DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000364 dme-miR-289 42209 CG7671 ucagcguccGAGGUGA-AU-UUAUAAAu || |:| || ||||||| auuccuuacCUAAAUUAUAUAAUAUUUc 2 18 17 44 [dm3:3R:14193600-14193627:+] 0.3611 147 7 -5.04 -1.0716 MIMAT0000388 dme-miR-303 42209 CG7671 uggucaaaggacacuuUGGAUUu |||||| gccuuuugaauuccuuACCUAAa 2 8 8 30 [dm3:3R:14193591-14193613:+] 0.5342 120 6 -13.13 -0.9276 MIMAT0005500 dme-miR-984 42209 CG7671 uuuAAGGUUGGCAUAAAUGGAgu ||:::| : | |||||| gccUUUUGAAU-UCCUUACCUaa 3 21 8 29 [dm3:3R:14193591-14193612:+] 0.5342 126 0 -10.71 -0.3376 MIMAT0005022 dme-miR-1009 42209 CG7671 gacuuUACAUUGUUAAAAACUcu |||| | : |||||| -----AUGUCAAGCCUUUUGAau 3 19 1 18 [dm3:3R:14193584-14193601:+] 0.5342 134 0 -5.02 -0.1055 MIMAT0012210 dme-miR-2498* 42209 CG7671 guuuuuauucgUAUUG-UCGGAAAu ||: | ||||||| -----------AUGUCAAGCCUUUu 2 14 1 14 [dm3:3R:14193584-14193597:+] 0.6152 144 7 -9.36 -0.9006 MIMAT0012214 dme-miR-2500* 42209 CG7671 ccauaacauauACACACAAGGAAUg | || ||||||| augucaagccuUUUGAAUUCCUUAc 2 15 1 25 [dm3:3R:14193584-14193608:+] 0.5342 146 7 -12.03 -0.9440 MIMAT0000110 dme-miR-5 42209 CG7671 guauaguguugcuagcAAGGAAa |||||| ugucaagccuuuugaaUUCCUUa 2 8 2 24 [dm3:3R:14193585-14193607:+] 0.5342 120 6 -9.97 -0.1380 MIMAT0000347 dme-miR-283 42209 CG7671 ucUUAAUGGUCGACUAUAAAu ||||| :| | |||||| uaAAUUA-UA--UAAUAUUUc 2 20 27 44 [dm3:3R:14193610-14193627:+] 0.3611 122 6 -2.83 -0.1573 MIMAT0005476 dme-miR-962 42209 CG7671 cugucguAGUUAAAGAGAUGGAAUa |::| ||| :||||| | aagccuuUUGAAUUCCUUACCUAAa 2 19 6 30 [dm3:3R:14193589-14193613:+] 0.5342 130 0 -10.06 -0.5384 MIMAT0005513 dme-miR-994 42209 CG7671 uaGUGCCGAUGA-UAAAGGAAUc || | || :| | ||||||| guCAAGCCUUUUGAAUUCCUUAc 2 21 3 25 [dm3:3R:14193586-14193608:+] 0.5342 155 7 -10.17 -0.9472 MIMAT0005027 dme-miR-1014 42209 CG7671 gacguuuacuuuuACUUAAaa |||||| augucaagccuuuUGAAUUcc 3 9 1 21 [dm3:3R:14193584-14193604:+] 0.5342 120 0 -5.79 -0.1333

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Nup43 RAID00229295 dme-miR-283-5p miRNA MIMAT0000347 Nup43 mRNA 42209 Prediction 0.1828 Nup43 RAID02001752 dme-miR-1014-3p miRNA MIMAT0005027 Nup43 mRNA 42209 Prediction 0.1828 Nup43 RAID02590258 dme-miR-994-5p miRNA MIMAT0005513 Nup43 mRNA 42209 Prediction 0.2202 Nup43 RAID03037885 dme-miR-962-5p miRNA MIMAT0005476 Nup43 mRNA 42209 Prediction 0.1828 Nup43 RAID03822131 dme-miR-5-5p miRNA MIMAT0000110 Nup43 mRNA 42209 Prediction 0.2202