DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005509 dme-miR-991 31680 Hira ugaaagguuugaUGUUGAAAuu | |||||| uauaagcguuaaAAAACUUUua 3 11 56 77 [dm3:X:7619834-7619855:+] 0.5397 122 0 -6.39 -0.2028 MIMAT0005022 dme-miR-1009 31680 Hira gacuuUACAUU--GU--UAAAAACUCu |||||| || | |||||| caguuAUGUAAAUCAUUAAAUUUGAGu 2 19 127 153 [dm3:X:7619905-7619931:+] 0.5397 124 6 -11.59 -0.1859 MIMAT0005026 dme-miR-1013 31680 Hira gcucaagccgUAUGAAAAUa | ||||||| aagcguuaaaAAACUUUUAu 2 11 59 78 [dm3:X:7619837-7619856:+] 0.5397 142 7 -7.88 -1.1941 MIMAT0011787 dme-miR-2280* 31680 Hira agucAAUCGAACCUUCAUUUaa ||| || | |||||| aucaUUAAAUUUG-AGUAAAga 3 19 138 158 [dm3:X:7619916-7619936:+] 0.5397 132 0 -5.92 -0.1085 MIMAT0011787 dme-miR-2280* 31680 Hira agucaaucgaaccuuCAUUUAa |||||| agaaacuccaguuauGUAAAUc 2 8 119 140 [dm3:X:7619897-7619918:+] 0.5397 120 6 -6.97 -0.2309 MIMAT0012211 dme-miR-2498 31680 Hira uuCAUUCUGCCCUUACGGUCAAa |||||| || |||||| ccGUAAGA----AACUCCAGUUa 2 22 114 132 [dm3:X:7619892-7619910:+] 0.5397 124 6 -12.13 -0.2148 MIMAT0012216 dme-miR-2501 31680 Hira aaUCGG-GUCCGUGA-GGUUUGAAug |||: :| ||::| |||||| uaAGCUAUAAGCGUUAAAAAACUUuu 3 23 51 76 [dm3:X:7619829-7619854:+] 0.5402 132 0 -13.76 -0.1280 MIMAT0000319 dme-miR-263a 31680 Hira cacUUAAGAAGGUCACGGUAAUUg |:|| | : | :|||||| uccAGUUAUGUAA--AUCAUUAAa 2 22 125 146 [dm3:X:7619903-7619924:+] 0.5397 126 6 -11.08 -0.3094 MIMAT0000413 dme-miR-iab-4-3p 31680 Hira caaugcauaugacuuccAUAUGGc |||||| aagcguuaaaaaacuuuUAUACCg 2 8 59 82 [dm3:X:7619837-7619860:+] 0.5397 120 6 -13.31 -0.2787

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Hira RAID00155773 dme-miR-iab-4-3p miRNA MIMAT0000413 Hira mRNA 31680 Prediction 0.1828 Hira RAID01415432 dme-miR-1013-3p miRNA MIMAT0005026 Hira mRNA 31680 Prediction 0.1828 Hira RAID02206797 dme-miR-263a-5p miRNA MIMAT0000319 Hira mRNA 31680 Prediction 0.1828