DNA & RNA Element - miRNAMap |
Gene Name | Mature miRNA | Target Start | Target End | miRNA 3-5 | Alignment | Target 5-3 |
pkc-3; aPKC; F09E5.1 | cel-miR-2 | 221 | 246 | CGUGUA---GUUUCGACCGACACUAU | :||| |:|| ||:|||||| | UUACAAUCCCGAAAA-GGUUGUGAUU |
pkc-3; aPKC; F09E5.1 | cel-miR-242 | 380 | 399 | -AGCUUCGUUUCCGGAUGCGUU | |:| :||:||| ||||| | AUUGCGGCGAAGA-CUACGA-- |
pkc-3; aPKC; F09E5.1 | cel-miR-246 | 349 | 380 | -CGAGGAU------GGGCUU--UGUACAUU- | |||| ||:||| |:|||||| | AGCUCAUUCAUUUCCCUGAAAUAUAUGUAAA |
pkc-3; aPKC; F09E5.1 | cel-miR-248 | 420 | 447 | -ACUCGCAAU-AGGCACG-UGCACAUA | ||| | |||| ||||||: | CUGACACUUCUUUUGUGCCACGUGUGG |
pkc-3; aPKC; F09E5.1 | cel-miR-249 | 188 | 218 | CCGUUGCGAGUUUU------CAGGACACU- | ||||| ||| |||:||||: | CGCAACAAUCACUUCUACUCGUCUUGUGGU |
pkc-3; aPKC; F09E5.1 | cel-miR-250 | 228 | 247 | ACGGUUG--UCAACUGACACUAA- | ||:| :|| ||||||| | -CCCGAAAAGGU----UGUGAUUU |
pkc-3; aPKC; F09E5.1 | cel-miR-253 | 78 | 101 | GGAAGGGUGUU----GCGGAUGAUU | |||||: |||| |||: | --AUCCCAUCUCCUUCGCCCACUGU |
pkc-3; aPKC; F09E5.1 | cel-miR-265 | 307 | 333 | UAUGGU-GGGAAGGA------GGGAGU | ||| ||||||: ||:|| | -GACCUCCCCUUCUAAAUACACCUUCU |
pkc-3; aPKC; F09E5.1 | cel-miR-358 | 280 | 297 | CUGGAACUGUCCCUAUGGUUA | |||| :||| ||||| | --ACUUGCUAGGAAUACCU-- |
pkc-3; aPKC; F09E5.1 | cel-miR-46 | 106 | 121 | ACUUCUCUCGCUGAGGUACUGU- | |||: |:|||||| | --------ACGAUACUAUGACAC |
pkc-3; aPKC; F09E5.1 | cel-miR-49 | 418 | 439 | -AGAC-GUCGAAGAGCACCACGAA | |||| || |||||: |||| | AUCUGACA-CUUCUUUU-GUGCC- |
pkc-3; aPKC; F09E5.1 | cel-miR-63 | 121 | 150 | AAAGGUUGAGCGA------AGUCACAGUAU- | |:||||||: ||||| || || | --ACUAACUCGUGGCAUAAUCAGUAUCCUAA |
pkc-3; aPKC; F09E5.1 | cel-miR-67 | 200 | 245 | -AGAUGAGA--AAGAUC--------------CU---CCAACACU | ||||||| || |:| || |||||||| | UUCUACUCGUCUUGUGGUAUCUUACAAUCCCGAAAAGGUUGUGAU |
pkc-3; aPKC; F09E5.1 | cel-miR-74 | 402 | 441 | -ACAUCUGA----CGGUA-------AAGA----ACGGU- | ||||| || ||||| |||| ||||| | AUGUAGUCUCUUCGCCAUCUGACACUUCUUUUGUGCCAC |
pkc-3; aPKC; F09E5.1 | cel-miR-77 | 287 | 310 | ACCUGUC-GAUACCGGACUACUU | ||| ||| ||:|||||| | AGGAAUACCUAAUGCUUGAUGAC |
pkc-3; aPKC; F09E5.1 | cel-miR-784 | 392 | 441 | AGAUGCA---UGCGU---------------CU--------AACACGGU | ||||| |:|:| || |||||||| | ACUACGAUCAAUGUAGUCUCUUCGCCAUCUGACACUUCUUUUGUGCCAC |
pkc-3; aPKC; F09E5.1 | cel-miR-790 | 402 | 441 | -GCGCCAC--AAGCGCU---------------CACGGUUC | :|: || ||||| | |||||| | AUGUAGUCUCUUCGCCAUCUGACACUUCUUUUGUGCCAC- |
pkc-3; aPKC; F09E5.1 | cel-miR-791 | 414 | 441 | ACGGAAUAGACGCCU-------CACGGUUU | ||| ||||| |||||| | CGCC--AUCUGACACUUCUUUUGUGCCAC- |
pkc-3; aPKC; F09E5.1 | cel-miR-793 | 255 | 298 | -AGAC------AGAU--------------UGAUUC-UAUGGAGU | |||| |||| :|||:| |||||| | UUCUGUUAAAAUCUAGACUAUUCAUACUUGCUAGGAAUACCUA- |
