DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
Pias3 | rno-let-7a | 607 | 632 | -UUGAUAUGU-UGGAUGAUGGAGU- | ::| :| :||||||:||| : | GGGCGUGGCCUGCCUACUGCCUGGG |
Pias3 | rno-let-7b | 612 | 632 | -UUGGUGUGUUGGAUGAUGGAGU- | ::|| :||||||:||| : | UGGCCU----GCCUACUGCCUGGG |
Pias3 | rno-let-7c | 612 | 632 | -UUGGUAUGUUGGAUGAUGGAGU- | ::|| :||||||:||| : | UGGCCU----GCCUACUGCCUGGG |
Pias3 | rno-let-7d | 608 | 630 | -UGAUACGU-UGGAUGAUGGAGA | :| || :||||||:||| | GGCGUGGCCUGCCUACUGCCUG- |
Pias3 | rno-let-7i | 603 | 632 | -UGUCGUGUUU------GAUGAUGGAGU- | |||| :|: |||||:||| : | AACAGGGCGUGGCCUGCCUACUGCCUGGG |
Pias3 | rno-miR-106b | 21 | 44 | -UAGACGUGACA---GUCGUGAAAU | ||:| :|||| :|||||| | AAUUUCUACUGGCCCUAGCACUG-- |
Pias3 | rno-miR-125b | 573 | 605 | AGUGU--UCAA---------UCCCAGAGUCCCU- | :| |||| |||| ||| |||| | -GGCCUUAGUUGUGAUCCCCAGGGGCUC-GGGAA |
Pias3 | rno-miR-129* | 321 | 341 | UACGAAAAACCCCAUUCCCGAA | || |||||| |||||| | -AGCCUCUUGGGGAAAGGGCA- |
Pias3 | rno-miR-141 | 242 | 278 | GGUA--GAAAU-----------GGUCUGUCACAAU- | ||| ||||: |:||:||||| | | ACAUUCCUUUGGGUAGGGUAACCUAGGCAGUGGGAG |
Pias3 | rno-miR-145 | 591 | 612 | UUCCCUAAGGACCCUUUUGACCUG- | |||| |: |||| || ||:| | CAGGGG--CUCGGGA--ACAGGGCG |
Pias3 | rno-miR-150 | 249 | 280 | GUGACCAUGUUCCCA-----------ACCCUCU- | :||| ||||| ||||||: | -UUUGGGU--AGGGUAACCUAGGCAGUGGGAGGC |
Pias3 | rno-miR-151* | 277 | 304 | AUGAUCUGA----CA---CUCGAGGAGCU | :| |||: | |:|:||||| | GGC-AGAUGGAAGGGUAGGGGUUCCUCA- |
Pias3 | rno-miR-154 | 221 | 268 | GCUUC-----------CGUUGUG-------------CCUAUUGGAU | |||| |:|:||| ||:||||||| | GGAAGUGUUCUUUGAUGUAGCACAUUCCUUUGGGUAGGGUAACCUAG |
Pias3 | rno-miR-17 | 27 | 49 | -UGAU--GGA-CGUGACAUUCGUGAAAC | |||: ||| |||||| |||| | UACUGGCCCUAGCACUG--AGCAG---- |
Pias3 | rno-miR-18 | 708 | 736 | AUAGA-CGUGAUCU-------ACGUGGAAU | || || ||||| |||||||| | -CUCAGGC-CUAGAUUGUUCUUGCACCUUU |
Pias3 | rno-miR-181a | 840 | 870 | UGAGUGGCUG------UCGCAACUUACAA- | |||:|| || :|: |||||||| | UCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-181b | 840 | 870 | -GGGUGGCUG------UCGUUACUUACAA- | |:|:|| || :|: :|||||||| | UCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-181c | 840 | 870 | UGAGUGGCUG-----UCCA--ACUUACAA- | |||:|| || |||| |||||||| | UCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-183 | 859 | 884 | GUCACU--UAAGAUGGUCACGGUAU- | |||| :||||: || |:|||: | -UGUGAAUGUUCUGUGAGCGUCAUGG |
Pias3 | rno-miR-184 | 380 | 409 | -UGGGAA--UAGUCAAGA---GGCAGGU- | |||| ||| ||||| :|||||| | AACCCAAACAUCUGUUCUUUUUCGUCCAU |
