DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004652 rno-miR-342-5p 54245 Crk gaGUUAGUGUCUAUCGUGGGGa |||| | | | |||||| aaCAAU--CUGUUUCCACCCCc 2 21 31 50 [rn4:10:63040325-63040344:+] 0.6346 121 6 -17.62 -0.1643 MIMAT0000614 rno-miR-151* 54245 Crk ggAGU-UCCUCGG---AGUCAGAUc |:| ||| |:| ||||||| ucUUACAGGUGUCAAAGCAGUCUAg 2 20 71 95 [rn4:10:63040365-63040389:+] 0.6024 145 7 -24.52 -0.8114 MIMAT0004716 rno-miR-28* 54245 Crk agGUCCUCGAGU---GUUAGAUCAc |||| | ||| ||:|||||| uaCAGGUG-UCAAAGCAGUCUAGUu 2 21 74 97 [rn4:10:63040368-63040391:+] 0.6024 145 6 -20.99 -0.1748 MIMAT0003209 rno-miR-363* 54245 Crk uuuaacgUAGCAC-UAGGUGGGc ||| || ||||||| gagaacaAUC-UGUUUCCACCCc 2 16 28 49 [rn4:10:63040322-63040343:+] 0.6346 144 7 -16.15 -0.9465 MIMAT0005283 rno-miR-872* 54245 Crk uccuccgaugacguUAUCAAGu ||||||| ------------guAUAGUUCc 2 9 1 10 [rn4:10:63040295-63040304:+] 0.7464 140 7 -6.10 -0.9069 MIMAT0005332 rno-miR-708* 54245 Crk gaUCUUCG-AGU---GUCAGAUCAAc | |:|: ||| |||||||||| uuACAGGUGUCAAAGCAGUCUAGUUu 2 21 73 98 [rn4:10:63040367-63040392:+] 0.6024 158 7 -17.90 -1.0505 MIMAT0012832 rno-miR-568 54245 Crk cacacauauguaaAUAUGUa |||||| cccaauugccgucUAUACAa 2 8 48 67 [rn4:10:63040342-63040361:+] 0.6346 120 6 -6.06 -0.1799 MIMAT0012833 rno-miR-582 54245 Crk ucAUUGACCA-ACUUGUU-GACAu |:|| | | |||||| |||| gcUGACAGAUGAGAACAAUCUGUu 2 21 18 41 [rn4:10:63040312-63040335:+] 0.6346 127 0 -13.16 -0.6324 MIMAT0012852 rno-miR-667 54245 Crk gaacccgacccaccGUCCACAGu |||||||| auacaauuuucuuaCAGGUGUCa 2 10 62 84 [rn4:10:63040356-63040378:+] 0.6185 145 7 -17.43 -1.1579 MIMAT0005331 rno-miR-708 54245 Crk ggGUC-GAUCUA--ACAUUCG-AGGAa ||| |||| | | ||||| |||| agCAGUCUAGUUUAUAUAAGCAUCCUg 2 22 86 112 [rn4:10:63040380-63040406:+] 0.6024 131 0 -18.30 -1.1675

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G008960 Crk Rattus norvegicus 54245

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Crk; Crko rno-miR-151 70 98 -GGAGU-UCCUCGGA---GUCAGAUCA- :||:| ||| |:| ||||||||| UUCUUACAGGUGUCAAAGCAGUCUAGUU Crk; Crko rno-miR-214 108 122 GACGGACAGACACGGACGACA ||||| ||||||: --UCCUGU---UGCCUGUG-- Crk; Crko rno-miR-31 87 120 -GUC-GAUACGG------UCGUAG---AACGGA- ||| ||| |:: |||||| |||||| GCAGUCUA-GUUUAUAUAAGCAUCCUGUUGCCUG Crk; Crko rno-miR-363-5p 15 50 UUUAACGUAG--C-ACU------------AGGUGGGC |||| | ||| ||||||| --UUUGCUGACAGAUGAGAACAAUCUGUUUCCACCCC Crk; Crko rno-miR-383 103 127 -UCGGU-GUCAGUGGAAGACUAGA- ||| | ||::||| |||||| AAGCAUCCUGUUGCCUG-UGAUCUU Crk; Crko rno-miR-497 1 30 -AUGUUU-GGUGUCACACGACG----AC- ||:|: ||||| ||||| || GUAUAGUUCCACACUUUGCUGACAGAUGA Crk; Crko rno-miR-151 71 96 gGAGU-UCCUCGG---AGUCAGAUCA ||:| ||| |:| ||||||||| tCTTACAGGTGTCAAAGCAGTCTAGT Crk; Crko rno-miR-214 88 116 GACGGA-CAGACA----C---GGACGACa | |:|| ||:| | | ||||:|| CAGTCTAGTTTATATAAGCATCCTGTTGc Crk; Crko rno-miR-31 93 118 gUC-GAUACGGUCGU---AGAACGGA || :||| : |||| | |||||| tAGTTTATATAAGCATCCTGTTGCCT Crk; Crko rno-miR-363-5p 28 49 uuuaacgUAGCAC-UAGGUGGGc ||| || ||||||| gagaacaATC-TGTTTCCACCCc Crk; Crko rno-miR-383 104 125 UCG-GUGUCAGUGGAAGACUAGA ||| : | ||::|| | |||||| AGCATCCTGTTGCC-TGTGATCT Crk; Crko rno-miR-497 2 24 AUGUU-UGGUGUCACACGACgac ||:|: ||||| | ||||| TATAGTTCCACACTTTGCTGaca Crk; Crko rno-miR-151 89 96 -----------------GGAGU-UCCUCGGA---GUCAGAUCA :||:| ||| |:| ||||||||| UGCCGUCUAUACAAUUUUCUUACAGGUGUCAAAGCAGUCUAGUU Crk; Crko rno-miR-363-5p 42 49 UUU------AACG---------------UAGCACU-AGGUGGGC |||| ||| || ||||||| UUCCACACUUUGCUGACAGAUGAGAACAAUC-UGUUUCCACCCC

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Crk RAID00491922 rno-miR-667-3p miRNA MIMAT0012852 Crk mRNA 54245 Prediction 0.1828 Crk RAID00763358 rno-miR-363-5p miRNA MIMAT0003209 Crk mRNA 54245 Prediction 0.1828 Crk RAID01322539 rno-miR-126a-3p miRNA MIMAT0000832 Crk mRNA 54245 Western Blot//Reporter Assay//Immunoassay 0.9526 Crk RAID02387527 rno-miR-708-3p miRNA MIMAT0005332 Crk mRNA 54245 Prediction 0.1828 Crk RAID03321160 rno-miR-708-5p miRNA MIMAT0005331 Crk mRNA 54245 Prediction 0.1828 Crk RAID03467579 rno-miR-151-3p miRNA MIMAT0000614 Crk mRNA 54245 Prediction 0.1828