DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 177989 lgg-2 acGUGG-ACAUGGACGAAGGUAc ||:| | :|| :|||||| caCAUCAAGAGCCGUUUUCCAUc 2 21 1 23 [ce6:IV:10934711-10934733:-] 0.6894 135 6 -14.67 -0.2347 MIMAT0015099 cel-miR-51* 177989 lgg-2 acguggacaUGGACGAAGGUAc |:|| |||||| aauuauuacAUCUUGUUCCAUc 2 14 493 514 [ce6:IV:10934220-10934241:-] 0.5648 121 6 -11.33 -0.1448 MIMAT0015109 cel-miR-81* 177989 lgg-2 agaGUCUAGUGCCACUUUUGGc :| || || |||||||| augUAAAU-AC-CUGAAAACCc 2 20 106 125 [ce6:IV:10934609-10934628:-] 0.5648 147 7 -9.47 -1.0422 MIMAT0015109 cel-miR-81* 177989 lgg-2 agaGUCUAGUGCCACUUUUGGc :| || || |||||||| augUAAAU-AC-CUGAAAACCc 2 20 106 125 [ce6:IV:10934609-10934628:-] 0.5648 147 7 -9.47 -0.9159 MIMAT0015110 cel-miR-84* 177989 lgg-2 cggcucaaucaacUUUGUAACac :||||||| uccuuacugcccuGAACAUUGaa 3 11 424 446 [ce6:IV:10934288-10934310:-] 0.5648 126 0 -8.51 -0.1214 MIMAT0015116 cel-miR-240* 177989 lgg-2 guaagaucagaguuUUAGGAGc ||||||| ugauugcccaaugcAAUCCUCa 2 9 62 83 [ce6:IV:10934651-10934672:-] 0.5648 140 7 -9.25 -0.7087 MIMAT0015116 cel-miR-240* 177989 lgg-2 guAAGAUCAGAGUU--UUAGGAGc |||| || ||| :|||||| ucUUCUUUUCACAACUGAUCCUCu 2 21 331 354 [ce6:IV:10934380-10934403:-] 0.5648 147 6 -13.33 -0.1180 MIMAT0015116 cel-miR-240* 177989 lgg-2 guaagaucagaguuUUAGGAGc ||||||| ugauugcccaaugcAAUCCUCa 2 9 62 83 [ce6:IV:10934651-10934672:-] 0.5648 140 7 -9.25 -0.7402 MIMAT0000313 cel-miR-258 177989 lgg-2 uuuuccUAAGG---AGAGUUUUGg ||||| |||||||| cucgcaAUUCCCCACCUCAAAACu 2 16 177 200 [ce6:IV:10934534-10934557:-] 0.5648 150 7 -14.77 -0.4192 MIMAT0000696 cel-miR-354 177989 lgg-2 uccucgucguuguuUGUUCCa |||||| gagaauguucauucACAAGGa 2 8 584 604 [ce6:IV:10934130-10934150:-] 0.6043 120 6 -11.25 -0.1567 MIMAT0004228 cel-miR-793 177989 lgg-2 agACAGAUUGAU-UCUAUGGAgu | |:||| |: | |||||| uaUUUUUAAAUGUAAAUACCUga 3 21 97 119 [ce6:IV:10934615-10934637:-] 0.5648 139 0 -8.25 -0.2101 MIMAT0004228 cel-miR-793 177989 lgg-2 agACAGAUUGAU-UCUAUGGAgu | |:||| |: | |||||| uaUUUUUAAAUGUAAAUACCUga 3 21 97 119 [ce6:IV:10934615-10934637:-] 0.5648 139 0 -8.25 -0.1557 MIMAT0005522 cel-miR-1021 177989 lgg-2 ggcucCUAAAGUG-UAC--UA-GAGUGAa |||| | | ||| || |||||| ccacuGAUUGCCCAAUGCAAUCCUCACUg 2 21 58 86 [ce6:IV:10934648-10934676:-] 0.5648 126 6 -14.56 -1.1387 MIMAT0005522 cel-miR-1021 177989 lgg-2 ggcucCUAAAGUG-UAC--UA-GAGUGAa |||| | | ||| || |||||| ccacuGAUUGCCCAAUGCAAUCCUCACUg 2 21 58 86 [ce6:IV:10934648-10934676:-] 0.5648 126 6 -14.56 -1.0931 MIMAT0006587 cel-miR-1820 177989 lgg-2 cuuGUAGUAGCUUUUUGUUAGUUuu ||||| | || :|||||| uucCAUCA-C-AAUUCUAAUCAAuu 3 23 17 39 [ce6:IV:10934695-10934717:-] 0.6894 134 0 -9.29 -0.3067 MIMAT0006587 cel-miR-1820 177989 lgg-2 cuuGUAGUAGCUUUUUGUUAGUUuu ||||| | || :|||||| uucCAUCA-C-AAUUCUAAUCAAuu 3 23 17 39 [ce6:IV:10934695-10934717:-] 0.6894 134 0 -9.29 -0.2350 MIMAT0006768 cel-miR-1828 177989 lgg-2 ugauaGUGAAUUUACGAAGGUCa ||| | || ||||||| uucccCACCUCAAAACUUCCAGc 2 19 184 206 [ce6:IV:10934528-10934550:-] 0.5648 158 7 -13.29 -1.0201 MIMAT0011425 cel-miR-2207 177989 lgg-2 gaauAUGUGUCAGAGUUAAGUgu || ||:| :|||||||| ugccUAGACGGAUUCAAUUCAaa 3 20 471 493 [ce6:IV:10934241-10934263:-] 0.5648 151 0 -16.39 -0.1101 MIMAT0011425 cel-miR-2207 177989 lgg-2 gaAUAUGUGUCAGAGUUAAGUGu | |: | | | |: |||||| uaUCUGGAGAAUGUUCAUUCACa 2 22 578 600 [ce6:IV:10934134-10934156:-] 0.6043 125 6 -11.70 -0.1526 MIMAT0011438 cel-miR-2211 177989 lgg-2 aaagaGGAGAUUUA-A--GAUGGACu ::|:||||| | |||||| uuguaUUUUUAAAUGUAAAUACCUGa 2 19 94 119 [ce6:IV:10934615-10934640:-] 0.5648 124 6 -16.94 -0.2653 MIMAT0011438 cel-miR-2211 177989 lgg-2 aaagaGGAGAUUUA-A--GAUGGACu ::|:||||| | |||||| uuguaUUUUUAAAUGUAAAUACCUGa 2 19 94 119 [ce6:IV:10934615-10934640:-] 0.5648 124 6 -16.94 -0.1981 MIMAT0011446 cel-miR-2215 177989 lgg-2 uuugUUGUGCGCGAUGCUAAGa ||| ||: :|||||||| uuuaAAC-CGU-UUACGAUUCu 2 19 365 384 [ce6:IV:10934350-10934369:-] 0.5648 154 7 -18.93 -0.9159 MIMAT0011447 cel-miR-2216 177989 lgg-2 cggAUGGCUGA-AUUUUACAcg | |: ||| |||||||| caaUCCUCACUGUAAAAUGUug 3 19 75 96 [ce6:IV:10934638-10934659:-] 0.5648 141 0 -13.83 -0.2141 MIMAT0011447 cel-miR-2216 177989 lgg-2 cggauggcuGAAUUUUACAcg :|| |||||| auguuguauUUUUAAAUGUaa 3 13 91 111 [ce6:IV:10934623-10934643:-] 0.5648 128 0 -7.71 -0.2399 MIMAT0011447 cel-miR-2216 177989 lgg-2 cggAUGGCUGA-AUUUUACAcg | |: ||| |||||||| caaUCCUCACUGUAAAAUGUug 3 19 75 96 [ce6:IV:10934638-10934659:-] 0.5648 141 0 -13.83 -0.1407 MIMAT0011447 cel-miR-2216 177989 lgg-2 cggauggcuGAAUUUUACAcg :|| |||||| auguuguauUUUUAAAUGUaa 3 13 91 111 [ce6:IV:10934623-10934643:-] 0.5648 128 0 -7.71 -0.1739 MIMAT0011449 cel-miR-1832b* 177989 lgg-2 uuucacccggcucgcUAAGCGAc ||||||| aaaaaagaaacccaaAUUCGCUu 2 9 229 251 [ce6:IV:10934483-10934505:-] 