-CGUUUCCU--------ACUGUUU-------CCCUU- || ||:||||: || ||: ||||: GAGUGCGAAGGGACAGCAGGUGUGAAGCAGCAACGGGAGG Hdac4 rno-miR-218 236 261 -UGUACCAA-UCUA--GUUCGUGUU ||||| ||| |||||||| GACAUGCCGCAGAAGCCAAGCACAC Hdac4 rno-miR-22* 294 317 -UUUCGAACGGUGACUU-CUUGA :|||||||: :| |::| AGAAGCUUGUGGCAACUUGGGCA Hdac4 rno-miR-221 150 193 CUUUGGG--UCG----UCUGU--------------UACAUCGA ::||| :|: ||||: :|||:|| UGGACCACAGGUCUGGAGACGCACACGAACACCAGGUGUGGCA Hdac4 rno-miR-222 150 193 CUCUGG-GUCA-----UC-------------GGUCUACAUCGA :|||| ||| || ||||:|||:|| UGGACCACAGGUCUGGAGACGCACACGAACACCAGGUGUGGCA Hdac4 rno-miR-292-3p 169 194 -UGUGAGUUU-UGGACCG--CCGUGAA :||| |:|| ||| ||: |||| CGCACACGAACACCAGGUGUGGCAG-- Hdac4 rno-miR-296 110 141 -UGUCCUAACUCC-------CCC-CCGGGA- :|||| ||| ||| ||||:| AGCAGGUGUGAAGCAGCAACGGGAGGCCUUU Hdac4 rno-miR-297 213 242 GUACGUA---UGUA--CGUGUGUAUGUA- :|||: ||:| ||||||| |||| AGUGCGCAACACGUGGGCACACAGACAUG Hdac4 rno-miR-298 2 28 CCUUCU-UGUC--GGGAGGAGACGG- |||| :| |:|||||:||:| CGAAGCUGCUGUUCUCUCCUUUGUCU Hdac4 rno-miR-29b 373 400 -UUGU---GACUAAAGUUUACCACGAU |||| :||||| || ||||||| GAACAAACUUGAUUAAAACUGGUGCUU Hdac4 rno-miR-29c 380 400 UGGCUAAAGUUUACCACGAU ::|||| || ||||||| CUUGAUUAAAACUGGUGCUU Hdac4 rno-miR-325 230 271 -UGUGAAUG-AC------------UCGUG---GAUGAUCC |||| || || ||||| ||:||:|| CACACAGACAUGCCGCAGAAGCCAAGCACACGCUGCUGGGG Hdac4 rno-miR-329 101 121 UUUUUCCAAUCGACCCACACAA :||:|| ||| |||||| CGAAGGGACAGCA-GGUGUGA- Hdac4 rno-miR-33 197 221 GUUACGUUGA----UGUUACGUG- :||| ||| |||:|||:| AGAUGGAACACAGGACAGUGCGCA Hdac4 rno-miR-330 66 103 AGA-GACGUC---CGGGA-CACGAA--------ACG- || ||||: |||:| ||||| ||| ACUCCUGCGUCCUGCCUUGGUGCUCUCUCUGAGUGCG Hdac4 rno-miR-331 264 286 AAGAUCCUAUCCGGGUCCC--CG- ||:||:| |||||| || -GCUGGGGUCC-CCCAGGAAAGCC Hdac4 rno-miR-339 145 162 ACUCGAGGACCUCCUGUCCCU || |||||| ||||| --CGC-CCUGGACCACAGGU- Hdac4 rno-miR-342 83 105 CUGCCCACGCUAAAGACACACUCU- ||||| | |||| ||| || ---UGGUGCUCUCUCUGAGUGCGAA Hdac4 rno-miR-344 173 199 -UGCCA---GUCCGAAACCGAUCUAGU- ||| ||||: |||| |||||| CACGAACACCAGGUG-UGGC-AGAUCAG Hdac4 rno-miR-346 293 320 -UCUCCGU---CCG-UGAGUCCGUCUGU ||| || ||| |||::|||||| AAGAAGCUUGUGGCAACUUGGGCAGAG- Hdac4 rno-miR-351 257 281 -GUCCGAGUUUCCCGAGGAGUCCCU || ||| :|||: || |||| ACACGCUGCUGGGGUCCCCCAGGA- Hdac4 rno-miR-370 133 163 -UUGGUCCAA-GGUGGGGUC----GUCCG- ::|| ||:|||::| ||||: AGGCCUUUCUGCCGCCCUGGACCACAGGUC Hdac4 rno-miR-378 124 169 -UG-UGUCCU--------------GGACCU------CAGUCCUC :| ||:||| |||||| ||| |||| AGCAACGGGAGGCCUUUCUGCCGCCCUGGACCACAGGUCUGGAGA Hdac4 rno-miR-412 127 169 -UGCCGAUC--------------ACCUGG--UCCA--CUUCA |||| :| |||||| |||| |:|| AACGGGAGGCCUUUCUGCCGCCCUGGACCACAGGUCUGGAGA Hdac4 rno-miR-424 308 332 AGGUUUUGUACUUAACGACG--AC- |: :::|| ||:|||||| || ACUUGGGCA-GAGUUGCUGAAUUGA Hdac4 rno-miR-450 195 223 -GUAAUCCUUGUGUA-------GCGUUUUU || |||||||| ||||| UCAGAUGGAACACAGGACAGUGCGCAAC-- Hdac4 rno-miR-483 110 169 -UGUUC------------UGCCCUCC---------------CCU----------CCUCACU :||:| |||||||| ||| |||| AGCAGGUGUGAAGCAGCAACGGGAGGCCUUUCUGCCGCCCUGGACCACAGGUCUGGAGA-- Hdac4 rno-miR-485 28 49 CUUAAG-UAGUG--CCG-GUCGGAGA || :|| ||| ||||| ---GUCUGUCUUAAGGCUCAGCCA-- Hdac4 rno-miR-497 236 269 AUGUUUGGUGUCACA----------CGACGAC- ||| :||:||| ||||||| GACAUGCCGCAGAAGCCAAGCACACGCUGCUGG Hdac4 rno-miR-501 270 295 AAAGUGGGUCCC-----UGUUUCCUAA || |||||| ||:||||| -GUCCCCCAGGAAAGCCACGAAGGAA- Hdac4 rno-miR-542-5p 259 280 -GCACUGUACUACUAGGGGCUC- || :| ||: |:||||| || ACGCUGC-UGG-GGUCCCCCAGG Hdac4 rno-miR-7b 417 437 UUGUUUUAGUGUUCAGAAGGU- |||| |||| |||| ||: CACAAUCCCACA-GUCU-CCGU Hdac4 rno-let-7e 64 84 ugauAUGUUGGAGGAUGGAgu | | :| ||||:||| tcacTCCTGCGTCCTGCCTtg Hdac4 rno-miR-124a 62 85 ACCGUAAGUGGCGC---ACGGAAuu || || || |:||| |||||| TGTCACTC-CTGCGTCCTGCCTTgg Hdac4 rno-miR-125b 255 281 aGUGUUC-A--AUCCCA--GAGUCCcu |||| | | |:|||| | |||| gCACACGCTGCTGGGGTCCCCCAGGaa Hdac4 rno-miR-127 249 275 UCGGUUCGAGUCUG-----CCUAGGcu |||||||| || :| ||:||| AGCCAAGCACACGCTGCTGGGGTCCcc Hdac4 rno-miR-129 228 251 uCGUUCGGGUCU----GGCGUUUUuc ||| | |||| |||||:|| gGCA--CACAGACATGCCGCAGAAgc Hdac4 rno-miR-133a 108 139 UGUCGACCA-ACUUC-------CCCU--GGuu ||||| ||| ||||| |||| || ACAGCAGGTGTGAAGCAGCAACGGGAGGCCtt Hdac4 rno-miR-133a 90 112 ugucGAC-CAACUUCCCCUGguu ||| || :| ||||| ctctCTGAGTGCGAAGGGACagc Hdac4 rno-miR-133b 91 112 aucGAC-CAACUUCCCCUGguu ||| || :| ||||| tctCTGAGTGCGAAGGGACagc Hdac4 rno-miR-135a 229 255 aGUGUAUCCUUAU----UUUUCGGUau |||| || ||: |:|||||| gCACACAGACATGCCGCAGAAGCCAag Hdac4 rno-miR-135b 267 288 guguauccuuaCUUUUCGGUau |:||||||| ggggtcccccaGGAAAGCCAcg Hdac4 rno-miR-138 169 186 cuaaGUG-UUGUGGUCga ||| |||||||| cgcaCACGAACACCAGgt Hdac4 rno-miR-140 421 446 gAUGGUAUC----CCAU-UUUGGUGA | ||| || ||: |||||||| aTCCCACAGTCTCCGTGTAAACCACT Hdac4 rno-miR-140 270 288 gAUGGUAUCCCAUUUUGGUGa | || ||| |||:|||| gTCCCCCAGG--AAAGCCACg Hdac4 rno-miR-140* 56 87 acaGGCAC---CAAGAUG--GGAC---ACCAu ||||| | ||:| |||| |||| ttcCCGTGTCACTCCTGCGTCCTGCCTTGGTg Hdac4 rno-miR-145 103 134 UUCCCUAAGGACC---CUU-----UUGACCUg |||||| | || ||| ||| ||| AAGGGACAGCAGGTGTGAAGCAGCAACGGGAg Hdac4 rno-miR-151 148 166 GGAGUUCCUCGGAG-UCAGAUCa ||| ||| || | :||||:| CCT---GGA-CCACAGGTCTGGa Hdac4 rno-miR-15b 245 267 acaUUUGGUAC-UACACGACGAu ||:||| | | |||||| cagAAGCCAAGCACACGCTGCTg Hdac4 rno-miR-185 3 21 CUU-GACGGAAAGAGAGGu ||| ||||: |||||||| GAAGCTGCTGTTCTCTCCt Hdac4 rno-miR-187 224 242 GCCGACGUUGUGUUCUGUGCu || || |||| |||||:| CGTGGGC-ACAC-AGACATGc Hdac4 rno-miR-187 196 216 GCCGACGUUGUGUUCUGUgcu | | || ||||||:|||| CAGATGGAACACAGGACAgtg Hdac4 rno-miR-189 211 232 UGACUAUAGUCGAGUCAUCCGUG || | || | | ||:||||| ACAGTGCGCAACAC-GTGGGCAC Hdac4 rno-miR-195 247 267 cgguuauaaagacaCGACGAu |||||| gaagccaagcacacGCTGCTg Hdac4 rno-miR-199a 126 153 cUUGUCCAUC----AGAC-UUGUGACCc |||:|| :| |||| :| |||| cAACGGGAGGCCTTTCTGCCGCCCTGGa Hdac4 rno-miR-200a 198 219 uguagcaaUGGUCUGUCACaau || :||||||| gatggaacACAGGACAGTGcgc Hdac4 rno-miR-203 388 409 gaUCACCAGGAUUUGUAAAGUg | |||| || ||||||| | aaACTGGTGCTTAACATTTGAt Hdac4 rno-miR-207 272 299 uucccUCCUCUCGG----UCC-UCUUCG |||| |||| ||| |||||| cccccAGGAAAGCCACGAAGGAAGAAGC Hdac4 rno-miR-20b* 245 268 GUCUUC---ACGAGUGUGACGUCa |||||| || |||:|||| | CAGAAGCCAAGCACACGCTGCTGg Hdac4 rno-miR-210 140 175 AGUCGGC--GAC--AGUG----------UGCGUGUc || |||| ||| ||| ||||||| TCTGCCGCCCTGGACCACAGGTCTGGAGACGCACAc Hdac4 rno-miR-211 104 134 UCC--GUU-UCC-UACU-----GUUUCCCUu ||| ||: ||| :||| ||| |||| AGGGACAGCAGGTGTGAAGCAGCAACGGGAg Hdac4 rno-miR-218 237 260 UGUAC--CAAUCU--AGUUCGUGUu ||||| | ||| |||||||| ACATGCCG-CAGAAGCCAAGCACAc Hdac4 rno-miR-22* 276 299 uUUCGAACGGUG---ACUUCUUga |:| ||||| |||||| cAGGAAAGCCACGAAGGAAGAAgc Hdac4 rno-miR-221 165 192 CUUUGGGU---CGUCUG--UUACAUCGa ||:|| || | | || ::|||:|| GAGACGCACACGAACACCAGGTGTGGCa Hdac4 rno-miR-222 165 192 CUCUGGGU---CAU-CGGUCUACAUCGa ||||| || | | ||||:|||:|| GAGACGCACACGAACACCAGGTGTGGCa Hdac4 rno-miR-292-3p 170 195 uGUGAGUUU-UGGAC--CGCCGUgaa ||| |:|| ||| | |:|||| gCACACGAACACCAGGTGTGGCAgat Hdac4 rno-miR-296 111 139 uGUCCUAACUCC-------CCC-CCGGGA |||| ||| | ||| ||||:| gCAGGTGTGAAGCAGCAACGGGAGGCCTT Hdac4 rno-miR-297 212 240 GU-ACG---UAUGUA--CGUGUGUAUGUA || ||| | ||:| ||||||| |||| CAGTGCGCAACACGTGGGCACACAGACAT Hdac4 rno-miR-29a 378 399 UUG-GCUAAAGUCUACCACGAu ||| :|||| | ||||||| AACTTGATTAAAACTGGTGCTt Hdac4 rno-miR-29b 374 399 UUGU---GACUAAAGUUUACCACGAu |||| :||||| || ||||||| AACAAACTTGATTAAAACTGGTGCTt Hdac4 rno-miR-29c 379 399 UG-GCUAAAGUUUACCACGAu || :|||| || ||||||| ACTTGATTAAAACTGGTGCTt Hdac4 rno-miR-325 244 269 uGUGAAUGACUCGUG---GAUGAUCC || :| ||||| ||:||:|| gCAGAAGCCAAGCACACGCTGCTGGG Hdac4 rno-miR-329 101 121 uuUUUCCAAUCGACCCACACaa ||:|| ||| |||||| cgAAGGGACAGC-AGGTGTGaa