DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015096 cel-miR-46* 182077 C01G6.4 gacAGUUA-UCUGCCGAGAGAa ||| | | : ||||||| uguUCACUCAUCUCGCUCUCUg 2 19 292 313 [ce6:II:9271335-9271356:-] 0.5312 145 7 -11.34 -0.5869 MIMAT0015097 cel-miR-47* 182077 C01G6.4 ugAC-AGUUAUCUGA-CGAGAGAa || ||| | || ||||||| ucUGUUCACUCAUCUCGCUCUCUg 2 21 290 313 [ce6:II:9271335-9271358:-] 0.5312 150 7 -17.87 -0.5869 MIMAT0015112 cel-miR-229* 182077 C01G6.4 gaUACUGUGGGCUAUGG-AAAGa |||| ||: ||||| |||| auAUGA-ACU--AUACCAUUUCu 2 21 118 137 [ce6:II:9271511-9271530:-] 0.5495 123 0 -15.71 -0.9461 MIMAT0015112 cel-miR-229* 182077 C01G6.4 gauacuGUGGGCUA--UG-GAAAGa |||:||:| || ||||| auucacCACUCGGUACACACUUUCu 2 17 332 356 [ce6:II:9271292-9271316:-] 0.5312 123 0 -21.23 -0.7507 MIMAT0000312 cel-miR-257 182077 C01G6.4 aguGACCCAUG-A-GGACUAUGAg ||| ||: | :|||||||| uuuCUGUCUAUGUAUCUGAUACUc 2 20 352 375 [ce6:II:9271273-9271296:-] 0.5312 153 7 -19.63 -0.7524 MIMAT0000322 cel-miR-266 182077 C01G6.4 cgaAACGGUUUCAGAACGGa || ||| ||||||| auaUUCCCAUUUUCUUGCCc 2 18 17 36 [ce6:II:9271612-9271631:-] 0.5495 153 7 -14.33 -0.9774 MIMAT0000324 cel-miR-268 182077 C01G6.4 uggUUUGACGAAGAU-UAAGAACGg ||| | :| | | ||||||| caaAAAAUAUUCCCAUUUUCUUGCc 2 22 11 35 [ce6:II:9271613-9271637:-] 0.5729 152 7 -14.33 -0.8530 MIMAT0015239 cel-miR-786* 182077 C01G6.4 cauuuAUGGGGUUGACUAUAAGc | |: ||| |||||| augccUUCUGCAAAAAAUAUUCc 2 19 1 23 [ce6:II:9271625-9271647:-] 0.5729 122 6 -9.63 -0.1454 MIMAT0015240 cel-miR-788* 182077 C01G6.4 gcuaaGAUUAGGUAAAGg ||| ||||||| augaaCUAUACCAUUUCu 2 14 120 137 [ce6:II:9271511-9271528:-] 0.5495 149 7 -12.60 -1.0852 MIMAT0015240 cel-miR-788* 182077 C01G6.4 gcUA-AGAUUAGGUAAAGg || |:| | ||||||: ucAUCUUUCA-CCAUUUUc 2 17 142 159 [ce6:II:9271489-9271506:-] 0.5623 129 0 -11.26 -0.1453 MIMAT0015240 cel-miR-788* 182077 C01G6.4 gcuaagAUUA-GGUAAAGg || | ||||||: aaaaaaUAUUCCCAUUUUc 2 13 12 30 [ce6:II:9271618-9271636:-] 0.5729 127 0 -9.50 -0.1866 MIMAT0004235 cel-miR-800 182077 C01G6.4 gcCGUCUGUUAAAGGCUCAAAc |:||| |:|||:||||||| caGUAGA-AGUUUUCGAGUUUg 2 21 36 56 [ce6:II:9271592-9271612:-] 0.5495 174 7 -25.73 -0.7764 MIMAT0005523 cel-miR-1022 182077 C01G6.4 cuaccGCAGGAUUGUUAC-UAGAa | |:||: | ||| |||| acacaCUUUCUGUCUAUGUAUCUg 2 19 346 369 [ce6:II:9271279-9271302:-] 0.5312 122 0 -9.33 -0.9731 MIMAT0006586 cel-miR-1819 182077 C01G6.4 agGUAGUUCGAGUUAG-UAAGGu |||| :|:|:|| ||||| uuCAUC-UUUUUAGUCAAUUCCa 2 21 244 265 [ce6:II:9271383-9271404:-] 0.5312 122 0 -19.79 -1.0572 MIMAT0011425 cel-miR-2207 182077 C01G6.4 gaAUAUGUGUCAG-AGUUAAGUGu |:|| : || |:||||||| ucUGUAGCUUUUCUUUAAUUCACc 2 22 315 338 [ce6:II:9271310-9271333:-] 0.5312 152 7 -10.30 -0.8884 MIMAT0011425 cel-miR-2207 182077 C01G6.4 gaauauguGUCAGA-GUUAAGUgu :| ||| |||||| cuuccggcUACUCUGAAAUUCAaa 3 16 399 422 [ce6:II:9271226-9271249:-] 0.5000 126 0 -7.80 -0.1242 MIMAT0011430 cel-miR-2208b-3p 182077 C01G6.4 acuucacaugguuuuAGACGUa |||||| ---------augccuUCUGCAa 2 8 1 13 [ce6:II:9271635-9271647:-] 0.5964 120 6 -11.37 -0.3469 MIMAT0011434 cel-miR-2209c 182077 C01G6.4 acAUCACAU-UGGC--CACCAGAAAa | ||| | ||:| || |||||| ugUUGUGCAUACUGUAGUCGUCUUUa 2 22 200 225 [ce6:II:9271423-9271448:-] 0.5312 131 6 -14.45 -0.1416 MIMAT0011444 cel-miR-2214 182077 C01G6.4 