DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 173137 par-6 gacaguuaUCUGCCGAGAGAa ||| ||||||| uccccuucAGA--GCUCUCUg 2 14 275 293 [ce6:I:12674309-12674327:+] 0.5000 142 7 -12.08 -0.4540 MIMAT0015097 cel-miR-47* 173137 par-6 ugacaguuaUCUGACGAGAGAa ||| ||||||| uuccccuucAGA--GCUCUCUg 2 14 274 293 [ce6:I:12674308-12674327:+] 0.5000 142 7 -12.87 -0.4540 MIMAT0015107 cel-miR-71* 173137 par-6 cgCUUU--UUGU-CUUAUCACUau |||| ||| | |||||| cuGAAAUUCACAUUAUUAGUGAga 3 20 363 386 [ce6:I:12674397-12674420:+] 0.5000 129 0 -10.36 -0.2850 MIMAT0015109 cel-miR-81* 173137 par-6 agagucuagugccacUUUUGGc |||||| auuuuuucagaaaaaAAAACCa 2 8 28 49 [ce6:I:12674062-12674083:+] 0.4486 120 6 -10.11 -0.1346 MIMAT0015115 cel-miR-239b* 173137 par-6 aaaaacgUGUGGUGUUUU-CACg | ||||||||| ||| gaaaaaaAAACCACAAAAUGUGa 2 16 37 59 [ce6:I:12674071-12674093:+] 0.4486 131 0 -16.26 -0.9506 MIMAT0015115 cel-miR-239b* 173137 par-6 aaaAACGUGUGGUGUUUU-CACg || | |:|| ||||| ||| ccgUUUCUCGCCCCAAAAUGUGc 2 20 224 246 [ce6:I:12674258-12674280:+] 0.5080 131 0 -16.55 -0.3783 MIMAT0015119 cel-miR-247* 173137 par-6 ccaUUAAUCUUUGAAAAGAGAu |||| | : ||||||| ucaAAUUUGUCGGCUUUCUCUu 2 20 167 188 [ce6:I:12674201-12674222:+] 0.5131 151 7 -9.36 -0.4558 MIMAT0015119 cel-miR-247* 173137 par-6 ccAUUAAUCUUUGAAAAGAGau || || :||||||| uuUAUUUUCCCCUUUUUCUCcu 3 21 136 157 [ce6:I:12674170-12674191:+] 0.5131 128 0 -6.80 -0.1690 MIMAT0000315 cel-miR-260 173137 par-6 gaUGUUCUC-AAGCUGUA-GUg |||| || |||||| || ugACAACAGACACGACAUACAa 2 19 333 354 [ce6:I:12674367-12674388:+] 0.5000 121 0 -13.82 -1.0144 MIMAT0000698 cel-miR-356 173137 par-6 acuAAACAAGC--GCAA-CGAGUu ||| |||| | || ||||| uuuUUUUUUCGAACUUUGGCUCAa 2 19 303 326 [ce6:I:12674337-12674360:+] 0.5000 125 0 -11.68 -1.1781 MIMAT0005033 cel-miR-1020 173137 par-6 gacUUUCACAGU--GUCUUAUUa | | | |:| ||||||| uucACAUUAUUAGUGAGAAUAAa 2 19 369 391 [ce6:I:12674403-12674425:+] 0.5000 141 7 -7.62 -1.1792 MIMAT0006587 cel-miR-1820 173137 par-6 cuuguaguagcuuuuuGUUAGUUUu :||||||| uuuuucuccuaauuuuUAAUCAAAu 2 10 148 172 [ce6:I:12674182-12674206:+] 0.5131 141 7 -6.16 -1.1552 MIMAT0015267 cel-miR-1829a* 173137 par-6 auGUUUGUUAAUCUUCAGGGGAa || |||||| |||||| gaCAUACAAUU---UUUCCCCUg 2 22 346 365 [ce6:I:12674380-12674399:+] 0.5000 125 6 -17.56 -0.1972 MIMAT0015267 cel-miR-1829a* 173137 par-6 auguuuguuaaucuucAGGGGAa |||||| cuuaauuuauuuauuuUCCCCUu 2 8 127 149 [ce6:I:12674161-12674183:+] 0.4809 120 6 -11.09 -0.2036 MIMAT0011425 cel-miR-2207 173137 