DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015093 cel-miR-34* 190457 gcl-1 ccCACCGUCAC-UUCCAUCGGCa || || | || ||||||| auGUAACACAGAAAAGUAGCCGa 2 21 396 418 [ce6:IV:13408563-13408585:-] 0.5000 151 7 -16.98 -1.1195 MIMAT0015103 cel-miR-61* 190457 gcl-1 ccugauucggggCAUUGGgu |||||| uaaaggcgauagGUAACCaa 3 9 285 304 [ce6:IV:13408677-13408696:-] 0.5000 120 0 -11.02 -0.1242 MIMAT0000313 cel-miR-258 190457 gcl-1 uuuuCCUAAGGAGAGUUUUGg | || | | ||||||| ggguGUAUACGU-UCAAAACc 2 18 537 556 [ce6:IV:13408425-13408444:-] 0.5000 147 7 -15.11 -0.3357 MIMAT0000698 cel-miR-356 190457 gcl-1 acuaaacaagcgcaACGAGUu |||||| auagacccaaaaugUGCUCAa 2 8 45 65 [ce6:IV:13408916-13408936:-] 0.5000 120 6 -10.31 -0.2260 MIMAT0015239 cel-miR-786* 190457 gcl-1 caUUUAUGGGGUU---GACUA-UAAGc ||||:| :|| |||| |||| aaAAAUGCAAUAAAGGAUGAUAAUUCc 2 22 348 374 [ce6:IV:13408607-13408633:-] 0.5000 120 0 -11.89 -0.9239 MIMAT0015240 cel-miR-788* 190457 gcl-1 gcUAAGAUUAGGUAAAGg | |:| :|||||||| gaAAUUU-GUCCAUUUCa 2 17 511 527 [ce6:IV:13408454-13408470:-] 0.5000 150 7 -11.97 -0.9439 MIMAT0015241 cel-miR-797* 190457 gcl-1 uaaAGUGUCUUUG---GUUACUUUu | | |||| : :||||||| aaaUGAAAGAAUUUCGUAAUGAAAc 2 20 64 88 [ce6:IV:13408893-13408917:-] 0.5000 146 7 -8.41 -0.7341 MIMAT0015241 cel-miR-797* 190457 gcl-1 uaaagugucuuuGGUUACUUUu | ||||||| ccaaaaugugcuCAAAUGAAAg 2 11 51 72 [ce6:IV:13408909-13408930:-] 0.5000 142 7 -6.73 -0.7423 MIMAT0005822 cel-miR-1019* 190457 gcl-1 uuuUACUUUGAGCUUGUUACGAGUg || |:|| | || :|||||| cuuAU-AGACCCAAAAUGUGCUCAa 2 23 42 65 [ce6:IV:13408916-13408939:-] 0.5000 144 6 -11.30 -0.2160 MIMAT0005032 cel-miR-1019 190457 gcl-1 gaccuuucguuacaccuUAAUGUc |||||| uaaaaaauuaaaaaaauAUUACAc 2 8 125 148 [ce6:IV:13408833-13408856:-] 0.5000 120 6 -2.72 -0.1322 MIMAT0006584 cel-miR-1817 190457 gcl-1 guacuaucucuuCUGUAACCGAu || ||||||| ccaaaaaucaucGAAAUUGGCUa 2 12 301 323 [ce6:IV:13408658-13408680:-] 0.5000 147 7 -11.18 -1.0579 MIMAT0011427 cel-miR-2208a 190457 gcl-1 ccuauagucuaagcccAUGUGAa |||||| aaaauuaaaaaaauauUACACUg 2 8 128 150 [ce6:IV:13408831-13408853:-] 0.5000 120 6 -4.91 -0.2163 MIMAT0011429 cel-miR-2208b-5p 190457 gcl-1 ccuauagucuaggcccAUGUGAa |||||| aaaauuaaaaaaauauUACACUg 2 8 128 150 [ce6:IV:13408831-13408853:-] 0.5000 120 6 -7.49 -0.2163 MIMAT0011431 cel-miR-2209a* 190457 gcl-1 cuuccUCUUCUCACCAAUGUGAg | || | | ||||||| aaauuAAAAAAAU-AUUACACUg 2 19 129 150 [ce6:IV:13408831-13408852:-] 0.5000 144 7 -6.57 -1.1655 MIMAT0011433 cel-miR-2209c* 190457 gcl-1 uuuguucugcacgccAAUGUGAg ||||||| aaaauuaaaaaaauaUUACACUg 2 9 128 150 [ce6:IV:13408831-13408853:-] 0.5000 140 7 -6.54 -1.1692 MIMAT0011447 cel-miR-2216 190457 gcl-1 cgGAUGGCUGAAUUUUACACg :||: ||| |||||||| acUUAUAGACCCAAAAUGUGc 2 20 41 61 [ce6:IV:13408920-13408940:-] 0.5000 163 7 -19.86 -0.7154 MIMAT0011453 cel-miR-2209b* 190457 gcl-1 cuuccucuucucaacAAUGUGa |||||| aaaauuaaaaaaauaUUACACu 2 8 128 149 [ce6:IV:13408832-13408853:-] 0.5000 120 6 -7.03 -0.1259 MIMAT0000032 cel-miR-60 190457 gcl-1 acuugaucuuuuacacGUAUUAu |||||| auauauaucuaugcaaCAUAAUa 2 8 639 661 [ce6:IV:13408320-13408342:-] 0.4809 120 6 -6.35 -0.3016 MIMAT0000060 cel-miR-87 190457 gcl-1 cgUGUGGACUUUGAAACGAGUg | ||| ||| | |||||| auAGACC-CAAAAUGUGCUCAa 2 21 45 65 [ce6:IV:13408916-13408936:-] 0.5000 130 6 -14.79 -0.2160 MIMAT0000288 cel-miR-233 190457 gcl-1 ggcguguacgcguaACGAGUu |||||| auagacccaaaaugUGCUCAa 2 