Pias3 | rno-miR-185 | 621 | 641 | CUUGACGGAA--AGAGAGGU- | ||||||| ||||||:| | -UACUGCCUGGGUCUCUCUAU |
Pias3 | rno-miR-192 | 427 | 448 | CCGACAGUUAAGUAUCCAGUC- | |||||| | : ||||||| | -ACUGUCAGGUGGCAGGUCAGA |
Pias3 | rno-miR-193 | 90 | 114 | GACCCU-GAAACA----UCCGGUCAA | |||: | ||| ||||||| | -AGGGGUCAUUGGUCAAAGGCCAGG- |
Pias3 | rno-miR-195 | 63 | 81 | CGGUUAUAAAGACACGACGAU | |||| ||| |||||| | CCCAACCC--CUG-GCUGCUC |
Pias3 | rno-miR-196a | 602 | 631 | GGUUGU--UGUACUU------UGAUGGAU- | |||| :|:||: |||:|||: | -GAACAGGGCGUGGCCUGCCUACUGCCUGG |
Pias3 | rno-miR-196b | 597 | 624 | -GGUUGUUGUCCU---UU-GAUGGAU- | :|:: ||||||: :: ||:|||| | CUCGGGAACAGGGCGUGGCCUGCCUAC |
Pias3 | rno-miR-200a | 241 | 278 | -UGUAG------------CAAUGG-UCUGUCACAAU- | ||||: || ||| ||:||||| | | CACAUUCCUUUGGGUAGGGUAACCUAGGCAGUGGGAG |
Pias3 | rno-miR-204 | 265 | 289 | -UCCGU-AUCCUACUGUUUCCCUU- | ||||| |:||| |:||:| |||| | UAGGCAGUGGGA-GGCAGAUGGAAG |
Pias3 | rno-miR-20a* | 219 | 242 | -ACAUUCACGAGC-AUUACGUCA | || |||||:|| |:|||:|| | UUGGAAGUGUUCUUUGAUGUAGC |
Pias3 | rno-miR-211 | 265 | 289 | -UCCGUU-UCCUACUGUUUCCCUU- | |||||: :||| |:||:| |||| | UAGGCAGUGGGA-GGCAGAUGGAAG |
Pias3 | rno-miR-214 | 613 | 634 | GACGGACAGAC-ACGGACGACA- | ||||| || |||||| || | -GGCCUGCCUACUGCCUGG-GUC |
Pias3 | rno-miR-215 | 427 | 447 | CAGACAGUUUAGUAUCCAGUA | ||||||::| : |||||| | -ACUGUCAGGUGGCAGGUCAG |
Pias3 | rno-miR-22 | 311 | 346 | UGUCAAGAAGUUGA------------CCGUCGAA- | ||| ||||||:| |||||:|| | CCAGAUCUUCAGCCUCUUGGGGAAAGGGCAGUUUC |
Pias3 | rno-miR-224 | 671 | 707 | -AUUUGC-----CUUGGU------GAUCACUGAAC- | ||||| |::|| |||||||| || | CUAAACAGUCAAGGGCCUAAGCUUCUAGUGACCUGU |
Pias3 | rno-miR-23a | 784 | 809 | -CCUUUA---GGGACCGUUACACUA- | ||: ||||| ::||||||| | AGGGCCAAAGCCCUG-UGAUGUGAUU |
Pias3 | rno-miR-23b | 257 | 278 | -CCAUUAGGGACCGUUACACUA | ||||| ||: ||||:|| || | GGGUAA-CCUAGGCAGUGGGAG |
Pias3 | rno-miR-27a | 784 | 803 | CGCCUUGAAUCGGUGACACUU | ||: | |||| |||||| | -AGGGCCAAAGCC-CUGUGAU |
Pias3 | rno-miR-27b | 782 | 803 | CGUCUUGAA-UCGGUGACACUU | |||::| |||| |||||| | UCAGGGCCAAAGCC-CUGUGAU |
Pias3 | rno-miR-28 | 47 | 66 | GAGUUAUCUGACACUCGAGGAA | :||| |:||||:|:||| | --AGAUACAUUGUGGGUUCCC- |
Pias3 | rno-miR-290 | 886 | 929 | -UUUUUC----ACGG--------------GGGUAUCAAACUC | ::|:|| ||: |||||:||||| | | GGGAGAGAUGUUGUACCUUGUUUUCCAGACCCAUGGUUUGUGG |
Pias3 | rno-miR-291-5p | 783 | 805 | UCUCUCCCGGA---GGUGAAACUAC- | |||||| || || ||||| | ---CAGGGCCAAAGCC-CUGUGAUGU |
Pias3 | rno-miR-296 | 916 | 942 | UGU-CCUAACUCCCC----CCCGGGA | || || ||| |||| |||:|| | CCAUGGUUUGUGGGGCAGAGGGUCCA |
