DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000343 dme-miR-280 42690 CG4813 auAGUAAAGUAUACGUUGCAUUUAUGu |:|||| |||| | : |||||| uaUUAUUU-AUAUAGAUUACAAAUACc 2 26 99 124 [dm3:3R:18550671-18550696:-] 0.5703 139 6 -8.52 -0.4109 MIMAT0011784 dme-miR-2279* 42690 CG4813 uuaaaGUGUGUGUCUAUAAAUu :|:|||:| |||||| uccccUAUACAUA-UUAUUUAu 2 18 88 108 [dm3:3R:18550687-18550707:-] 0.5398 127 6 -9.48 -0.1364 MIMAT0012196 dme-miR-2489 42690 CG4813 ugACGUUU-AUGUUGUAU-GUUAu | :|:| ||||| ||| |||| uaUAUAGAUUACAA-AUACCAAUu 2 21 106 128 [dm3:3R:18550667-18550689:-] 0.5703 125 0 -7.44 -1.2283 MIMAT0012196 dme-miR-2489 42690 CG4813 ugACGUUUAUGUUGUAUGU-UAu || ||| | :||||| || gaUGAUAAUCCCCUAUACAUAUu 2 21 80 102 [dm3:3R:18550693-18550715:-] 0.5398 120 0 -5.72 -1.1320 MIMAT0012196 dme-miR-2489 42690 CG4813 ugacguuuauguuguAUGUUAu |||||| uauacuacgugacauUACAAUa 2 8 128 149 [dm3:3R:18550646-18550667:-] 0.5703 120 6 -11.94 -0.1024 MIMAT0000109 dme-miR-4 42690 CG4813 aguuaccaacagaUCGAAAUa ||||||| ugcaucccgacgcAGCUUUAg 2 9 60 80 [dm3:3R:18550715-18550735:-] 0.5093 140 7 -7.23 -0.2946 MIMAT0000334 dme-miR-92a 42690 CG4813 uauccggcccuguucACGUUAc |||||| cuaccauguaacuauUGCAAUa 2 8 153 174 [dm3:3R:18550621-18550642:-] 0.5703 120 6 -6.93 -0.1793 MIMAT0000358 dme-miR-92b 42690 CG4813 cguccggcccUGAUCACGUUAa |||| |||||| cuaccauguaACUAUUGCAAUa 2 13 153 174 [dm3:3R:18550621-18550642:-] 0.5703 128 6 -11.20 -0.1793 MIMAT0000362 dme-miR-263b 42690 CG4813 cacuUAAGAGGGUC-ACGGUUc :|| |||| | |||||| acuuGUUAUCCCCGCUGCCAAa 2 18 14 35 [dm3:3R:18550760-18550781:-] 0.5093 129 6 -16.77 -0.9858 MIMAT0000402 dme-miR-310 42690 CG4813 uuuccggcccuucacACGUUAu |||||| cuaccauguaacuauUGCAAUa 2 8 153 174 [dm3:3R:18550621-18550642:-] 0.5703 120 6 -8.80 -0.1793 MIMAT0000403 dme-miR-311 42690 CG4813 aguccggccacuuacACGUUAu |||||| cuaccauguaacuauUGCAAUa 2 8 153 174 [dm3:3R:18550621-18550642:-] 0.5703 120 6 -8.41 -0.1793 MIMAT0000404 dme-miR-312 42690 CG4813 aguccggcagaguucACGUUAu |||||| cuaccauguaacuauUGCAAUa 2 8 153 174 [dm3:3R:18550621-18550642:-] 0.5703 120 6 -9.71 -0.1776 MIMAT0000405 dme-miR-313 42690 CG4813 agcccgACACUUUUCACGUUAu ||| | | |||||| cuaccaUGUAACUAUUGCAAUa 2 17 153 174 [dm3:3R:18550621-18550642:-] 0.5703 124 6 -7.71 -0.1759 MIMAT0005467 dme-miR-190 42690 CG4813 guugGUUCUUAUAG--UUUGUAUAGa ::| ||| | | ||||||: uagaUGAUAAUCCCCUAUACAUAUUa 2 21 78 103 [dm3:3R:18550692-18550717:-] 0.5398 131 0 -4.41 -0.2633 MIMAT0005487 dme-miR-971 42690 CG4813 aguGACAU-UCU--UCAUUGUGGUu :| || ||| | ||:|||| uauUUAUAUAGAUUACAAAUACCAa 2 20 102 126 [dm3:3R:18550669-18550693:-] 0.5703 129 0 -9.55 -0.1465 MIMAT0005492 dme-miR-976 42690 CG4813 cguAACUACUAUUGAUUAGGuu || | |||:| |||||| agcUUUA-GAUGA-UAAUCCcc 3 20 73 92 [dm3:3R:18550703-18550722:-] 0.5093 135 0 -11.94 -0.1072 MIMAT0005024 dme-miR-1011 42690 CG4813 gacgcucgCUAAACU---UGGUUAuu |||| | |||||| uuuauauaGAUUACAAAUACCAAUua 3 16 104 129 [dm3:3R:18550666-18550691:-] 0.5703 122 0 -7.23 -0.3876

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score CG4813 RAID00054504 dme-miR-310-3p miRNA MIMAT0000402 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID00300012 dme-miR-311-3p miRNA MIMAT0000403 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID00520980 dme-miR-79-3p miRNA MIMAT0000352 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID00525611 dme-miR-190-5p miRNA MIMAT0005467 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID00534885 dme-miR-1000-5p miRNA MIMAT0005520 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID00575819 dme-miR-312-3p miRNA MIMAT0000404 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID00855270 dme-miR-4-3p miRNA MIMAT0000109 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID00875607 dme-miR-313-3p miRNA MIMAT0000405 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID01003996 dme-miR-971-3p miRNA MIMAT0005487 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID01888982 dme-miR-976-3p miRNA MIMAT0005492 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID02239982 dme-miR-263b-5p miRNA MIMAT0000362 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID02481525 dme-miR-989-3p miRNA MIMAT0005506 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID02752834 dme-miR-1011-3p miRNA MIMAT0005024 CG4813 mRNA 42690 Prediction 0.1828 CG4813 RAID03225394 dme-miR-92b-3p miRNA MIMAT0000358 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID03495543 dme-miR-92a-3p miRNA MIMAT0000334 CG4813 mRNA 42690 Prediction 0.2202 CG4813 RAID03924110 dme-miR-1017-3p miRNA MIMAT0005030 CG4813 mRNA 42690 Prediction 0.1828