DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000360 dme-miR-287 31214 CG2924 cacguuugcuaaaAGUUGUGu ||||||| cagccuacaccaaUCAACACc 2 9 47 67 [dm3:X:2159751-2159771:-] 0.5061 140 7 -11.66 -0.5891 MIMAT0005473 dme-miR-959 31214 CG2924 aagUAUUAUGGGGGCUAC-UGUu | |:| || |:|||| ||| aagAGAGU-CCACUGAUGCACAu 2 20 4 25 [dm3:X:2159793-2159814:-] 0.5190 121 0 -14.58 -0.5389 MIMAT0000350 dme-miR-34 31214 CG2924 guGUUGGUCGAUUGGUGUGACGGu || || || ||: ||||||| caCAUCCCGC--ACU-CACUGCCg 2 23 112 132 [dm3:X:2159686-2159706:-] 0.5215 153 7 -24.29 -0.2753 MIMAT0000362 dme-miR-263b 31214 CG2924 cacuuaagagggUCACGGUUc ||||:||| uauugguguaaaAGUGUCAAa 2 10 358 378 [dm3:X:2159440-2159460:-] 0.5453 129 0 -10.95 -0.1504 MIMAT0005487 dme-miR-971 31214 CG2924 aguGACAUUCUUCAUUGUGGUu || | || ||||||| agcCUACACCAAUCAACACCAc 2 20 48 69 [dm3:X:2159749-2159770:-] 0.5061 147 7 -8.85 -0.3389 MIMAT0005520 dme-miR-1000 31214 CG2924 ugACGACACU-GUCCU-GUUAUa || | ||: ||||| ||||| ucUGAUCUGGUCAGGACCAAUAu 2 20 155 177 [dm3:X:2159641-2159663:-] 0.5456 130 0 -20.16 -0.1398 MIMAT0005024 dme-miR-1011 31214 CG2924 gacGCUCG-CUAAACUUGGUUAUu :|| | |:| |:||||||| gucUGAUCUGGUCAGGACCAAUAu 2 21 154 177 [dm3:X:2159641-2159664:-] 0.5456 155 7 -18.39 -0.1637

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG2924 RAID00557607 dme-miR-124-3p miRNA MIMAT0000351 CG2924 mRNA 31214 Prediction 0.1828 CG2924 RAID00650496 dme-miR-133-3p miRNA MIMAT0000340 CG2924 mRNA 31214 Prediction 0.1828 CG2924 RAID01461060 dme-miR-34-5p miRNA MIMAT0000350 CG2924 mRNA 31214 Prediction 0.2202 CG2924 RAID01612253 dme-miR-1000-5p miRNA MIMAT0005520 CG2924 mRNA 31214 Prediction 0.1828 CG2924 RAID01967380 dme-miR-315-5p miRNA MIMAT0000407 CG2924 mRNA 31214 Prediction 0.1828 CG2924 RAID02073573 dme-miR-971-3p miRNA MIMAT0005487 CG2924 mRNA 31214 Prediction 0.2202 CG2924 RAID03329778 dme-miR-263b-5p miRNA MIMAT0000362 CG2924 mRNA 31214 Prediction 0.1828 CG2924 RAID03818222 dme-miR-1011-3p miRNA MIMAT0005024 CG2924 mRNA 31214 Prediction 0.2202