DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005464 dme-miR-iab-4as-3p 31014 Roc1a auUUGCAUAUGACUUACAUAGg || |||||: | || |||| auAAAGUAUAUGGUAUAUAUCa 2 21 654 675 [dm3:X:542610-542631:+] 0.6147 140 0 -9.64 -0.1010 MIMAT0005491 dme-miR-975 31014 Roc1a uauGUCCUACAU-CCUUCA-CAAAu || ||| || | |||| |||| guuCA-GAUAUAUGAAAGUAGUUUc 2 21 496 519 [dm3:X:542452-542475:+] 0.5229 125 0 -6.90 -0.9899 MIMAT0011788 dme-miR-2281* 31014 Roc1a aacguagacGUCGACGUCUAUua :||:| |||||| aauacacauUAGUUACAGAUAug 3 15 630 652 [dm3:X:542586-542608:+] 0.6147 134 0 -12.38 -0.3086 MIMAT0011789 dme-miR-2281 31014 Roc1a cguUAUGACGUCUAUGUCUAu | || :|| ||||||| aauACACAUUAGUUACAGAUa 2 19 630 650 [dm3:X:542586-542606:+] 0.6147 154 7 -14.16 -1.3018 MIMAT0012199 dme-miR-2492 31014 Roc1a aaACUUUCG--AGAGCUGUUUUGUa ||||||: |:||| |||||| uaUGAAAGUAGUUUCGUAAAAACAa 2 22 505 529 [dm3:X:542461-542485:+] 0.5406 144 6 -16.47 -0.1102 MIMAT0012209 dme-miR-2497 31014 Roc1a gaCGUUUGUAACAUUUACAAca |:||| | |||||||| uuGUAAAAA--CUAAAUGUUcu 3 21 564 583 [dm3:X:542520-542539:+] 0.5627 137 0 -9.55 -0.1286 MIMAT0012210 dme-miR-2498* 31014 Roc1a guuUUUAUUCGUAUUGUCGGAAAu :|:|:| | |:::||||||| uucGAGUGAAC-UGGUAGCCUUUa 2 22 123 145 [dm3:X:542079-542101:+] 0.5229 159 7 -17.55 -0.4788 MIMAT0012215 dme-miR-2500 31014 Roc1a gacuccaggUGUGU-GUUUUAGg ||| | ||||||| uucguaaaaACAAAUCAAAAUCa 2 14 517 539 [dm3:X:542473-542495:+] 0.5406 148 7 -10.26 -1.2292 MIMAT0000120 dme-miR-14 31014 Roc1a aucCUCUCUCUUUUUCU-GACu || : | |:||||| ||| gucGAUGCAAAGAAAGAGCUGc 2 19 540 561 [dm3:X:542496-542517:+] 0.5583 122 0 -11.34 -0.9868 MIMAT0000346 dme-miR-282 31014 Roc1a ugUCU-GUUUCGGAUCAUCUCCGAUCUAa :|| ||: |:| : | ||||||| agGGAGCAGCACUUCCCGCAAGCUAGAUg 2 27 33 61 [dm3:X:541989-542017:+] 0.5230 149 7 -17.84 -0.1099 MIMAT0000407 dme-miR-315 31014 Roc1a cgAAAGACUCGUUG-UUAGUUUu |||| | ||| ||||||| agUUUCGUAAAAACAAAUCAAAa 2 21 514 536 [dm3:X:542470-542492:+] 0.5406 159 7 -11.66 -1.1489 MIMAT0000407 dme-miR-315 31014 Roc1a cgaaagacucguuguUAGUUUu |||||| aaguauaugguauauAUCAAAu 2 8 657 678 [dm3:X:542613-542634:+] 0.6147 120 6 -6.83 -0.1567 MIMAT0000412 dme-miR-iab-4-5p 31014 Roc1a aguccUAUGUAAGUCAUAUGCa ||: || ||||||:| cagauAUGAAUAAAGUAUAUGg 2 18 645 666 [dm3:X:542601-542622:+] 0.6147 141 0 -12.29 -0.1691 MIMAT0005477 dme-miR-963 31014 Roc1a cuuUGUUG-GAC-UAUAAAU-GGAACa ::|:| ||| || ||| ||||| aauGUAGCUCUGCUUAGUUAUCCUUGg 2 22 385 411 [dm3:X:542341-542367:+] 0.5229 123 0 -13.50 -0.7291 MIMAT0005496 dme-miR-980 31014 Roc1a auuCGGGAAGU--GUUCCGUCGAu |:::| |: |: ||||||| aauGUUUUGCGGCCGCGGCAGCUu 2 20 599 622 [dm3:X:542555-542578:+] 0.5908 146 7 -16.68 -0.3378

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Roc1a RAID00477380 dme-miR-978-3p miRNA MIMAT0005494 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID00589798 dme-miR-315-5p miRNA MIMAT0000407 Roc1a mRNA 31014 Prediction 0.2202 Roc1a RAID00680762 dme-miR-963-5p miRNA MIMAT0005477 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID00708111 dme-miR-986-5p miRNA MIMAT0005503 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID01543834 dme-miR-282-5p miRNA MIMAT0000346 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID03361746 dme-miR-14-3p miRNA MIMAT0000120 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID03634399 dme-miR-iab-4-5p miRNA MIMAT0000412 Roc1a mRNA 31014 Prediction 0.1828 Roc1a RAID03997199 dme-miR-980-3p miRNA MIMAT0005496 Roc1a mRNA 31014 Prediction 0.2202