DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000109 dme-miR-4 37467 Rae1 aguuaccaacAGAUCGAAAUa |:|||||||| ggaggacuacUUUAGCUUUAg 2 12 3 23 [dm3:2R:17546325-17546345:-] 0.5108 151 7 -10.94 -0.7281 MIMAT0000352 dme-miR-79 37467 Rae1 uacgaaaccAUUAGAUCGAAAu || |:||||||| ucggaggacUACUUUAGCUUUa 2 14 1 22 [dm3:2R:17546326-17546347:-] 0.5108 153 7 -11.45 -1.1129 MIMAT0005484 dme-miR-968 37467 Rae1 guugggaaauuaCCU-AUGAUGAAu ||| ||||||| ----------ucGGAGGACUACUUu 2 13 1 15 [dm3:2R:17546333-17546347:-] 0.5108 143 7 -12.22 -0.4048 MIMAT0005504 dme-miR-987 37467 Rae1 guaguuaggUCUGAU-AAAU-GAAAu :||||| |||| |||| ----ucggaGGACUACUUUAGCUUUa 2 16 1 22 [dm3:2R:17546326-17546347:-] 0.5108 126 0 -13.62 -0.9434

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Rae1 RAID01028468 dme-miR-1-3p miRNA MIMAT0000105 Rae1 mRNA 37467 Prediction 0.1828 Rae1 RAID01039882 dme-miR-79-3p miRNA MIMAT0000352 Rae1 mRNA 37467 Prediction 0.2202 Rae1 RAID01180913 dme-miR-1017-3p miRNA MIMAT0005030 Rae1 mRNA 37467 Prediction 0.1828 Rae1 RAID01579364 dme-miR-987-5p miRNA MIMAT0005504 Rae1 mRNA 37467 Prediction 0.2202 Rae1 RAID03732812 dme-miR-968-5p miRNA MIMAT0005484 Rae1 mRNA 37467 Prediction 0.2202 Rae1 RAID04023173 dme-miR-4-3p miRNA MIMAT0000109 Rae1 mRNA 37467 Prediction 0.2202