DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0005502 dme-miR-985 31666 Atg5 acggGCUGGUAACC-UUG-UAAAc :||::| ||| ||| |||| cuaaUGAUUAAUGGAAACUAUUUu 2 19 446 469 [dm3:X:7208696-7208719:-] 0.4968 125 0 -12.09 -0.9708 MIMAT0005509 dme-miR-991 31666 Atg5 ugaaaGGUUUGAUGUUGAAAuu ::||||| :|||||| uacagUUAAACU-UAACUUUuu 3 18 308 328 [dm3:X:7208837-7208857:-] 0.4922 139 0 -11.31 -0.1137 MIMAT0005018 dme-miR-1005 31666 Atg5 gacGCUUAAUUUCUAAGGUCu | | || |||||||| guuCUAUUUUUCGAUUCCAGc 2 19 102 122 [dm3:X:7209043-7209063:-] 0.4438 150 7 -11.42 -0.2436 MIMAT0005026 dme-miR-1013 31666 Atg5 gcUCAAGCCGUA-UGAAAAua |||| | | |||||| acAGUUAAACUUAACUUUUuu 3 19 309 329 [dm3:X:7208836-7208856:-] 0.4922 129 0 -5.88 -0.1309 MIMAT0005028 dme-miR-1015 31666 Atg5 gacguucucucuacAGGGUCCu ||||||| ucgauuccagcaaaUCCCAGGg 2 9 112 133 [dm3:X:7209032-7209053:-] 0.4438 140 7 -16.25 -0.3315 MIMAT0011784 dme-miR-2279* 31666 Atg5 uuaAAGUGUGUGU-C-UAUAAAUu |||:|:::|: | ||||||| cagUUCGCGUGCGUGUAUAUUUAu 2 20 37 60 [dm3:X:7209105-7209128:-] 0.4286 157 7 -14.46 -0.2903 MIMAT0011784 dme-miR-2279* 31666 Atg5 uuaAAGUGUGUGUCUAUAAAUu | :::|::| ||||||| uaaUCUGUAUGC-UAUAUUUAu 2 20 206 226 [dm3:X:7208939-7208959:-] 0.4438 145 7 -4.83 -0.6778 MIMAT0011791 dme-miR-2283 31666 Atg5 uaacagcauaaguacuAUAAAAg |||||| aaugauuaauggaaacUAUUUUa 2 8 448 470 [dm3:X:7208695-7208717:-] 0.4968 120 6 -5.06 -0.1693 MIMAT0012216 dme-miR-2501 31666 Atg5 aauCGGGUCCGUG-AGGUUUGAAUg ||| | :|| ::||||||| aauGCCAACAUACAGUUAAACUUAa 2 22 298 322 [dm3:X:7208843-7208867:-] 0.4922 152 7 -14.54 -1.2307 MIMAT0000356 dme-miR-285 31666 Atg5 cgUGACUAAAGCUUAC-CACGAu ::| :| || |||| ||||| guGUUCGUGUC-AAUGUGUGCUu 2 21 65 86 [dm3:X:7209079-7209100:-] 0.4362 122 0 -12.96 -0.4734 MIMAT0000362 dme-miR-263b 31666 Atg5 cacuuaagagggucACGGUUc |||||| ccacuaacuaauaaUGCCAAc 2 8 286 306 [dm3:X:7208859-7208879:-] 0.4922 120 6 -10.31 -0.1702 MIMAT0000392 dme-miR-9c 31666 Atg5 agAUGUCGAUCUUAUGGUUUCu ||:| || |||| |||| aaUAUAUAUA-UAUACGAAAGu 2 21 487 507 [dm3:X:7208658-7208678:-] 0.4757 126 0 -7.76 -0.1073 MIMAT0000407 dme-miR-315 31666 Atg5 cgAAAGACUCGUU--GUUAGUUUu |||: | |:| |||||||| uaUUUUAUAUCGACCCAAUCAAAa 2 21 464 487 [dm3:X:7208678-7208701:-] 0.4862 155 7 -9.90 -0.9457 MIMAT0000408 dme-miR-316 31666 Atg5 gcgguCAUUCGCCUUUUUCUgu | |||: |||||| uauacGAAAGUUAUAAAAGAa- 3 18 497 517 [dm3:X:7208648-7208668:-] 0.4757 129 0 -9.72 -0.1143 MIMAT0000409 dme-miR-317 31666 Atg5 ugACCUAUGGUGGUCGACACAAGu || |||:: :: :||||||| cgUGUAUAUUUAUGUUUGUGUUCg 2 23 48 71 [dm3:X:7209094-7209117:-] 0.4286 158 