uugcGGCCAGUUCAACAA-CAGUUAc |:| ||| || || |||||| ucucCUGUUCAUCUUUUUAGUCAAUu 2 22 237 262 [ce6:II:9271386-9271411:-] 0.5312 133 6 -9.93 -0.8179 MIMAT0011454 cel-miR-2209b 182077 C01G6.4 acuucguguuGGCGAGUAGAGa :| |||||||| uuucuucuguUCACUCAUCUCg 2 13 285 306 [ce6:II:9271342-9271363:-] 0.5312 148 7 -13.77 -0.5027 MIMAT0011454 cel-miR-2209b 182077 C01G6.4 acuucguguuGGCG-AGUAGAGa || | ||||||| gucuuuaauuCCUCAUCAUCUCc 2 13 219 241 [ce6:II:9271407-9271429:-] 0.5312 143 7 -13.21 -0.8725 MIMAT0011457 cel-miR-2218b 182077 C01G6.4 cuuuUACUACAUCAA--ACAUCAGa ||| |||: | ||||||| ccccAUGUUGUGCAUACUGUAGUCg 2 20 195 219 [ce6:II:9271429-9271453:-] 0.5312 154 7 -13.14 -0.5308 MIMAT0014446 cel-miR-2953-5p 182077 C01G6.4 uaaaagugcuuguGAAGACAu ||||||| guuauuuuucuuuCUUCUGUu 2 9 275 295 [ce6:II:9271353-9271373:-] 0.5312 140 7 -10.57 -1.0463 MIMAT0014446 cel-miR-2953-5p 182077 C01G6.4 uaaaagugcuuguGAAGACau |||||| ---------augcCUUCUGca 3 9 1 12 [ce6:II:9271636-9271647:-] 0.5964 120 0 -7.84 -0.3028 MIMAT0000044 cel-miR-72 182077 C01G6.4 agucgAU-ACGGUUGUAGAACGGa || | ||| : ||||||| aaaaaUAUUCCCAUUUUCUUGCCc 2 19 13 36 [ce6:II:9271612-9271635:-] 0.5729 153 7 -15.01 -1.0196 MIMAT0000045 cel-miR-73 182077 C01G6.4 ugacuUGACGGAUGUAGAACGGu |:| || : ||||||| aaaauAUUCCCAUUUUCUUGCCc 2 19 14 36 [ce6:II:9271612-9271634:-] 0.5495 150 7 -12.63 -0.9835 MIMAT0000046 cel-miR-74 182077 C01G6.4 acaUCUGACGGU-AAAGAACGGu | |:| ||| ||||||||| aaaAUAUUCCCAUUUUCUUGCCc 2 20 14 36 [ce6:II:9271612-9271634:-] 0.5495 166 7 -16.72 -0.9835 MIMAT0000059 cel-miR-86 182077 C01G6.4 cuGACACCGUUUCGUAAGUGAau || | || | |||||| aaCUAUACCAUUUC-UUCACUca 3 22 123 144 [ce6:II:9271504-9271525:-] 0.5495 123 0 -6.86 -0.1348 MIMAT0000284 cel-miR-229 182077 C01G6.4 gcuACCU-UUUCUAUUGGUCACA-GUAa || | | ||| ||: |||| ||| gucUGUAUAUAGA-AAUGCGUGUACAUa 2 24 94 120 [ce6:II:9271528-9271554:-] 0.5495 120 0 -8.76 -0.5561 MIMAT0000304 cel-miR-248 182077 C01G6.4 acucGCA-AUAGGCACGUGCACAUa :|| ||| ::|||||| cgucUGUAUAUAGAAAUGCGUGUAc 2 21 93 117 [ce6:II:9271531-9271555:-] 0.5495 127 6 -15.00 -0.1475 MIMAT0000304 cel-miR-248 182077 C01G6.4 acucgcaauAGGCACG--UGCACAua ||| | | |||||| uuagucaauUCCAUCCCAACGUGUua 3 16 253 278 [ce6:II:9271370-9271395:-] 0.5312 126 0 -12.79 -0.1371 MIMAT0004220 cel-miR-785 182077 C01G6.4 agAUGUGUUUUGUUAAGUGAau ||:|| | : |||||| acUAUAC-CAUUUCUUCACUca 3 21 124 144 [ce6:II:9271504-9271524:-] 0.5495 126 0 -12.05 -0.1440

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score C01G6.4 RAID00194132 cel-miR-229-5p miRNA MIMAT0000284 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID00865838 cel-miR-72-5p miRNA MIMAT0000044 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID00872982 cel-miR-86-5p miRNA MIMAT0000059 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID01739088 cel-miR-73-3p miRNA MIMAT0000045 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID01866957 cel-mir-2953 miRNA MI0013633 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID01972567 cel-miR-74-3p miRNA MIMAT0000046 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID02045621 cel-miR-785-3p miRNA MIMAT0004220 C01G6.4 mRNA 182077 Prediction 0.1828 C01G6.4 RAID02955641 cel-miR-248 miRNA MIMAT0000304 C01G6.4 mRNA 182077 Prediction 0.1828