DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015099 cel-miR-51* 176401 cyld-1 acGUGGACAUGGACGAAG-GUAc ::|:| ||| ||||| ||| uuUGCUUCUACGGGCUUCACAUu 2 21 120 142 [ce6:III:9898753-9898775:-] 0.5444 128 0 -14.39 -0.5449 MIMAT0000329 cel-miR-273 176401 cyld-1 gucggcugugucAUGCCCGu ||||||| caccuuugcuucUACGGGCu 2 9 116 135 [ce6:III:9898760-9898779:-] 0.5444 140 7 -15.49 -0.6442 MIMAT0015240 cel-miR-788* 176401 cyld-1 gcuAAG-AUUAGGUAAAGg ||| | |:|||||| uuuUUCAUUUUUCAUUUCa 2 16 347 365 [ce6:III:9898530-9898548:-] 0.5444 134 6 -8.71 -0.3356 MIMAT0015241 cel-miR-797* 176401 cyld-1 uaAAGUGUCUUUGG----UUACUUUu ||:| |||| |: ||| ||| uuUUUAAAGAAUCUGAAAAAUUAAAa 2 21 154 179 [ce6:III:9898716-9898741:-] 0.5444 123 0 -7.33 -0.1244 MIMAT0005032 cel-miR-1019 176401 cyld-1 gaccUUUCGUUACAC--CUUAAUGUc |||| ||| || ||||| | uuuuAAAG-AAUCUGAAAAAUUAAAa 2 21 155 179 [ce6:III:9898716-9898740:-] 0.5444 125 0 -3.15 -0.1694 MIMAT0006586 cel-miR-1819 176401 cyld-1 agguaguucgaguuAGUAAGGu |||||:| cgauuuuucauuuuUCAUUUCa 2 9 344 365 [ce6:III:9898530-9898551:-] 0.5444 124 0 -10.90 -0.1197 MIMAT0006587 cel-miR-1820 176401 cyld-1 cuUGUAGUAGCUUUUUGUUAGUUUu | | ||| :||| |||:||| uuAAAGAAUCUGAAA--AAUUAAAa 2 24 157 179 [ce6:III:9898716-9898738:-] 0.5444 140 0 -7.43 -0.1152 MIMAT0006775 cel-miR-1833 176401 cyld-1 cguguGAAUAAAG-CGUUC-GGAGc || ||||| |||| |||| cccuuCUAAUUUCUUCAAGUCCUCc 2 19 89 113 [ce6:III:9898782-9898806:-] 0.5444 129 0 -14.03 -0.9560 MIMAT0011430 cel-miR-2208b-3p 176401 cyld-1 acUUCACAUGGUUUUAGACGUa || | | |:|||||| | agAAUUUUUAAAGAAUCUGAAa 2 21 150 171 [ce6:III:9898724-9898745:-] 0.5444 124 0 -9.89 -0.1959 MIMAT0011451 cel-miR-2217* 176401 cyld-1 cuAGCUGUGGCUGAC--GGGUGAGAc |:| :::| :|| |||||||| aaUUG-UGUCUUUUGCCCCCACUCUg 2 23 257 281 [ce6:III:9898614-9898638:-] 0.5444 147 7 -24.23 -0.5077 MIMAT0011458 cel-miR-2218b* 176401 cyld-1 agagUGA-UGUUUGAUGUUUAAa |:| | ||| ||||||| aaaaAUUAAAAAAAAACAAAUUg 2 19 169 191 [ce6:III:9898704-9898726:-] 0.5444 153 7 -6.10 -1.1909 MIMAT0014446 cel-miR-2953-5p 176401 cyld-1 uaaaagugcuugugAAGACAu |||||| caaaaugaguagaaUUCUGUa 2 8 50 70 [ce6:III:9898825-9898845:-] 0.5444 120 6 -14.25 -0.2782 MIMAT0000031 cel-miR-59 176401 cyld-1 guaguaggacuauuuGCUAAGCu ||||||| uaguuguuucccucuCGAUUCGa 2 9 324 346 [ce6:III:9898549-9898571:-] 0.5444 140 7 -15.46 -1.1885 MIMAT0000042 cel-miR-70 176401 cyld-1 uaccuuUGUGGU-UGCUGCAUAAu ::|:|| | ||||||| uuuuuuGUAUCAUAAUACGUAUUa 2 18 11 34 [ce6:III:9898861-9898884:-] 0.5444 148 7 -13.03 -1.2076 MIMAT0000291 cel-miR-236 176401 cyld-1 ucGCAGUAAUGG--ACUGU-CAUAAu ||| ||||:| | || ||||| uaCGU-AUUAUCUUUUUCAUGUAUUc 2 22 26 50 [ce6:III:9898845-9898869:-] 0.5444 122 0 -14.23 -1.1210 MIMAT0000302 cel-miR-246 176401 cyld-1 cgaggaugggcuuuGUACAUu |||||| cguauuaucuuuuuCAUGUAu 2 8 28 48 [ce6:III:9898847-9898867:-] 0.5444 120 6 -11.01 -0.1385 MIMAT0000697 cel-miR-355 176401 cyld-1 guaucgaguccgaUUUUGUUu ||||||| gaaaaauuaaaaaAAAACAAa 2 9 168 188 [ce6:III:9898707-9898727:-] 0.5444 140 7 -6.60 -1.3243 MIMAT0004227 cel-miR-792 176401 cyld-1 agacuuucaacuucucUAAAGUu |||||| cgauuuuucauuuuucAUUUCAu 2 8 344 366 [ce6:III:9898529-9898551:-] 0.5444 120 6 -2.74 -0.1379

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score cyld-1 RAID01176633 cel-miR-355-5p miRNA MIMAT0000697 cyld-1 mRNA 176401 CLIP-seq//Prediction 0.6308 cyld-1 RAID01327903 cel-miR-792-3p miRNA MIMAT0004227 cyld-1 mRNA 176401 Prediction 0.1828 cyld-1 RAID01966424 cel-miR-59-3p miRNA MIMAT0000031 cyld-1 mRNA 176401 Prediction 0.1828 cyld-1 RAID02064394 cel-miR-236-3p miRNA MIMAT0000291 cyld-1 mRNA 176401 CLIP-seq//Prediction 0.6308 cyld-1 RAID02549719 cel-miR-246-3p miRNA MIMAT0000302 cyld-1 mRNA 176401 CLIP-seq//Prediction 0.6308 cyld-1 RAID03465150 cel-miR-70-3p miRNA MIMAT0000042 cyld-1 mRNA 176401 Prediction 0.1828