7 -18.03 -0.4411 MIMAT0000412 dme-miR-iab-4-5p 31666 Atg5 aguccUAUGUAAGUCAUAUGCa |||:|| : |||||| caaaaAUAUAUAU-AUAUACGa 2 18 483 503 [dm3:X:7208662-7208682:-] 0.4757 123 6 -10.24 -0.3822 MIMAT0005463 dme-miR-iab-4as-5p 31666 Atg5 gccaUAUGGAAGUCAUAUGCAUu |||: | :| |||||| | aaaaAUAUAUAUA-UAUACGAAa 2 20 484 505 [dm3:X:7208660-7208681:-] 0.4757 125 0 -7.80 -0.1024 MIMAT0005485 dme-miR-969 31666 Atg5 uuuUGA--ACGAAUCACC-UUGAg ||| || ||| ||| |||| cacACUAAUGAUUAAUGGAAACUa 2 19 442 465 [dm3:X:7208700-7208723:-] 0.4968 125 0 -8.67 -1.2523 MIMAT0005506 dme-miR-989 31666 Atg5 caAGGUGA-UGCAGUGUAGUGu | |||| | | ||||||| gaUACACUAAAAUGACAUCACg 2 20 419 440 [dm3:X:7208725-7208746:-] 0.4968 154 7 -19.17 -0.5568 MIMAT0005507 dme-miR-137 31666 Atg5 gaUGCACAUAAGAGUUCG-UUAu |: ||| | |:|||| ||| auAUAUGUCUAGUUAAGCUAAUc 2 21 188 210 [dm3:X:7208955-7208977:-] 0.4438 124 0 -8.91 -0.8414

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Atg5 RAID00262831 dme-miR-989-3p miRNA MIMAT0005506 Atg5 mRNA 31666 Prediction 0.2202 Atg5 RAID00343755 dme-miR-137-3p miRNA MIMAT0005507 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID00491808 dme-miR-9c-5p miRNA MIMAT0000392 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID00697335 dme-miR-iab-4-5p miRNA MIMAT0000412 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID00790250 dme-miR-1003-3p miRNA MIMAT0005016 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID00849462 dme-miR-iab-8-5p miRNA MIMAT0005463 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID01246281 dme-miR-317-3p miRNA MIMAT0000409 Atg5 mRNA 31666 Prediction 0.2202 Atg5 RAID01268209 dme-mir-iab-4 miRNA MI0000432 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID01362329 dme-miR-1015-3p miRNA MIMAT0005028 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID02478913 dme-miR-316-5p miRNA MIMAT0000408 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID02577608 dme-miR-277-3p miRNA MIMAT0000338 Atg5 mRNA 31666 Prediction 0.2202 Atg5 RAID03079609 dme-miR-263b-5p miRNA MIMAT0000362 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID03153046 dme-miR-1005-3p miRNA MIMAT0005018 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID03193248 dme-miR-285-3p miRNA MIMAT0000356 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID03338650 dme-miR-315-5p miRNA MIMAT0000407 Atg5 mRNA 31666 Prediction 0.2202 Atg5 RAID03678411 dme-miR-969-5p miRNA MIMAT0005485 Atg5 mRNA 31666 Prediction 0.1828 Atg5 RAID04028994 dme-miR-1004-3p miRNA MIMAT0005017 Atg5 mRNA 31666 Prediction 0.1828