8 45 65 [ce6:IV:13408916-13408936:-] 0.5000 120 6 -13.66 -0.2199 MIMAT0000289 cel-miR-234 190457 gcl-1 uucccauaagagcuCGUUAUu |||||| uacuaccaaaaaauGCAAUAa 2 8 340 360 [ce6:IV:13408621-13408641:-] 0.5000 120 6 -5.66 -0.1381 MIMAT0000290 cel-miR-235 190457 gcl-1 aguccggccccucucACGUUAu |||||| uguacuaccaaaaaaUGCAAUa 2 8 338 359 [ce6:IV:13408622-13408643:-] 0.5000 120 6 -7.77 -0.1551 MIMAT0000293 cel-miR-238 190457 gcl-1 agacuuaccGUAGCCUCAUGUuu :||: |||||| aauuucguuUAUUAAAGUACAuu 3 15 262 284 [ce6:IV:13408697-13408719:-] 0.5000 126 0 -6.66 -0.1195 MIMAT0000294 cel-miR-239a 190457 gcl-1 ggucaUGGAUACACAUCAUGUuu :::||| | |||||| auuucGUUUAU-UAAAGUACAuu 3 19 263 284 [ce6:IV:13408697-13408718:-] 0.5000 128 0 -7.06 -0.1160 MIMAT0000295 cel-miR-239b 190457 gcl-1 gucaugAAAACACAUCAUGUuu ||| | |||||| auuucgUUUAUUAAAGUACAuu 3 17 263 284 [ce6:IV:13408697-13408718:-] 0.5000 128 0 -5.91 -0.1149 MIMAT0000298 cel-miR-242 190457 gcl-1 agCUUCGUUUCCGGAUGCGUu | | :| | :|||:||| auGUAAUAUAUAUCUAUGCAa 2 20 634 654 [ce6:IV:13408327-13408347:-] 0.4809 131 0 -11.84 -0.1261 MIMAT0000300 cel-miR-244 190457 gcl-1 guAUGG-UGAA---ACAUGUUGGUUUcu ||:| :||| ||||| |||||| acUAUCGGCUUAAAUGUACUACCAAAaa 3 23 324 351 [ce6:IV:13408630-13408657:-] 0.5000 148 0 -16.90 -0.1395 MIMAT0000302 cel-miR-246 190457 gcl-1 cgAGGAUG-GGCU--UUGUACAUu |: ||| :| | |||||||| acUUGUACAUCUAUGAACAUGUAa 2 20 616 639 [ce6:IV:13408342-13408365:-] 0.5022 149 7 -17.86 -1.1886 MIMAT0000700 cel-miR-358 190457 gcl-1 cuggaacugucccuAUGGUUa |||||| cggcuuaaauguacUACCAAa 2 8 329 349 [ce6:IV:13408632-13408652:-] 0.5000 120 6 -7.69 -0.1942 MIMAT0000768 cel-miR-392 190457 gcl-1 aguagugugcacuagCUACUAu |||||| aaaaaugcaauaaagGAUGAUa 2 8 348 369 [ce6:IV:13408612-13408633:-] 0.5000 120 6 -10.22 -0.1893 MIMAT0004227 cel-miR-792 190457 gcl-1 agACUUUCAACUUCUCUAAAGUu ||| :||| :: ||||||| acUGACGGUUCGGACGAUUUCAa 2 22 18 40 [ce6:IV:13408941-13408963:-] 0.5000 161 7 -18.64 -0.4293

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score gcl-1 RAID00088363 cel-miR-239b-5p miRNA MIMAT0000295 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID00323710 cel-miR-238-3p miRNA MIMAT0000293 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID00820091 cel-miR-792-3p miRNA MIMAT0004227 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID00848226 cel-miR-246-3p miRNA MIMAT0000302 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID00945175 cel-miR-239a-5p miRNA MIMAT0000294 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID01090550 cel-miR-242 miRNA MIMAT0000298 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID01375404 cel-miR-234-3p miRNA MIMAT0000289 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID01783332 cel-miR-87-3p miRNA MIMAT0000060 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID01988835 cel-miR-392-3p miRNA MIMAT0000768 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID02200700 cel-miR-233-3p miRNA MIMAT0000288 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID02568826 cel-miR-358-3p miRNA MIMAT0000700 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID02828693 cel-miR-235-3p miRNA MIMAT0000290 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID02951077 cel-miR-244-5p miRNA MIMAT0000300 gcl-1 mRNA 190457 Prediction 0.1828 gcl-1 RAID03464329 cel-miR-60-3p miRNA MIMAT0000032 gcl-1 mRNA 190457 Prediction 0.2202