DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 34699 CG9934 auAGUA-AAGUAUACGUUGCAUUUAUGu || | | ||||| ||: ||||||: uaUCUUCUACAUAU-AAAUAUAAAUAUu 2 26 68 94 [dm3:2L:13013521-13013547:-] 0.5877 150 0 -9.03 -0.1174 MIMAT0000364 dme-miR-289 34699 CG9934 ucagcguccgaggUGAAUUUAUAAau |: |||||||| cuucuacauauaaAUAUAAAUAUUcu 3 14 71 96 [dm3:2L:13013519-13013544:-] 0.5877 133 0 -6.98 -0.1478 MIMAT0000364 dme-miR-289 34699 CG9934 ucagcguccgaggugaaUUUAUAAau ||||||| uaauuuagauguuugaaAAAUAUUga 3 10 192 217 [dm3:2L:13013398-13013423:-] 0.5877 125 0 -9.50 -0.4540 MIMAT0005481 dme-miR-966 34699 CG9934 ggUGUGUCGGGUGUUGGGUGu :|:|| ||: :||||||: ucGCGCACCCUUUAACCCAUa 2 20 2 22 [dm3:2L:13013593-13013613:-] 0.5877 147 0 -28.63 -0.1965 MIMAT0005498 dme-miR-982 34699 CG9934 uaaAUGAAGUAUAAACAGGUCCu || | | ||||| |||| auaUAAAUAUUCUUUGUGCAGGa 2 21 84 106 [dm3:2L:13013509-13013531:-] 0.5877 128 0 -14.63 -0.1244 MIMAT0000319 dme-miR-263a 34699 CG9934 cacuuaagaagGUC-ACGGUAAUUg ||| | ||||||| ccugcaaguagCAGUUACCAUUAAu 2 14 143 167 [dm3:2L:13013448-13013472:-] 0.5877 148 7 -13.15 -0.6795 MIMAT0000396 dme-let-7 34699 CG9934 ugAUAUGUU-GGAU----GAUGGAgu |:|:||: ::|| |||||| aaUGUGCAGUUUUAGUGUCUACCUau 3 20 45 70 [dm3:2L:13013545-13013570:-] 0.5877 125 0 -16.80 -0.1079 MIMAT0005467 dme-miR-190 34699 CG9934 guuGGUUCUUAUAGUUUGUAUAga |:| || |: |||||| uguCUACCUAUCUUCUACAUAUaa 3 22 60 83 [dm3:2L:13013532-13013555:-] 0.5877 129 0 -8.28 -0.3562 MIMAT0005504 dme-miR-987 34699 CG9934 guaguuaggucugaUAAAUGAAau |||||||| auuuaaaaaauuaaAUUUACUUgc 3 11 300 323 [dm3:2L:13013292-13013315:-] 0.4962 130 0 -5.38 -0.1384 MIMAT0005016 dme-miR-1003 34699 CG9934 gacaCUUAUACAUUUACAC-UCu || || | |||||| || uuagGACUAGUUUAAUGUGCAGu 2 19 32 54 [dm3:2L:13013561-13013583:-] 0.5877 122 0 -9.18 -1.1630 MIMAT0005027 dme-miR-1014 34699 CG9934 gacGUUUACUUUUACUUAAaa :||| | |||||||| aaaUAAAAAAUAAUGAAUUau 3 19 336 356 [dm3:2L:13013259-13013279:-] 0.4962 142 0 -6.04 -0.4189

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG9934 RAID00717855 dme-miR-987-5p miRNA MIMAT0005504 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID00745782 dme-miR-263a-5p miRNA MIMAT0000319 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID00802584 dme-miR-14-3p miRNA MIMAT0000120 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID01740262 dme-let-7-5p miRNA MIMAT0000396 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02006255 dme-mir-13b-1 miRNA MI0000134 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02043464 dme-miR-11-3p miRNA MIMAT0000116 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02153776 dme-mir-2a-1 miRNA MI0000117 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02217043 dme-miR-1003-3p miRNA MIMAT0005016 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02930774 dme-miR-1014-3p miRNA MIMAT0005027 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID02977076 dme-miR-306-5p miRNA MIMAT0000393 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID03793156 dme-miR-34-5p miRNA MIMAT0000350 CG9934 mRNA 34699 Prediction 0.1828 CG9934 RAID03964128 dme-miR-190-5p miRNA MIMAT0005467 CG9934 mRNA 34699 Prediction 0.1828