Pias3 | rno-miR-298 | 600 | 629 | -CCU--UCUUG--UCGGGAGGA-GACGG- | ||| ||::| :|||: ||| ||||| | GGGAACAGGGCGUGGCCUGCCUACUGCCU |
Pias3 | rno-miR-29b | 36 | 79 | -UUGUGACUAAAGUU-------UACCA-------------CGAU | |:|||||| ||: :||| |||: | UAGCACUGAG--CAGAUACAUUGUGGGUUCCCAACCCCUGGCUGC |
Pias3 | rno-miR-29c* | 87 | 106 | CUUGUGGUCCUCUUUAGCCAGU- | :||||:| ||:||||| | ----CUCAGGGGUCAUUGGUCAA |
Pias3 | rno-miR-30c | 874 | 903 | -CGA-----CUCUCACAUC-CUACAA-AUGU | || |||:| || |||||| ||| | AGCGUCAUGGAGGGG--AGAGAUGUUGUACC |
Pias3 | rno-miR-324-3p | 252 | 276 | GGUCGUCG---UGGACCCCGUCACC- | :|:|| |||| |||||||| | -GGGUAGGGUAACCUA-GGCAGUGGG |
Pias3 | rno-miR-324-5p | 786 | 807 | UGUGGUUACGGGAUCCCCUACGC- | :|||| |||||: ||||:| | -GGCCAAAGCCCUGU--GAUGUGA |
Pias3 | rno-miR-326 | 561 | 598 | UGACCUCCU----UCCC-------------GGGUCUCC- | |||||| ||| |||||:|| | --AGGAGGAAACAAGGCCUUAGUUGUGAUCCCCAGGGGC |
Pias3 | rno-miR-327 | 770 | 789 | UGGGAGUACGGGGA-GUUCC- | |||| |||||| ||:|| | --ACUCAGGCCCCUUCAGGGC |
Pias3 | rno-miR-328 | 917 | 943 | -UGCCU----UCCCGUCUCUCCCGGUC | |:|| :|||||||| || ||| | CAUGGUUUGUGGGGCAGAG-GGUCCAU |
Pias3 | rno-miR-329 | 195 | 219 | -UUUUUCCAAUCGACCCACACAA- | ||||||| |||| |||| | GAAAAAGGACAUUGGGGUCUGUUU |
Pias3 | rno-miR-331 | 557 | 599 | AAGA---UCCUA---UCCG--------------GGUCCCCG | || |||| |||| |||||||| | CUCGAGGAGGAAACAAGGCCUUAGUUGUGAUCCCCAGGGGCU |
Pias3 | rno-miR-336 | 265 | 293 | -UCUGA---UCUA----UACCUUCCCACU | ||:| :|| |||||||||| | UAGGCAGUGGGAGGCAGAUGGAAGGGUA- |
Pias3 | rno-miR-340 | 420 | 455 | -CCGAUAU-----UUCAUUGA-----CUCUGCCU- | ||| ||| |:||::| ||||:||| | UGGCCAUACUGUCAGGUGGCAGGUCAGAGAUGGAC |
Pias3 | rno-miR-342 | 855 | 888 | CUGCCCACGCUA--AAGACACA--------CUCU- | || ||:|| ||||||| |||: | --AGGUUGUGAAUGUUCUGUGAGCGUCAUGGAGGG |
Pias3 | rno-miR-343 | 867 | 893 | -AGAC-C-CGU-GUGCCU-CCCUCU- | |||| | ||: ||:||| |||||| | UUCUGUGAGCGUCAUGGAGGGGAGAG |
Pias3 | rno-miR-346 | 251 | 276 | UCUCCGUCCG--UGAGUCCGUCUGU- | :||:||| || :|||||| : | -UGGGUAGGGUAACCUAGGCAGUGGG |
Pias3 | rno-miR-347 | 256 | 278 | ACCCGCUGGGUCU----CCCUGU | |||: |||:||: |||| | AGGGUAACCUAGGCAGUGGGAG- |
Pias3 | rno-miR-34a | 126 | 156 | -UUGUUGGUCGAU--UCU-----GUGACGGU | :|| ||| ||| :| ||||||| | GGAC-ACCUGCUUUUGGCCUUAUCACUGCCU |
Pias3 | rno-miR-34b | 137 | 158 | GUUAGUCGAUUAAUGUGACGGAU- | |::|| ||||||||| | --UUUGGCCUUAU-CACUGCCUAA |
Pias3 | rno-miR-34c | 133 | 157 | -CGUUAGUCGAUUGAUGUGACGGA- | || |::|| |||||||| | UGCUUUUGGCCUUAU-CACUGCCUA |
Pias3 | rno-miR-351 | 593 | 633 | GUCCGAGUU----UCCCGA---GGA---------GUCCCU | :|||||:: ||||| ||| | ||| | GGGGCUCGGGAACAGGGCGUGGCCUGCCUACUGCCUGGGU |
