DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0015091 cel-let-7* 171978 T20F5.6 cauuccAUCUUUUAACG--UAUCAAGu | | :|||| : ||||||: uacuauUUGUGAAUUCUAAAUAGUUUa 2 20 184 210 [ce6:I:3920362-3920388:-] 0.5000 134 0 -9.05 -0.1769 MIMAT0015091 cel-let-7* 171978 T20F5.6 caUUCCAUCUUUUAACGU-AUCAAGu || |||| | || |||||| uuAAAAAAGAAUCUCCCACUAGUUCc 2 24 297 322 [ce6:I:3920250-3920275:-] 0.5092 123 6 -8.77 -0.6412 MIMAT0015091 cel-let-7* 171978 T20F5.6 cauuccAUCUUUUAACG--UAUCAAGu | | :|||| : ||||||: uacuauUUGUGAAUUCUAAAUAGUUUa 2 20 184 210 [ce6:I:3920362-3920388:-] 0.5000 134 0 -9.05 -0.1811 MIMAT0015091 cel-let-7* 171978 T20F5.6 caUUCCAUCUUUUAACGU-AUCAAGu || |||| | || |||||| uuAAAAAAGAAUCUCCCACUAGUUCc 2 24 297 322 [ce6:I:3920250-3920275:-] 0.5092 123 6 -8.77 -0.7050 MIMAT0000027 cel-miR-56* 171978 T20F5.6 auguuggguuuuACCUAGGCGGu || ||||||: uuuguucucuucUGUAUCCGCUu 2 12 212 234 [ce6:I:3920338-3920360:-] 0.5000 131 0 -14.19 -0.1104 MIMAT0000027 cel-miR-56* 171978 T20F5.6 auguuggguuuuACCUAGGCGGu || ||||||: uuuguucucuucUGUAUCCGCUu 2 12 212 234 [ce6:I:3920338-3920360:-] 0.5000 131 0 -14.19 -0.1132 MIMAT0015102 cel-miR-60* 171978 T20F5.6 uaaAAUACCGUGAGAAGGUCAa |||| : :|:||| ||| uaaUUAU--UCUUUUUCAAGUc 2 20 12 31 [ce6:I:3920541-3920560:-] 0.5089 120 0 -8.14 -0.3053 MIMAT0015119 cel-miR-247* 171978 T20F5.6 ccaUUAAUCUUUGAAAAGAGAu ||| ||||: |||||:| cucAAUAAGAAG--UUUCUUUa 2 20 346 365 [ce6:I:3920207-3920226:-] 0.5748 144 0 -10.42 -0.1011 MIMAT0000313 cel-miR-258 171978 T20F5.6 uuuuccuaAGGAGAGUUUUGg |::| ||||||| uuucuuuaUUUUGUCAAAACg 2 14 358 378 [ce6:I:3920194-3920214:-] 0.5748 149 7 -9.24 -1.0498 MIMAT0006586 cel-miR-1819 171978 T20F5.6 aggUAGU-UCGAGU--UAGUAAGGu |||: | |||| ||||||| gugAUCGUAUCUCAUGUUCAUUCCg 2 20 137 161 [ce6:I:3920411-3920435:-] 0.5000 153 7 -20.58 -0.7777 MIMAT0006586 cel-miR-1819 171978 T20F5.6 aggUAGU-UCGAGU--UAGUAAGGu |||: | |||| ||||||| gugAUCGUAUCUCAUGUUCAUUCCg 2 20 137 161 [ce6:I:3920411-3920435:-] 0.5000 153 7 -20.58 -0.7858 MIMAT0006769 cel-miR-1829a 171978 T20F5.6 uuAUCUCU-UUAAGGUUAC-CAac |||| | ||||:||||| || uuUAGAAAUAAUUUCAAUGAGUgu 3 21 253 276 [ce6:I:3920296-3920319:-] 0.5000 123 0 -14.48 -0.1101 