DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004229 | cel-miR-794 | 172773 | skr-2 | ucacugUUGCUA-CUAAUGGAGu | ||| | |||||||: | cuguuaAACUUUCAAUUACCUUg | 2 | 17 | 17 | 39 | [ce6:I:9470462-9470484:+] | 0.6602 | 131 | 0 | -8.47 | -0.2976 |
MIMAT0006586 | cel-miR-1819 | 172773 | skr-2 | aggUAGUUCGAGUUAGUAAGgu | :|: |:|: |||||| | acaGUUCUGUUU-UUCAUUCaa | 3 | 20 | 140 | 160 | [ce6:I:9470585-9470605:+] | 0.5068 | 121 | 0 | -10.88 | -0.2259 |
MIMAT0006591 | cel-miR-1824 | 172773 | skr-2 | uucaacccccucuuuGUGACGGu | ||||||| | guuaacaaauuucuuCACUGCCa | 2 | 9 | 101 | 123 | [ce6:I:9470546-9470568:+] | 0.5136 | 140 | 7 | -14.66 | -1.1965 |
MIMAT0015267 | cel-miR-1829a* | 172773 | skr-2 | auguuuguuaaucuucAGGGGAa | |||||| | ----aucuccaucuuuUCCCCUg | 2 | 8 | 1 | 19 | [ce6:I:9470446-9470464:+] | 0.6602 | 120 | 6 | -9.51 | -0.2723 |
MIMAT0015267 | cel-miR-1829a* | 172773 | skr-2 | auguuuguuaaucuucAGGGGAa | |||||| | ucauccaccauaucuuUCCCCUu | 2 | 8 | 58 | 80 | [ce6:I:9470503-9470525:+] | 0.5136 | 120 | 6 | -11.45 | -0.1704 |
MIMAT0011458 | cel-miR-2218b* | 172773 | skr-2 | agAGUGAUGUUUGA-UGUUUAAa | |: :|| ::| ||||||| | acUUUUUAAUUGUUAACAAAUUu | 2 | 21 | 90 | 112 | [ce6:I:9470535-9470557:+] | 0.5136 | 143 | 7 | -8.99 | -1.0470 |
MIMAT0011460 | cel-miR-2219 | 172773 | skr-2 | gaAGUCGAA-AGGGAGCGUGAAGc | || ||| |: |||||||: | uuUCCCCUUAUUAAACGCACUUUu | 2 | 22 | 72 | 95 | [ce6:I:9470517-9470540:+] | 0.5136 | 136 | 0 | -15.43 | -0.1153 |
MIMAT0000005 | cel-miR-34 | 172773 | skr-2 | guUGGUCGAUUGGUGUGACGGa | | || | |: ||||||| | uuAACAAAUUUCUUCACUGCCa | 2 | 21 | 102 | 123 | [ce6:I:9470547-9470568:+] | 0.5136 | 148 | 7 | -15.25 | -1.1948 |
MIMAT0000058 | cel-miR-85 | 172773 | skr-2 | cgugcUGAAAAGUUUAUGAAACAu | || |||||| ||| |||| | guuaaAC-UUUCAAUUACCUUGUu | 2 | 20 | 19 | 41 | [ce6:I:9470464-9470486:+] | 0.6602 | 141 | 0 | -10.69 | -0.1012 |