Pias3 | rno-miR-361 | 66 | 86 | CAUGGGGACCUCUAAGACUAUU | |||||||| : |||||| | -AACCCCUGGCUGCUCUGAUC- |
Pias3 | rno-miR-422b | 140 | 169 | -CGGAA----GACUGAG-GUUCAGGUCA- | ||||| ||| || |||| ||||| | GGCCUUAUCACUGCCUAACAAGGCCAGUA |
Pias3 | rno-miR-449 | 129 | 156 | -UGGUCGA---UUGUUAU-GUGACGGU | ||| ||| ::| || ||||||| | CACCUGCUUUUGGCCUUAUCACUGCCU |
Pias3 | rno-miR-483 | 277 | 299 | -UGUUCUGCCCUCCCCUCCUCACU | :| |||:|| |||| |||:|| | GGC-AGAUGGAAGGGUAGGGGUU- |
Pias3 | rno-miR-485 | 143 | 173 | CUUAAGUAGUG----------CCGGUCG-GAGA | |:||||| ||||||: ||| | ---CUUAUCACUGCCUAACAAGGCCAGUACUCA |
Pias3 | rno-miR-489 | 786 | 810 | CGACGGUAUAU--ACACUACAGUAA- | |||| |||||||| ||| | --GGCCAAAGCCCUGUGAUGUGAUUU |
Pias3 | rno-miR-493 | 98 | 126 | GACCG-----UGUGUCA--UCUGGAAGU- | |||: :| ||| |||:||||| | UUGGUCAAAGGC-CAGGCCAGAUCUUCAU |
Pias3 | rno-miR-542-5p | 797 | 829 | GCACUGUACUAC---------UAGGGG-CUC- | ||||::|||| |||||| ||| | UGUGAUGUGAUUUCACUUUUUAUCCCCAGAGC |
Pias3 | rno-miR-93 | 33 | 58 | GAUGGA-CGUG-CUUGUC-GUGAAAC- | ||| |||| ||:||| :|| ||| | --CCCUAGCACUGAGCAGAUACAUUGU |
Pias3 | rno-let-7a | 609 | 630 | uugauauGUUGGAUGAUGGAgu | | :||||||:||| | gcgtggcCTGCCTACTGCCTgg |
Pias3 | rno-let-7b | 609 | 630 | uugguguGUUGGAUGAUGGAgu | | :||||||:||| | gcgtggcCTGCCTACTGCCTgg |
Pias3 | rno-let-7c | 609 | 630 | uugguauGUUGGAUGAUGGAgu | | :||||||:||| | gcgtggcCTGCCTACTGCCTgg |
Pias3 | rno-let-7d | 610 | 630 | ugauacGUUGGAUGAUGGAga | | :||||||:||| | cgtggcCTGCCTACTGCCTgg |
Pias3 | rno-let-7i | 611 | 630 | uguCGUGUUUGAUGAUGGAgu | || | : |||||:||| | gtgGC-CTGCCTACTGCCTgg |
Pias3 | rno-miR-106b | 22 | 45 | UAGACGUGACAG---UCGUGAaau | ||:| :|||| | |||||| | ATTTCTACTGGCCCTAGCACTgag |
Pias3 | rno-miR-125a | 72 | 94 | guguccaauuucccaGAGUCCCu | ||||||| | tggctgctctgatccCTCAGGGg |
Pias3 | rno-miR-125b | 73 | 94 | aguguucaaucccaGAGUCCCu | ||||||| | ggctgctctgatccCTCAGGGg |
Pias3 | rno-miR-125b | 567 | 596 | agUGUUC---AAUC----CCA-GAGUCCCu | ||||| |||| | | | ||||| | aaACAAGGCCTTAGTTGTGATCCCCAGGGg |
Pias3 | rno-miR-129* | 320 | 341 | uaCGAAAAACCCCAUUCCCGaa | || | |||||| |||||| | caGCCTCTTGGGGAAAGGGCag |
Pias3 | rno-miR-141 | 254 | 276 | gguagaAAUGG-UCUGUCACaau | | ||| ||:||||| | gtagggTAACCTAGGCAGTGgga |
Pias3 | rno-miR-146 | 819 | 844 | uuGGGU----ACCUUAAGUCAAGAGu | |||| || |: ||||||| | tcCCCAGAGCTGTAGCAGAGTTCTCg |
Pias3 | rno-miR-150 | 254 | 278 | gugaCCAU--GUUCC-CAACCCUCu | |||| | ||| |||||| | gtagGGTAACCTAGGCAGTGGGAGg |
Pias3 | rno-miR-151* | 283 | 304 | augaUCUGACACUCGAGGAGcu | ||: | |:|:||||| | tggaAGGGTAGGGGTTCCTCac |