pkc-3; aPKC; F09E5.1 | cel-miR-84 | 104 | 131 | -AUGUUAUAA---UGUAUGAUGGAGU- | |||:||| ||| |||| |||: | AUACGAUACUAUGACACACUAACUCGU |
pkc-3; aPKC; F09E5.1 | cel-miR-242 | 381 | 402 | AGCUUCGUUUCCGGAUGC--GUU | |:| :||:|| | ||||| ||| | TTGCGGCGAA-GACTACGATCAA |
pkc-3; aPKC; F09E5.1 | cel-miR-246 | 350 | 378 | CGAG------GAUGGGCUU--UGUACAUU | |||| :| ||:||| |:|||||| | GCTCATTCATTTCCCTGAAATATATGTAA |
pkc-3; aPKC; F09E5.1 | cel-miR-248 | 421 | 446 | ACU-CGCAAUAGGCAC-GUGCACAua | ||| | | |::||| ||||||| | TGACACTTCTTTTGTGCCACGTGTgg |
pkc-3; aPKC; F09E5.1 | cel-miR-250 | 227 | 245 | ACGGUUGUCAACUGACACUAA | | ||:| | |::||||||| | TCCCGAAA--AGGTTGTGATT |
pkc-3; aPKC; F09E5.1 | cel-miR-253 | 81 | 100 | GGAAGGGUGUUGCGGAUGAuu | || ||:| | |||| ||| | CCATCTC-CTTCGCCCACTgt |
pkc-3; aPKC; F09E5.1 | cel-miR-265 | 291 | 317 | UAUGG--UGGGAA-----GGAGGGagu | ||||| |: ||| |||||| | ATACCTAATGCTTGATGACCTCCCctt |
pkc-3; aPKC; F09E5.1 | cel-miR-358 | 278 | 298 | cugGAACUGUCCCUAUGGUUa | |||| :||| ||||| | | ataCTTGCTAGGAATACCTAa |
pkc-3; aPKC; F09E5.1 | cel-miR-46 | 98 | 119 | acuucucucGCUGAGGUACUGU | |||: |:|||||| | tgtcttataCGATACTATGACA |
pkc-3; aPKC; F09E5.1 | cel-miR-49 | 419 | 439 | AGAC-GUCGAAGAGCACCACGaa | |||| || |||||: | |||| | TCTGACA-CTTCTT-TTGTGCca |
pkc-3; aPKC; F09E5.1 | cel-miR-63 | 119 | 136 | aaaGGUUGAGCGAAGUCACAGUAU | |:||||| ||| |||| | acaCTAACTC------GTGGCATA |
pkc-3; aPKC; F09E5.1 | cel-miR-67 | 219 | 243 | AG-AUGAGAAAGAUCCUCCAACACU | || ||| | | | ||||||||| | TCTTACAATCCCGAAAAGGTTGTGA |
pkc-3; aPKC; F09E5.1 | cel-miR-74 | 387 | 418 | aCAUCUGACG---GU------AAAGAA-CGGU | | ||||| | || | |||| |||| | cGAAGACTACGATCAATGTAGTCTCTTCGCCA |
pkc-3; aPKC; F09E5.1 | cel-miR-784 | 419 | 439 | AGA-UGCAUGCGUCUAACACGGU | ||| || || : |||||||| | TCTGAC--ACTTCTTTTGTGCCA |
pkc-3; aPKC; F09E5.1 | cel-miR-790 | 420 | 441 | gcgccacAAGCGCUCACGGUuc | ||| : |||||| | ctgacacTTCTTTTGTGCCAcg |
pkc-3; aPKC; F09E5.1 | cel-miR-791 | 414 | 441 | aCGGAAUAGAC-------GCCUCACGGUuu | ||| ||||| : |||||| | cGCC--ATCTGACACTTCTTTTGTGCCAcg |
pkc-3; aPKC; F09E5.1 | cel-miR-793 | 276 | 298 | AGACAGAUUGAUUC-UAUGGAgu | || || :|||:| |||||| | TCATACTTGCTAGGAATACCTaa |
pkc-3; aPKC; F09E5.1 | cel-miR-84 | 105 | 129 | AUGUU---AUAAUGUAUGAUGGAGu | |||:| ||| ||| |||| ||| | TACGATACTATGACACACTAACTCg |
pkc-3; aPKC; F09E5.1 | cel-miR-67 | 236 | 243 | AGAUGAGAAAGAU--CC------------------UCCAACACU | ||||||| ||| || ||||||||| | UCUACUCG-UCUUGUGGUAUCUUACAAUCCCGAAAAGGUUGUGAU |
pkc-3; aPKC; F09E5.1 | cel-miR-784 | 432 | 439 | AGAUGCAUGCGUCU-----------------------AACACGGU | |:|:|| |||||||| | GAUCA--AUGUAGUCUCUUCGCCAUCUGACACUUCUUUUGUGCCAC |