DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 35485 d4 auAGUAAAGUAUACGUUGCAUUUAUGu | | || || | | | ||||||: uaUAAGUUAAUCUUC-UCAUAAAUAUa 2 26 31 56 [dm3:2R:1183430-1183455:+] 0.3974 139 0 -5.96 -0.1184 MIMAT0000343 dme-miR-280 35485 d4 auAGUAAAGUAUACGUUGCAUUUAUGu | | || || | | | ||||||: uaUAAGUUAAUCUUC-UCAUAAAUAUa 2 26 31 56 [dm3:2R:1183430-1183455:+] 0.3974 139 0 -5.96 -0.1973 MIMAT0011790 dme-miR-2282 35485 d4 uaagaUAAAAAUCGAGUGGCUa ||| || :||||| | gcuacAUUAAUAAUUCACCAAu 2 18 9 30 [dm3:2R:1183408-1183429:+] 0.3974 125 0 -8.81 -0.1577 MIMAT0000319 dme-miR-263a 35485 d4 cacuuaagaaggucacgGUAAUUg |||||| -----gcuaauaagcuaCAUUAAu 2 8 1 19 [dm3:2R:1183400-1183418:+] 0.5895 120 6 -7.18 -0.1251 MIMAT0000319 dme-miR-263a 35485 d4 cacuuaagaaggucacgGUAAUUg |||||| -----gcuaauaagcuaCAUUAAu 2 8 1 19 [dm3:2R:1183400-1183418:+] 0.5895 120 6 -7.18 -0.2519 MIMAT0005504 dme-miR-987 35485 d4 guagUUAGGUCUGAUAAAUGAAau || |: || ||||||| auaaAAAACGUACAUUUUACUUg- 3 21 54 76 [dm3:2R:1183453-1183475:+] 0.3974 136 0 -6.45 -0.1397 MIMAT0005024 dme-miR-1011 35485 d4 gacgcucgcuaaacuUGGUUAuu |||||| cuacauuaauaauucACCAAUua 3 9 10 32 [dm3:2R:1183409-1183431:+] 0.3974 120 0 -5.56 -0.2181

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score d4 RAID00244738 dme-miR-252-5p miRNA MIMAT0005516 d4 mRNA 35485 Prediction 0.1828 d4 RAID00355276 dme-miR-1011-3p miRNA MIMAT0005024 d4 mRNA 35485 Prediction 0.1828 d4 RAID03239644 dme-miR-987-5p miRNA MIMAT0005504 d4 mRNA 35485 Prediction 0.1828 d4 RAID03463041 dme-miR-263a-5p miRNA MIMAT0000319 d4 mRNA 35485 Prediction 0.1828 d4 RAID03817667 dme-miR-1002-5p miRNA MIMAT0005483 d4 mRNA 35485 Prediction 0.1828