Pias3 | rno-miR-154 | 249 | 266 | gcuuCCGUUGUGCCUAUUGGAU | ||:| ||:||||||| | tttgGGTA----GGGTAACCTA |
Pias3 | rno-miR-17 | 25 | 45 | uGAUGGACGUGACAUUCGUGAaac | ||||: || || |||||| | tCTACTGGCCCT---AGCACTgag |
Pias3 | rno-miR-18 | 707 | 735 | auAGACGUGAUCU-------ACGUGGAAu | || | ||||| |||||||| | gcTCAGGCCTAGATTGTTCTTGCACCTTt |
Pias3 | rno-miR-181a | 840 | 868 | uGAGUGGCUGUCG----CA--ACUUACAA | |||:|| ||| : || |||||||| | tCTCGCCTACAATAAAGGTTGTGAATGTT |
Pias3 | rno-miR-181b | 841 | 868 | GGGUGGCUGUCGUU------ACUUACAA | |:|:|| ||| :|| |||||||| | CTCGCCTACAATAAAGGTTGTGAATGTT |
Pias3 | rno-miR-181c | 840 | 868 | uGAGUGGCUG-----UCCA--ACUUACAA | |||:|| || |||| |||||||| | tCTCGCCTACAATAAAGGTTGTGAATGTT |
Pias3 | rno-miR-183 | 858 | 882 | guCACUU--AAGAUGGUCACGGUAu | ||||| ||||:: || |:||| | ttGTGAATGTTCTGTGAGCGTCATg |
Pias3 | rno-miR-184 | 381 | 407 | UGGG--AAUAGUCAAG---AGGCAGGU | |||| ||| |||| |:|||||| | ACCCAAACATCTGTTCTTTTTCGTCCA |
Pias3 | rno-miR-185 | 620 | 639 | cuUGACGGA--AAGAGAGGU | ||||||| ||||||:| | ctACTGCCTGGGTCTCTCTA |
Pias3 | rno-miR-192 | 426 | 446 | ccGACAGUUAAGUAUCCAGUC | ||||||: | : ||||||| | taCTGTCAGGTGGCAGGTCAG |
Pias3 | rno-miR-193 | 148 | 168 | gaccCUGAAACAUCCGGUCAa | | || |||||||| | cactGCCTAACAAGGCCAGTa |
Pias3 | rno-miR-193 | 90 | 114 | gaCCCUG-AAACA---UCCGGUCaa | ||| | || || ||||||| | agGGGTCATTGGTCAAAGGCCAGgc |
Pias3 | rno-miR-195 | 60 | 80 | cgguuauaaagacaCGACGAu | |||||| | gttcccaacccctgGCTGCTc |
Pias3 | rno-miR-196a | 601 | 629 | ggUUGU--UGUACU------UUGAUGGAu | |||| :|:||: |||:||| | ggAACAGGGCGTGGCCTGCCTACTGCCTg |
Pias3 | rno-miR-196b | 598 | 629 | gGUUGUUGUCCU-----------UUGAUGGAu | |:: ||||||: |||:||| | tCGGGAACAGGGCGTGGCCTGCCTACTGCCTg |
Pias3 | rno-miR-200a | 254 | 276 | uguagCAAUGG-UCUGUCACaau | || ||| ||:||||| | gtaggGTAACCTAGGCAGTGgga |
Pias3 | rno-miR-204 | 266 | 292 | UCCGU-AUCCUACUG-----UUUCCCuu | ||||| |:||| |:| :||||| | AGGCAGTGGGA-GGCAGATGGAAGGGta |
Pias3 | rno-miR-20a* | 220 | 241 | ACAUUCACGAG-CAUUACGUCa | || |||||:|| |:|||:|| | TGGAAGTGTTCTTTGATGTAGc |
Pias3 | rno-miR-211 | 266 | 292 | UCCGUUUCCUACUG-----UUUCCCuu | |||||: ||: |:| :||||| | AGGCAGTGGGAGGCAGATGGAAGGGta |
Pias3 | rno-miR-214 | 607 | 626 | gaCGGACAGACACGGACGACa | || || | ||||| ||| | ggGCGTGGC-CTGCCTACTGc |
Pias3 | rno-miR-215 | 426 | 446 | caGACAGUUUAGUAUCCAGUa | ||||||::| : |||||| | taCTGTCAGGTGGCAGGTCAg |
Pias3 | rno-miR-222 | 217 | 242 | cucugggUCAUCGG--UCUACAUCGa | |||: :| |||||||| | ttttggaAGTGTTCTTTGATGTAGCa |
