DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000330 dme-miR-184* 42397 CG4973 gccccgcucucuuACUAUUCc ||||||| gaaaaauauauuuUGAUAAGu 2 9 211 231 [dm3:3R:15884985-15885005:+] 0.4895 140 7 -5.49 -1.2622 MIMAT0000364 dme-miR-289 42397 CG4973 ucagcguccgaggugaauUUAUAAAu ||||||| ------------------AAUAUUUu 2 9 1 8 [dm3:3R:15884775-15884782:+] 0.4932 140 7 -5.19 -0.8511 MIMAT0000364 dme-miR-289 42397 CG4973 ucagcguccgAGGUGAAUUUA-UAAAu |:: :|||||| |||| ------aauaUUUUUUUAAAUCAUUUa 2 17 1 21 [dm3:3R:15884775-15884795:+] 0.4932 124 0 -5.49 -1.0074 MIMAT0005488 dme-miR-972 42397 CG4973 cggAUUUAUAAGCAUAACAUGu |||| :| | ||||||| aagUAAA-GUAAGGAUUGUACc 2 20 107 127 [dm3:3R:15884881-15884901:+] 0.4895 153 7 -8.15 -0.1920 MIMAT0005022 dme-miR-1009 42397 CG4973 gaCUUUACAUUGUUAAAAACUcu |||| ||:| |||||| uaGAAA---AAUAUAUUUUGAua 3 22 209 228 [dm3:3R:15884983-15885002:+] 0.4895 133 0 -4.37 -0.2331 MIMAT0011784 dme-miR-2279* 42397 CG4973 uuaaaGUGUGUGUCUAUAAAuu :| | | | |||||| guaacUAGAAAAAUAUAUUUug 3 18 204 225 [dm3:3R:15884978-15884999:+] 0.4895 129 0 -1.44 -0.1341 MIMAT0011787 dme-miR-2280* 42397 CG4973 agucaaUCGA-ACCUUCAUUUAa :|:| || |||||||| uauacaGGUUGUGAAAGUAAAUa 2 17 20 42 [dm3:3R:15884794-15884816:+] 0.4914 155 7 -11.66 -1.0961 MIMAT0011791 dme-miR-2283 42397 CG4973 uaacagcauaagUACUAUAAAAg || ||||||| guaacuagaaaaAU-AUAUUUUg 2 12 204 225 [dm3:3R:15884978-15884999:+] 0.4895 141 7 -1.48 -1.0728 MIMAT0011791 dme-miR-2283 42397 CG4973 uaacagcauaaguacUAUAAAAg ||||||| --------------aAUAUUUUu 2 9 1 9 [dm3:3R:15884775-15884783:+] 0.4932 140 7 -2.97 -0.8417 MIMAT0000398 dme-miR-307 42397 CG4973 gaGUGAGUUCCUCCAACACu ||:|:| |||||||| auCAUUUAUACAGGUUGUGa 2 19 14 33 [dm3:3R:15884788-15884807:+] 0.4914 158 7 -21.63 -1.2577 MIMAT0005511 dme-miR-929 42397 CG4973 guuagacugaggcaAUCCCUc |||||| guugugaaaguaaaUAGGGAc 2 8 27 47 [dm3:3R:15884801-15884821:+] 0.4914 120 6 -9.51 -0.1068 MIMAT0005024 dme-miR-1011 42397 CG4973 gacgcucgCUAAACUUGGUUAUu | ||| |||||| | uuugauaaGUUUUCAACCAAGAa 2 16 222 244 [dm3:3R:15884996-15885018:+] 0.4895 127 0 -7.69 -0.1437

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score mdlc RAID00424722 dme-miR-284-3p miRNA MIMAT0000348 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID01500805 dme-miR-1011-3p miRNA MIMAT0005024 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID01761935 dme-mir-307a miRNA MI0000418 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID01765297 dme-miR-929-3p miRNA MIMAT0005511 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID01801824 dme-miR-972-3p miRNA MIMAT0005488 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID02089758 dme-miR-305-5p miRNA MIMAT0000391 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID02578968 dme-miR-278-3p miRNA MIMAT0000339 mdlc mRNA 42397 Prediction 0.1828 mdlc RAID04023764 dme-miR-307a-3p miRNA MIMAT0000398 mdlc mRNA 42397 Prediction 0.1828