0.5648 140 7 -10.31 -0.8848 MIMAT0011454 cel-miR-2209b 177989 lgg-2 acuucgUGUUGGCGAGUA-GAGa | |||| |||| ||| uaccugAAAACCCAUCAUACUCa 2 17 113 135 [ce6:IV:10934599-10934621:-] 0.5648 120 0 -10.89 -0.5613 MIMAT0011454 cel-miR-2209b 177989 lgg-2 acuucgUGUUGGCGAGUA-GAGa | |||| |||| ||| uaccugAAAACCCAUCAUACUCa 2 17 113 135 [ce6:IV:10934599-10934621:-] 0.5648 120 0 -10.89 -0.6841 MIMAT0011457 cel-miR-2218b 177989 lgg-2 cuuuuACUACAUCA-AACAUCAGa | | || | ||||||| uucgcUUACGUUUUCGUGUAGUCu 2 19 245 268 [ce6:IV:10934466-10934489:-] 0.5648 141 7 -12.28 -0.6547 MIMAT0011458 cel-miR-2218b* 177989 lgg-2 agAGUGAUGUUUGAUGUUUAAa ||::||| :| |||||| caUCGUUAC-UUUUCCAAAUUc 2 21 511 531 [ce6:IV:10934203-10934223:-] 0.5846 126 6 -11.15 -0.2499 MIMAT0011462 cel-miR-2220 177989 lgg-2 gacauucAGGUGUUUGUUAAcu ||||: |||||| gccguuuUCCAU-CACAAUUcu 3 16 11 31 [ce6:IV:10934703-10934723:-] 0.6894 129 0 -8.75 -0.3528 MIMAT0011462 cel-miR-2220 177989 lgg-2 gacauucAGGUGUUUGUUAAcu ||||: |||||| gccguuuUCCAU-CACAAUUcu 3 16 11 31 [ce6:IV:10934703-10934723:-] 0.6894 129 0 -8.75 -0.7807 MIMAT0014446 cel-miR-2953-5p 177989 lgg-2 uaAAAGUGCUU-GUGAAG-ACAu |||| :||| : |||| ||| cgUUUCUUGAAUUUCUUCAUGUc 2 20 310 332 [ce6:IV:10934402-10934424:-] 0.5648 126 0 -12.94 -0.9207 MIMAT0000002 cel-lin-4 177989 lgg-2 agUGUGAACUCCAGAGUCCcu || | | | |||||| aaACCCAUCA-UACUCAGGcg 3 20 120 139 [ce6:IV:10934595-10934614:-] 0.5648 121 0 -12.31 -0.1177 MIMAT0000021 cel-miR-50 177989 lgg-2 ggGUUCUUAUG--GUCUGUAUAgu ||||:| |: || |||||| caCAAGGAGAUCACAUACAUAUau 3 21 597 620 [ce6:IV:10934114-10934137:-] 0.6043 143 0 -14.93 -0.1856 MIMAT0000034 cel-miR-62 177989 lgg-2 gacaUUCGAUCUA----AUGUAUAgu ||| |||| ||||||| ucacAAG-GAGAUCACAUACAUAUau 3 19 596 620 [ce6:IV:10934114-10934138:-] 0.6043 127 0 -9.53 -0.1874 MIMAT0000043 cel-miR-71 177989 lgg-2 agUGAUGGGUA-CAGAAAGu || ||: || |||||| ucACAACUGAUCCUCUUUCa 2 18 339 358 [ce6:IV:10934376-10934395:-] 0.5648 124 6 -14.17 -0.1558 MIMAT0000053 cel-miR-80 177989 lgg-2 agccGAAAGUUGAUUACUA-GAGu ||||: || | |||| ||| ucuuCUUUUCACAACUGAUCCUCu 2 20 331 354 [ce6:IV:10934380-10934403:-] 0.5648 131 0 -11.75 -1.0853 MIMAT0000054 cel-miR-81 177989 lgg-2 ugaucGAAAGUGCU-ACUA-GAGu :|||||| | |||| ||| ucuucUUUUCACAACUGAUCCUCu 2 18 331 354 [ce6:IV:10934380-10934403:-] 0.5648 128 0 -15.28 -1.0901 MIMAT0000055 cel-miR-82 177989 lgg-2 ugaccGAAAGUGCU-ACUA-GAGu :|||||| | |||| ||| ucuucUUUUCACAACUGAUCCUCu 2 18 331 354 [ce6:IV:10934380-10934403:-] 0.5648 128 0 -14.47 -1.0901 MIMAT0000061 cel-miR-90 177989 lgg-2 uccCCGUAAGUUUGUUGUAUAgu || : ||| |: |||||| caaGGAGAUCACAU-ACAUAUau 3 21 599 620 [ce6:IV:10934114-10934135:-] 0.6043 134 0 -9.85 -0.1725 MIMAT0000282 cel-miR-124 177989 lgg-2 accGUAAGUGGCGC-ACGGAAu ||||: :| | |||||| aacCAUUUUUCUAGUUGCCUUu 2 19 142 163 [ce6:IV:10934571-10934592:-] 0.5648 122 6 -12.27 -0.3460 MIMAT0000292 cel-miR-237 177989 lgg-2 ucgacaaGCUCUUAAGAGUCCcu | | || |||||| ugaaaacCCAUCAUACUCAGGcg 3 17 117 139 [ce6:IV:10934595-10934617:-] 0.5648 128 0 -11.81 -0.1189 MIMAT0000768 cel-miR-392 177989 lgg-2 agUAGUGUGCACUA--GCUACUAu || |:| | ||| :|||||| uaAUAAUAAGAGAUGAUGAUGAU- 2 21 623 645 [ce6:IV:10934089-10934111:-] 0.6043 143 6 -10.72 -0.1408

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score lgg-2 RAID00014419 cel-miR-124-3p miRNA MIMAT0000282 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID00271395 cel-miR-50-5p miRNA MIMAT0000021 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID00527933 cel-miR-81-3p miRNA MIMAT0000054 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID00537595 cel-miR-34-5p miRNA MIMAT0000005 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID00671487 cel-miR-90-3p miRNA MIMAT0000061 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID00983426 cel-miR-62 miRNA MIMAT0000034 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID01300589 cel-miR-71-5p miRNA MIMAT0000043 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6478 lgg-2 RAID01385533 cel-miR-80-3p miRNA MIMAT0000053 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID01626870 cel-miR-237-5p miRNA MIMAT0000292 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID01687356 cel-lin-4-5p miRNA MIMAT0000002 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID02085468 cel-miR-392-3p miRNA MIMAT0000768 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308 lgg-2 RAID02917960 cel-miR-265 miRNA MIMAT0000321 lgg-2 mRNA 177989 CLIP-seq 0.5483 lgg-2 RAID03142083 cel-miR-232-3p miRNA MIMAT0000287 lgg-2 mRNA 177989 Prediction 0.1828 lgg-2 RAID03407886 cel-miR-248 miRNA MIMAT0000304 lgg-2 mRNA 177989 Prediction 0.1828 lgg-2 RAID03765687 cel-miR-82-3p miRNA MIMAT0000055 lgg-2 mRNA 177989 CLIP-seq//Prediction 0.6308