Pias3 | rno-miR-224 | 679 | 705 | AUUUGCC----UUGGUGAUCACUGAAC | | || || |:|: |||||||| || | TCAAGGGCCTAAGCTTCTAGTGACCTG |
Pias3 | rno-miR-23a | 786 | 807 | CC--UUUAGGGACCGUUACACUA | || ||| |||| |::||||||| | GGCCAAAGCCCT-GTGATGTGAT |
Pias3 | rno-miR-23b | 258 | 277 | CCAUUAGGGACCGUUACACUa | ||||| ||: ||||:|| || | GGTAA-CCTAGGCAGTGGGAg |
Pias3 | rno-miR-27a | 783 | 802 | cgCCUUGAAUCGGUGACACUu | ||: | || | |||||| | caGGGCCAAAG-CCCTGTGAt |
Pias3 | rno-miR-28 | 44 | 66 | gaGU-UAUCUGACACUCGAGGaa | || ||| |:||||:|:||| | agCAGATACATTGTGGGTTCCca |
Pias3 | rno-miR-290 | 902 | 927 | uuuuucACGG---GGGUAUCAAACuc | | || |||||:||||| | cttgttTTCCAGACCCATGGTTTGtg |
Pias3 | rno-miR-291-5p | 780 | 803 | ucucUCCCGG---AGGUGAAACUAC | |||||| || || ||||| | cttcAGGGCCAAAGCC-CTGTGATG |
Pias3 | rno-miR-298 | 601 | 627 | CCU--UCUUG--UCGGGAGGA-GACGG | ||| ||::| :|||: ||| ||||| | GGAACAGGGCGTGGCCTGCCTACTGCC |
Pias3 | rno-miR-29b | 50 | 80 | uUGUGA---CUAAAGUUU----ACC-ACGAu | |||:| |:|| | || ||| |||| | tACATTGTGGGTTCCCAACCCCTGGCTGCTc |
Pias3 | rno-miR-29c* | 82 | 104 | CUUGUG-GUCCUCUUUAGCCAGU | || | | ||||:| ||:||||| | GATCCCTCAGGGGTCATTGGTCA |
Pias3 | rno-miR-30c | 879 | 902 | cgACUCUCACAUC-CUACAA-AUGu | || ||| | || |||||| ||| | caTG-GAGGGGAGAGATGTTGTACc |
Pias3 | rno-miR-324-3p | 254 | 274 | ggUCGUCGUGGACCCCGUCACC | || : |||| |||||||| | gtAGGGTAACCT-AGGCAGTGG |
Pias3 | rno-miR-324-5p | 785 | 805 | uguGGUUACGGGAUCCCCUACGC | |||| ||||| | ||||:| | gggCCAAAGCCCT--GTGATGTG |
Pias3 | rno-miR-326 | 556 | 596 | UGA---CCUCC----UUCC----------C---GGGUCUCC | ||| ||||| |||| | |||||:|| | ACTCGAGGAGGAAACAAGGCCTTAGTTGTGATCCCCAGGGG |
Pias3 | rno-miR-327 | 768 | 787 | UGGGAGUAC-GGGGAGUUCC | |: |||| | |||:|||:|| | ATACTCAGGCCCCTTCAGGG |
Pias3 | rno-miR-328 | 770 | 791 | UGCCUUCCCGUCUCUCCCGGUc | || |:| | ||||||| | ACTCAGGCCCCTTCAGGGCCAa |
Pias3 | rno-miR-328 | 922 | 942 | ugcCUUCCCGUCUCUCCC-GGUc | | :|||| |||||| ||| | tttGTGGGGC--AGAGGGTCCAt |
Pias3 | rno-miR-329 | 196 | 217 | UUUUUCCAAUCGACCCACACAA | ||||||| | : |||| |||| | AAAAAGGACATTGGGGTCTGTT |
Pias3 | rno-miR-331 | 575 | 597 | aagAUC--CUAUCCGGGUCCCCG | ||| | | ||||||||| | cctTAGTTGTGATCCCCAGGGGC |
Pias3 | rno-miR-336 | 276 | 293 | UCUGAUCUAUACCUUCCCAcu | ||:| || |||||||||| | AGGC-AG--ATGGAAGGGTag |
Pias3 | rno-miR-340 | 426 | 453 | ccGAUAUUUCAUUG---A--CUCUGCCU | ||:| |:||::| | ||||:||| | taCTGTCAGGTGGCAGGTCAGAGATGGA |
Pias3 | rno-miR-342 | 853 | 876 | cUGCCCACGCUAAAGACACACUCu | | || ||:|| | :| |||||| | aAAGGTTGTGAATGTTCTGTGAGc |
Pias3 | rno-miR-343 | 868 | 891 | AGAC-C-CGU-GUGCCU-CCCUCU | |||| | ||: ||:||| |||||| | TCTGTGAGCGTCATGGAGGGGAGA |