Hdac4 rno-miR-33 196 219 GU-UACGUUG----AUGUUACGUG || ||| ||| |||:|||:| CAGATGGAACACAGGACAGTGCGC Hdac4 rno-miR-330 64 85 AGAGACGUC-CGGGACACGAAACg || || | | |:|| ||| ||| TCACTCCTGCGTCC--TGCCTTGg Hdac4 rno-miR-331 263 282 AAGAUCCUAUCCGGGUCCccg | ||:||:| |||||| TGCTGGGGT-CCCCCAGGaaa Hdac4 rno-miR-339 143 162 acuCGAGGACCUCCUGUCCcu || |||||| ||||| gccGC-CCTGGACCACAGGtc Hdac4 rno-miR-342 80 103 cugcCCACGCUAAAGACACACUCU ||||| | |||| ||| || ccttGGTGCTCTCTCTGAGTGCGA Hdac4 rno-miR-344 177 197 ugccaGUCCGAAACCGAUCUAGU |||| | |||| |||||| aacacCAGG-TGTGGC-AGATCA Hdac4 rno-miR-346 294 320 UCUCCG---UCCG-UGAGUCCGUCUgu ||| || ||| |||::|||||| AGAAGCTTGTGGCAACTTGGGCAGAgt Hdac4 rno-miR-351 258 281 GUCCGAGUUUCCCGAGGAGUCCcu || ||| :|||: || |||| CACGCTGCTGGGGTCCCCCAGGaa Hdac4 rno-miR-370 94 116 uugguccaaggugggGUCGUCCg ||||||| ctgagtgcgaagggaCAGCAGGt Hdac4 rno-miR-370 154 186 uugGUCCA-A-----G-GUGGG---GUCGUCCg ||||| | | ||| | || |||| ccaCAGGTCTGGAGACGCACACGAACACCAGGt Hdac4 rno-miR-378 146 167 uGUGUCCUGGACCUCAGUCCUC | | ||||| :||| |||| gCCCTGGACCACAGGTCTGGAG Hdac4 rno-miR-412 168 191 UGC-CGAUCACCUGGUCCACUUCa ||| | | |||||||| :| ACGCACACGAACACCAGGTGTGGc Hdac4 rno-miR-450 196 224 GUAAUCCUUGUGU------A-GCGUUUUu || |||||||| | ||||| | CAGATGGAACACAGGACAGTGCGCAACAc Hdac4 rno-miR-483 98 120 uguuCUGCCCUCCCCUCCUCACU || |||| | ||| |||| gtgcGAAGGGACAGCAGGTGTGA Hdac4 rno-miR-483 156 190 UGUUCUGCCCUCCCC------------UCCUCACu |||:| | |||| | ||| ||| ACAGGTCTGGAGACGCACACGAACACCAGGTGTGg Hdac4 rno-miR-485 29 50 cuuaAGUAGUGCCG-GUCGGaga || |:| ||| ||||| tctgTC-TTAAGGCTCAGCCaag Hdac4 rno-miR-497 249 267 auGUUUGGUGUCACACGACGAC | || |||| ||||||| agCCAAGCACAC---GCTGCTG Hdac4 rno-miR-501 269 295 aaAGUGGGUCC---C--UGUUUCCUaa || |||||| | ||:||||| ggTCCCCCAGGAAAGCCACGAAGGAag Hdac4 rno-miR-503 245 267 GUCAU--G-ACAAGGGCGACGAu ||| | | | | ||||||| CAGAAGCCAAGCACACGCTGCTg Hdac4 rno-miR-542-3p 17 37 aAGUCAAUAGUUAGACAGugu || ||:|| :|||||| cTCCTTTGTCTGTCTGTCtta Hdac4 rno-miR-542-5p 260 278 GCACUGUACUACUAGGGGCUC || :| ||: |:||||| || CGCTGC-TGG-GGTCCCCCAG Hdac4 rno-miR-7b 415 435 uuGUUUUAGUGU-UCAGAAGGu || |||| || |||| ||| ccCACAATCCCACAGTC-TCCg Hdac4 rno-miR-140 439 446 ---------------------------GAUGGUAUCCCAUUUUGGUGA || ||:|: |||||||| UUUGAUUCUUACCCACAAUCCCACAGUCU-CCGUGU----AAACCACUC Hdac4 rno-miR-210 168 175 -------AGUCGGCGA-----------CAG---UGUGCGUGUC || ||||| ||| | ||||||| AGGCCUUUCUGCCGCCCUGGACCACAGGUCUGGAGACGCACAC Hdac4 rno-miR-218 253 260 -----UGUACCAA---------------UCUA--GUUCGUGUU ||:||| ||| |||||||| GCAACACGUGGGCACACAGACAUGCCGCAGAAGCCAAGCACAC Hdac4 rno-miR-29a 392 399 ---------------------UUGG-CUAAAGUCUACCACGAU |||: |||| ||||||| AAGAUCUAAUAAUACAGAACAAACUUGAUUAAAACUGGUGCUU Hdac4 rno-miR-29b 392 399 ---------------------UUGUGACUAAAGUUUACCACGAU ||| :||||| || ||||||| AAGAUCUAAUAAUACAGAACAAAC-UUGAUUAAAACUGGUGCUU Hdac4 rno-miR-29c 392 399 U-----------------------GGCUAAAGUUUACCACGAU ::|||| || ||||||| AAGAUCUAAUAAUACAGAACAAACUUGAUUAAAACUGGUGCUU Hdac4 rno-miR-370 109 116 U----UGGU-CCAA-GGUGGG--------------GUCGUCCG :|| ||| :| |:| |||||||: GUCCUGCCUUGGUGCUCUCUCUGAGUGCGAAGGGACAGCAGGUG Hdac4 rno-miR-503 260 267 --------------------GUCA-UGACAAGG--GCGACGAU ||| :| | |||||||: GUGGGCACACAGACAUGCCGCAGAAGCCAAGCACACGCUGCUGG

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Hdac4 RAID00268471 rno-miR-29b-3p miRNA MIMAT0000801 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00326814 rno-miR-3577 miRNA MIMAT0017863 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00577968 rno-miR-3064-3p miRNA MIMAT0035738 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00601479 rno-miR-29c-3p miRNA MIMAT0000803 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00714146 rno-miR-3594-5p miRNA MIMAT0017898 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00950051 rno-miR-543-5p miRNA MIMAT0004787 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID00964748 rno-miR-153-5p miRNA MIMAT0017135 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID01019353 rno-miR-3547 miRNA MIMAT0017802 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID01150462 rno-miR-299b-5p miRNA MIMAT0017833 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID01298932 rno-miR-126a-5p miRNA MIMAT0000831 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID01676504 rno-miR-3084d miRNA MIMAT0035745 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID01751445 rno-miR-3559-5p miRNA MIMAT0017827 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID02088250 rno-miR-29a-3p miRNA MIMAT0000802 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID02135074 rno-miR-140-5p miRNA MIMAT0000573 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID02409930 rno-miR-203b-5p miRNA MIMAT0017799 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID02659236 rno-miR-299a-5p miRNA MIMAT0000901 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID03097043 rno-miR-3084a-3p miRNA MIMAT0035740 Hdac4 mRNA 363287 Prediction 0.1828 Hdac4 RAID03446795 rno-miR-3084b-3p miRNA MIMAT0035742 Hdac4 mRNA 363287 Prediction 0.1828