par-6 gaaUAUGUGUCAGAG------UUAAGUGu ||||| |:|| ||||||| gacAUACAAUUUUUCCCCUGAAAUUCACa 2 21 346 374 [ce6:I:12674380-12674408:+] 0.5000 143 7 -13.23 -1.1338 MIMAT0011447 cel-miR-2216 173137 par-6 cgGAUGGCUGAAUUUUACACg :| :|| | |||||||| guUUCUCGCCCCAAAAUGUGc 2 20 226 246 [ce6:I:12674260-12674280:+] 0.5080 155 7 -16.38 -0.3024 MIMAT0011447 cel-miR-2216 173137 par-6 cggaUGGCUGAAUUUUACACg ||| || |||||||| aaaaACC-AC--AAAAUGUGa 2 18 42 59 [ce6:I:12674076-12674093:+] 0.4486 148 7 -11.95 -1.0513 MIMAT0000032 cel-miR-60 173137 par-6 acuugaucuuuuacacGUAUUAu |||||| ugugaccauuuuuauaCAUAAUu 2 8 55 77 [ce6:I:12674089-12674111:+] 0.4486 120 6 -4.61 -0.2113 MIMAT0000059 cel-miR-86 173137 par-6 cuGACAC-CGUUUCGUAAGUGAAu :| || ||| | : ||||||| uuUUUUGCGCACAAUUUUCACUUu 2 22 192 215 [ce6:I:12674226-12674249:+] 0.5106 156 7 -10.54 -1.0455 MIMAT0000059 cel-miR-86 173137 par-6 cuGACA-CCGUUUCGUAAGUGAAu :||| ||| : ||||||| auUUGUCGGCUUUCUCUUCACUUu 2 22 171 194 [ce6:I:12674205-12674228:+] 0.5131 148 7 -14.91 -0.7098 MIMAT0000060 cel-miR-87 173137 par-6 cguguGGACUUUGAAA-CGAGUg ::| :|||||| ||||| uuuuuUUUCGAACUUUGGCUCAa 2 18 304 326 [ce6:I:12674338-12674360:+] 0.5000 129 0 -12.91 -1.1763 MIMAT0000282 cel-miR-124 173137 par-6 accguaaGUGGCGCACGGAAu || :||||||| cucgcccCAAAAUGUGCCUUc 2 15 230 250 [ce6:I:12674264-12674284:+] 0.5080 142 7 -16.14 -0.7049 MIMAT0000749 cel-lsy-6 173137 par-6 gcUUUACGC-----AGAGUAUGUUUu |||||:| |:|:||||| | caAAAUGUGACCAUUUUUAUACAUAa 2 20 50 75 [ce6:I:12674084-12674109:+] 0.4486 126 0 -12.60 -0.1638 MIMAT0004220 cel-miR-785 173137 par-6 agAUGUGUUUUGUUAAGUGAAu |:|:|| ||: ||||||| uuUGCGCACAAU-UUUCACUUu 2 21 195 215 [ce6:I:12674229-12674249:+] 0.5106 158 7 -15.86 -1.0455 MIMAT0004220 cel-miR-785 173137 par-6 agauguguuuuguuAAGUGAAu ||||||| uugucggcuuucucUUCACUUu 2 9 173 194 [ce6:I:12674207-12674228:+] 0.5131 140 7 -8.20 -0.7209

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score par-6 RAID00569267 cel-miR-785-3p miRNA MIMAT0004220 par-6 mRNA 173137 Prediction 0.1828 par-6 RAID00993656 cel-lsy-6-3p miRNA MIMAT0000749 par-6 mRNA 173137 Prediction 0.1828 par-6 RAID01608102 cel-miR-60-3p miRNA MIMAT0000032 par-6 mRNA 173137 Prediction 0.1828 par-6 RAID02130025 cel-miR-124-3p miRNA MIMAT0000282 par-6 mRNA 173137 Prediction 0.2202 par-6 RAID02875782 cel-miR-86-5p miRNA MIMAT0000059 par-6 mRNA 173137 Prediction 0.2202 par-6 RAID03992268 cel-miR-87-3p miRNA MIMAT0000060 par-6 mRNA 173137 Prediction 0.1828