Pias3 | rno-miR-346 | 264 | 284 | ucUCCGUC-CGUGAGUCCGUCUgu | |||||| | : ||||||| | ctAGGCAGTGGG---AGGCAGAtg |
Pias3 | rno-miR-347 | 256 | 278 | aCCCGCUGG----GUCUCCCUgu | |||: ||| ||| |||| | aGGGTAACCTAGGCAGTGGGAgg |
Pias3 | rno-miR-34a | 127 | 155 | uUGUUGGUCG--AUUC----U-GUGACGGu | || ||| || | :| | ||||||| | gAC-ACCTGCTTTTGGCCTTATCACTGCCt |
Pias3 | rno-miR-34b | 135 | 156 | guuAGUCGAUUAAU-GUGACGGAU | |::|| ||| ||||||||| | cttTTGGC--CTTATCACTGCCTA |
Pias3 | rno-miR-34b | 607 | 629 | guuagucgauuaaugUGACGGAu | ||||||| | gggcgtggcctgcctACTGCCTg |
Pias3 | rno-miR-34c | 134 | 155 | CGUUAGUCGAUUGAU-GUGACGGA | || |::|| :|| |||||||| | GCTTTTGGC--CTTATCACTGCCT |
Pias3 | rno-miR-351 | 71 | 94 | GUCCGA-GUUUCCCGAGGAGUCCCu | | |||| | | | |||||||| | CTGGCTGCTCTGATC-CCTCAGGGg |
Pias3 | rno-miR-351 | 571 | 596 | gUCC-GAGUU-UCCCGAGGAGUCCCu | ||| ||:|: | | ||| ||||| | aAGGCCTTAGTTGTGATCCCCAGGGg |
Pias3 | rno-miR-361 | 65 | 86 | caUGGGGACCUCUAAGACUAuu | |||||||| : |||||| | caACCCCTGGCTGCTCTGATcc |
Pias3 | rno-miR-409-5p | 246 | 265 | guuucAACGAGCCCAUUGGA | | | | ||||||||| | tccttTGGGTAGGGTAACCT |
Pias3 | rno-miR-422b | 141 | 167 | CGGAA----GACUGA-GGUUCAGGUCA | ||||| ||| || |||| ||||| | GCCTTATCACTGCCTAACAAGGCCAGT |
Pias3 | rno-miR-449 | 130 | 155 | UGGUCG---AUUGUUAU-GUGACGGu | ||| || |::| || ||||||| | ACCTGCTTTTGGCCTTATCACTGCCt |
Pias3 | rno-miR-483 | 277 | 299 | uguUCUGCCCUCCCCUCCUCAcu | |||:|| |||| |||:|| | ggcAGATGGAAGGGTAGGGGTtc |
Pias3 | rno-miR-485 | 304 | 327 | cuuAAGUAGUGCCG--GUCGGAGA | |||| || | |||||||| | cccTTCACCAGATCTTCAGCCTCT |
Pias3 | rno-miR-485 | 150 | 172 | cuuaagUAGUGCCGGUCG-GAGa | | || ||||||: ||| | ctgcctAACAAGGCCAGTACTCa |
Pias3 | rno-miR-489 | 784 | 808 | cgaCGGUAU--AUACACUACAGUAA | |||| | |||||||| ||| | aggGCCAAAGCCCTGTGATGTGATT |
Pias3 | rno-miR-493 | 105 | 124 | gaCCGUGUGUCAUCUGGAAGU | ||| || : |||:||||| | aaGGC-CAGGCCAGATCTTCA |
Pias3 | rno-miR-93 | 26 | 45 | GAUGGACGUGCUUGUCGUGAaac | ||||: || | :|||||| | CTACTGGCCC---TAGCACTgag |
Pias3 | rno-miR-125a | 87 | 94 | GUGUCCAAUUUCCCA-------------------------GAGUCCCU | |||| |||||||: | CAUUGU-----GGGUUCCCAACCCCUGGCUGCUCUGAUCCCUCAGGGGU |
Pias3 | rno-miR-125b | 87 | 94 | AGUGUUCAAUCCCA-------------------------GAGUCCCU | ||: || |||| |||||||: | -CAUU-GU--GGGUUCCCAACCCCUGGCUGCUCUGAUCCCUCAGGGGU |
Pias3 | rno-miR-146 | 837 | 844 | UU-----------------GGGUACCUUAAG----UCAAGAGU | |||| |||||||: | UGUGAUUUCACUUUUUAUCCCCAGAGCUGUAGCAGAGUUCUCGC |
