DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015115 cel-miR-239b* 172268 air-2 aaaaacgUGUGGUGUUUUCACg |: ::| ||||||| acuagaaAUUUUA-AAAAGUGa 2 16 73 93 [ce6:I:5938764-5938784:+] 0.4665 141 7 -8.13 -1.2001 MIMAT0015119 cel-miR-247* 172268 air-2 ccAUUAAUCUUUG---AAAAGAGAu | | | |||: ||||||:| auUCAACAUAAAUUUAUUUUCUUU- 2 21 169 192 [ce6:I:5938860-5938883:+] 0.4961 131 0 -6.47 -0.1566 MIMAT0005031 cel-miR-1018 172268 air-2 gacauucAGGUUACUAGAG-AGa |:|||| ||||| || uccuucuUUCAAUCAUCUCGUCu 2 16 20 42 [ce6:I:5938711-5938733:+] 0.4665 127 0 -13.08 -0.7201 MIMAT0005031 cel-miR-1018 172268 air-2 gaCAUUCAGGUUACUAGAG-AGa || | : || |||||| || cuGUCAAAUAAAGGAUCUCAUCa 2 21 45 67 [ce6:I:5938736-5938758:+] 0.4665 120 0 -12.60 -1.1135 MIMAT0006586 cel-miR-1819 172268 air-2 agGUAG-UUCGAGUUAGUAAGgu |:|| || | || |||||| auCGUCUAACCCCAUUCAUUCaa 3 21 152 174 [ce6:I:5938843-5938865:+] 0.4961 143 0 -13.54 -0.1727 MIMAT0006776 cel-miR-1834 172268 air-2 aaccuagaguuaccaaCUAGAGa |||||| ugucugucaaauaaagGAUCUCa 2 8 42 64 [ce6:I:5938733-5938755:+] 0.4665 120 6 -12.07 -0.2078 MIMAT0011432 cel-miR-2209a 172268 air-2 acaucacauuggcgaCUAGAGa |||||| gucugucaaauaaagGAUCUCa 2 8 43 64 [ce6:I:5938734-5938755:+] 0.4665 120 6 -8.29 -0.2097 MIMAT0011444 cel-miR-2214 172268 air-2 uugcggcCAGUUCA-ACAACAGUUac || || | ||||||| uuaaaaaGUGAAAUAACUUGUCAAcc 3 19 83 108 [ce6:I:5938774-5938799:+] 0.4665 129 0 -6.59 -0.1089 MIMAT0011454 cel-miR-2209b 172268 air-2 acuucguguuggcgAGUAGAGa ||||||| cguccuucuuucaaUCAUCUCg 2 9 18 39 [ce6:I:5938709-5938730:+] 0.4665 140 7 -11.61 -0.7570 MIMAT0011455 cel-miR-2218a 172268 air-2 acuccgaauuuuGAACAUCAAAc | |||||||| caaccaauuuuuCAUGUAGUUUu 2 12 104 126 [ce6:I:5938795-5938817:+] 0.4665 147 7 -7.47 -1.0250 MIMAT0000030 cel-miR-58 172268 air-2 uaACGGCAUGACUUGCUAGAGu ||:| | | || |||||| ucUGUC-AAAUAAAGGAUCUCa 2 21 44 64 [ce6:I:5938735-5938755:+] 0.4665 126 6 -14.14 -0.2156 MIMAT0000043 cel-miR-71 172268 air-2 agugauggguacAGAAAGu |||||| uuuucccguccuUCUUUCa 2 8 12 30 [ce6:I:5938703-5938721:+] 0.4665 120 6 -15.09 -0.5362 MIMAT0000053 cel-miR-80 172268 air-2 agCCGAAAGUUGA-UUACUAGAGu | || |||| | || |||||| cuGUCUGUCAAAUAAAGGAUCUCa 2 22 41 64 [ce6:I:5938732-5938755:+] 0.4665 140 6 -16.47 -0.2078 MIMAT0000054 cel-miR-81 172268 air-2 ugaucgaaagugcuaCUAGAGu |||||| gucugucaaauaaagGAUCUCa 2 8 43 64 [ce6:I:5938734-5938755:+] 0.4665 120 6 -13.39 -0.2175 MIMAT0000055 cel-miR-82 172268 air-2 ugaccgaaagugcuaCUAGAGu |||||| gucugucaaauaaagGAUCUCa 2 8 43 64 [ce6:I:5938734-5938755:+] 0.4665 120 6 -13.39 -0.2175 MIMAT0000302 cel-miR-246 172268 air-2 cgaggaugggcuuuGUACAUu |||||| gucaaccaauuuuuCAUGUAg 2 8 102 122 [ce6:I:5938793-5938813:+] 0.4665 120 6 -12.24 -0.1319

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score air-2 RAID00651828 cel-miR-58a-3p miRNA MIMAT0000030 air-2 mRNA 172268 Prediction 0.2202 air-2 RAID01986587 cel-miR-82-3p miRNA MIMAT0000055 air-2 mRNA 172268 Prediction 0.2202 air-2 RAID02844725 cel-miR-81-3p miRNA MIMAT0000054 air-2 mRNA 172268 Prediction 0.1828 air-2 RAID03227155 cel-miR-246-3p miRNA MIMAT0000302 air-2 mRNA 172268 Prediction 0.1828 air-2 RAID03568211 cel-miR-71-5p miRNA MIMAT0000043 air-2 mRNA 172268 Prediction 0.1828 air-2 RAID03669497 cel-miR-80-3p miRNA MIMAT0000053 air-2 mRNA 172268 Prediction 0.1828