DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0012198 dme-miR-2491 36769 casp ucguUGACGUU--UCCGUU-GUCGc ||| :|| | |||| |||| acguACUAUAAUUAAGCAAGCAGCa 2 19 87 111 [dm3:2R:11912370-11912394:-] 0.4742 121 0 -12.22 -0.9495 MIMAT0000120 dme-miR-14 36769 casp auCCUCUCUCUUUUUC-UGACu | ||||| |:|||| |||| aaGAAGAGAAAGAAAGUACUGc 2 20 323 344 [dm3:2R:11912137-11912158:-] 0.5557 139 0 -18.41 -1.1310 MIMAT0000338 dme-miR-277 36769 casp acagcauggUCUAUCACGUAAAu | :|| ||||||| agagaaagaAAGUACUGCAUUUa 2 15 327 349 [dm3:2R:11912132-11912154:-] 0.6544 150 7 -10.11 -1.1999 MIMAT0000338 dme-miR-277 36769 casp acAGCAUGGUCUAUCACGUAAau | | ::|| | |||||| auUGGGUUUAGUUUUUGCAUUaa 3 22 33 55 [dm3:2R:11912426-11912448:-] 0.4742 129 0 -9.81 -0.1427 MIMAT0000413 dme-miR-iab-4-3p 36769 casp caaugcauaugacuuccAUAUGGc |||||| caccacauacauacauaUAUACCu 2 8 133 156 [dm3:2R:11912325-11912348:-] 0.4742 120 6 -6.54 -0.1391 MIMAT0005463 dme-miR-iab-4as-5p 36769 casp gccAUAUGGAAGUCAUAUGCAUu | ||||| :| | |||||| agaUCUACCUAUAAUUUACGUAc 2 21 70 92 [dm3:2R:11912389-11912411:-] 0.4742 140 6 -11.47 -0.1243 MIMAT0005487 dme-miR-971 36769 casp agUGACAUU-C-UUC--AU-UGUGGUu ||| ||| | ||| || |||||| acACUUUAACGAAAGCAUACACACCAc 2 21 112 138 [dm3:2R:11912343-11912369:-] 0.4742 125 6 -13.91 -1.1072 MIMAT0005492 dme-miR-976 36769 casp cgUAACUACUAU-UGAUUAGGUu | | | ||| | ||||||| auACUAAACAUAGAAUAAUCCAa 2 21 206 228 [dm3:2R:11912253-11912275:-] 0.4656 151 7 -10.16 -1.0672 MIMAT0005493 dme-miR-977 36769 casp aaucuguUGCACUUAUAGAgu :| | ||||||| aguuuuuGCAUUAAUAUCUga 3 15 42 62 [dm3:2R:11912419-11912439:-] 0.4742 130 0 -6.15 -0.1891 MIMAT0005504 dme-miR-987 36769 casp guaguuAGGUCUGAUAAAUGAAAu |:| | || ||||||| ------UUCCG-CUUGUUACUUUa 2 19 1 17 [dm3:2R:11912464-11912480:-] 0.5553 148 7 -11.16 -1.2997

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score casp RAID00084723 dme-miR-977-3p miRNA MIMAT0005493 casp mRNA 36769 Prediction 0.1828 casp RAID00951158 dme-miR-976-3p miRNA MIMAT0005492 casp mRNA 36769 Prediction 0.2202 casp RAID01288080 dme-miR-991-3p miRNA MIMAT0005509 casp mRNA 36769 Prediction 0.1828 casp RAID01681695 dme-mir-2a-1 miRNA MI0000117 casp mRNA 36769 Prediction 0.1828 casp RAID01906535 dme-miR-iab-8-5p miRNA MIMAT0005463 casp mRNA 36769 Prediction 0.1828 casp RAID01922402 dme-mir-307a miRNA MI0000418 casp mRNA 36769 Prediction 0.1828 casp RAID02130276 dme-miR-11-3p miRNA MIMAT0000116 casp mRNA 36769 Prediction 0.1828 casp RAID02143557 dme-miR-274-5p miRNA MIMAT0000332 casp mRNA 36769 Prediction 0.1828 casp RAID02376196 dme-let-7-5p miRNA MIMAT0000396 casp mRNA 36769 Prediction 0.1828 casp RAID02587296 dme-mir-13b-1 miRNA MI0000134 casp mRNA 36769 Prediction 0.1828 casp RAID02767128 dme-miR-iab-4-3p miRNA MIMAT0000413 casp mRNA 36769 Prediction 0.1828 casp RAID02811849 dme-miR-971-3p miRNA MIMAT0005487 casp mRNA 36769 Prediction 0.1828 casp RAID02862548 dme-miR-306-5p miRNA MIMAT0000393 casp mRNA 36769 Prediction 0.1828 casp RAID03376054 dme-miR-14-3p miRNA MIMAT0000120 casp mRNA 36769 Prediction 0.1828 casp RAID03385927 dme-miR-987-5p miRNA MIMAT0005504 casp mRNA 36769 Prediction 0.2202 casp RAID03408979 dme-miR-957-3p miRNA MIMAT0005470 casp mRNA 36769 Prediction 0.1828 casp RAID03617777 dme-miR-277-3p miRNA MIMAT0000338 casp mRNA 36769 Prediction 0.2202