Pias3 | rno-miR-18 | 728 | 735 | AUA-------GACGUGA-UCU-------------ACGUGGAAU | ||| || ||: |||||||| | UUCUAGUGACCUGUGCUCAGGCCUAGAUUGUUCUUGCACCUUU |
Pias3 | rno-miR-181a | 861 | 868 | U--------------GAGUGGCUGU------CGCAACUUACAA | |||:|| ||| |: |||||||| | AGCUGUAGCAGAGUUCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-181b | 861 | 868 | ---------------GGGUGGCUGU------CGUUACUUACAA | |:|:|| ||| |: :|||||||| | AGCUGUAGCAGAGUUCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-181c | 861 | 868 | U--------------GAGUGGCUGU-----CCA--ACUUACAA | |||:|| ||| ||| |||||||| | AGCUGUAGCAGAGUUCUCGCCUACAAUAAAGGUUGUGAAUGUUC |
Pias3 | rno-miR-193 | 161 | 168 | GACCCUG-------AAACA------------------UCCGGUCAA | |||| |||| |||||||| | ---GGACACCUGCUUUUGGCCUUAUCACUGCCUAACAAGGCCAGUA |
Pias3 | rno-miR-222 | 235 | 242 | --------CUCUGGG---------UCAUCGGU--CUACAUCGA | |:| |: |||: | |||||||| | AGGACAUUGGGGUCUGUUUUUGGAAGUGUUCUUUGAUGUAGCA |
Pias3 | rno-miR-324-3p | 267 | 274 | -------------------GGUCGUCG---UGGACCCCGUCACC | : :|:|| |||| |||||||| | UUGAUGUAGCACAUUCCUUUGGGUAGGGUAACCUA-GGCAGUGGG |
Pias3 | rno-miR-328 | 784 | 791 | UGCCUUC-------------------CCGUCUC--UCCCGGUC | ||| ||||||| | GGCUCUGUUCUCCUUCCCAAUACUCAGGCCCCUUCAGGGCCAA |
Pias3 | rno-miR-331 | 590 | 597 | A--AGA---UCCUA---UCC--------------GGGUCCCCG | || |||| ||| ||||||||| | GACUCGAGGAGGAAACAAGGCCUUAGUUGUGAUCCCCAGGGGCU |
Pias3 | rno-miR-34a | 148 | 155 | --------------UUGUUGGUCGAU--UCU-----GUGACGGU | :||| || ||| :| ||||||| | GCCAGAUCUUCAUGGACA-CCUGCUUUUGGCCUUAUCACUGCCU |
Pias3 | rno-miR-34b | 149 | 156 | ---------------------GUUAGUCGAUUAAUGUGACGGAU | | | || ||||||||| | CCAGAUCUUCAUGGACACCUGCUUUUGGCCUUAU-CACUGCCUAA |
Pias3 | rno-miR-34b | 622 | 629 | ------------------GUUA---GUCGAUUAAUGUGACGGAU | ||: ::|| :|||||||: | UCCCCAGGGGCUCGGGAACAGGGCGUGGCCUGCC-UACUGCCUGG |
Pias3 | rno-miR-34c | 148 | 155 | ---------------------CGUUAGUCGAUUGAUGUGACGGA | || | || |||||||| | GCCAGAUCUUCAUGGACACCUGCUUUUGGCCUUAU-CACUGCCUA |
Pias3 | rno-miR-351 | 87 | 94 | G-----UCCGAGUUUC-----CCGA---------GGAGUCCCU | :||:|| |||| ||||||||: | CAUUGUGGGUUCCCAACCCCUGGCUGCUCUGAUCCCUCAGGGGU |
Pias3 | rno-miR-409-5p | 258 | 265 | GUUUCAACGAG--------------------------CCCAUUGGA | |||| |:|| ||||||||| | --AAGU-GUUCUUUGAUGUAGCACAUUCCUUUGGGUAGGGUAACCUA |
Pias3 | rno-miR-449 | 148 | 155 | -----------------UGGUCGA---UUGUUAU-GUGACGGU | ||| ||| ::| || ||||||| | GCCAGAUCUUCAUGGACACCUGCUUUUGGCCUUAUCACUGCCU |
Pias3 | rno-miR-485 | 320 | 327 | ---------CUUAAGUAGUGCC------------GGUCGGAGA | |::||| |||| :|||||||| | GAAGGGUAGGGGUUCCUCACCCUUCACCAGAUCUUCAGCCUCUU |