MIMAT0006769 cel-miR-1829a 171978 T20F5.6 uuAUCUCU-UUAAGGUUAC-CAac |||| | ||||:||||| || uuUAGAAAUAAUUUCAAUGAGUgu 3 21 253 276 [ce6:I:3920296-3920319:-] 0.5000 123 0 -14.48 -0.1137 MIMAT0011425 cel-miR-2207 171978 T20F5.6 gaAUAUGUG-UCAG-AGUUAAGUgu ||| |:| || |||||||| ugUAUCCGCUUAUCAUCAAUUCAau 3 22 224 248 [ce6:I:3920324-3920348:-] 0.5000 139 0 -13.51 -0.1069 MIMAT0011425 cel-miR-2207 171978 T20F5.6 gaAUAUGUG-UCAG-AGUUAAGUgu ||| |:| || |||||||| ugUAUCCGCUUAUCAUCAAUUCAau 3 22 224 248 [ce6:I:3920324-3920348:-] 0.5000 139 0 -13.51 -0.1096 MIMAT0011442 cel-miR-2213 171978 T20F5.6 aauccGUCAGGAGAAUGUCGAa || ||| ||||||| auguuCAUUCCGACUACAGCUu 2 18 150 171 [ce6:I:3920401-3920422:-] 0.5000 153 7 -16.22 -0.8548 MIMAT0011442 cel-miR-2213 171978 T20F5.6 aauccGUCAGGAGAAUGUCGAa || ||| ||||||| auguuCAUUCCGACUACAGCUu 2 18 150 171 [ce6:I:3920401-3920422:-] 0.5000 153 7 -16.22 -0.8625 MIMAT0011444 cel-miR-2214 171978 T20F5.6 uugcggccaguucaACAACAGUUac | ||||||| aagaaguuucuuuaUUUUGUCAAaa 3 12 352 376 [ce6:I:3920196-3920220:-] 0.5748 127 0 -6.48 -0.1578 MIMAT0011444 cel-miR-2214 171978 T20F5.6 uugcggccaguucaacaaCAGUUAc |||||| uuaauuauucuuuuucaaGUCAAUc 2 8 11 35 [ce6:I:3920537-3920561:-] 0.5089 120 6 -5.20 -0.1007 MIMAT0011444 cel-miR-2214 171978 T20F5.6 uugcggccaguucaacaaCAGUUAc |||||| uuaauuauucuuuuucaaGUCAAUc 2 8 11 35 [ce6:I:3920537-3920561:-] 0.5089 120 6 -5.20 -0.3755 MIMAT0011455 cel-miR-2218a 171978 T20F5.6 acuccgaauuuugaacAUCAAAc |||||| auuugugaauucuaaaUAGUUUa 2 8 188 210 [ce6:I:3920362-3920384:-] 0.5000 120 6 -3.64 -0.2065 MIMAT0011455 cel-miR-2218a 171978 T20F5.6 acuccgaauuuugaacAUCAAAc |||||| auuugugaauucuaaaUAGUUUa 2 8 188 210 [ce6:I:3920362-3920384:-] 0.5000 120 6 -3.64 -0.2113 MIMAT0011461 cel-miR-2220* 171978 T20F5.6 cuauuuaucaaauACCAGAAUg |||||||| -----------acUGGUCUUAu 2 10 1 11 [ce6:I:3920561-3920571:-] 0.4998 145 7 -10.95 -0.4735 MIMAT0011461 cel-miR-2220* 171978 T20F5.6 cuauuuaucaaauACCAGAAUg |||||||| -----------acUGGUCUUAu 2 10 1 11 [ce6:I:3920561-3920571:-] 0.4998 145 7 -10.95 -1.0262 MIMAT0014446 cel-miR-2953-5p 171978 T20F5.6 uaAAAGU--GCUUGUGAAGACAu ||| | :| | ||||||| agUUUAAUUUGUUCUCUUCUGUa 2 20 205 227 [ce6:I:3920345-3920367:-] 0.5000 146 7 -13.86 -1.2173 MIMAT0014446 cel-miR-2953-5p 171978 T20F5.6 uaaAAGUGC--UUGUGAAGACAu ||:|:| : ||||||| uuaUUUAUGUUUUUUCUUCUGUa 2 19 45 67 [ce6:I:3920505-3920527:-] 0.5180 141 7 -15.62 -1.2534 MIMAT0014446 cel-miR-2953-5p 171978 T20F5.6 uaAAAGU--GCUUGUGAAGACAu ||| | :| | ||||||| agUUUAAUUUGUUCUCUUCUGUa 2 20 205 227 [ce6:I:3920345-3920367:-] 0.5000 146 7 -13.86 -1.2209 MIMAT0014446 cel-miR-2953-5p 171978 T20F5.6 uaaAAGUGC--UUGUGAAGACAu ||:|:| : ||||||| uuaUUUAUGUUUUUUCUUCUGUa 2 19 45 67 [ce6:I:3920505-3920527:-] 0.5180 141 7 -15.62 -1.2559 MIMAT0000015 cel-miR-44 171978 T20F5.6 ucgACUUACACAGAGAUCAGu | | | | |:|| |||| uaaUUAUUCUUUUUCAAGUCa 2 19 12 32 [ce6:I:3920540-3920560:-] 0.5089 122 0 -7.99 -0.2123 MIMAT0000016 cel-miR-45 171978 T20F5.6 ucgACUUACACAGAGAUCAGu | | | | |:|| |||| uaaUUAUUCUUUUUCAAGUCa 2 19 12 32 [ce6:I:3920540-3920560:-] 0.5089 122 0 -7.99 -0.2123 MIMAT0000047 cel-miR-75 171978 T20F5.6 acuucggccaaccaUCGAAAuu |||||| uucauuccgacuacAGCUUUua 3 9 153 174 [ce6:I:3920398-3920419:-] 0.5000 120 0 -9.82 -0.1388 MIMAT0000047 cel-miR-75 171978 T20F5.6 acuucggccaaccaUCGAAAuu |||||| uucauuccgacuacAGCUUUua 3 9 153 174 [ce6:I:3920398-3920419:-] 0.5000 120 0 -9.82 -0.1419 MIMAT0000051 cel-miR-79 171978 T20F5.6 ucgaaaccauuggaUCGAAAua |||||| uucauuccgacuacAGCUUUua 3 9 153 174 [ce6:I:3920398-3920419:-] 0.5000 120 0 -6.11 -0.1415 MIMAT0000051 cel-miR-79 171978 T20F5.6 ucgaaaccauuggaUCGAAAua |||||| uucauuccgacuacAGCUUUua 3 9 153 174 [ce6:I:3920398-3920419:-] 0.5000 120 0 -6.11 -0.1447 MIMAT0000058 cel-miR-85 171978 T20F5.6 cgugcUGAAAAGUUUAUG--AAACAu |: |||| ||||| ||||| cuuuuAUAUUUCCAAUACUAUUUGUg 2 20 169 194 [ce6:I:3920378-3920403:-] 0.5000 123 0 -10.76 -1.0486 MIMAT0000058 cel-miR-85 171978 T20F5.6 cgugcUGAAAAGUUUAUG--AAACAu |: |||| ||||| ||||| cuuuuAUAUUUCCAAUACUAUUUGUg 2 20 169 194 [ce6:I:3920378-3920403:-] 0.5000 123 0 -10.76 -1.0549 MIMAT0000289 cel-miR-234 171978 T20F5.6 uucccAUAAGAGCUCGUUAUu | || |: || |||| uucaaUUUUAUUUAGAAAUAa 2 17 243 263 [ce6:I:3920309-3920329:-] 0.5000 120 0 -3.76 -0.1020 MIMAT0000701 cel-miR-359 171978 T20F5.6 aagcagucucuuucUGGUCACu ||||||| ucauuaucauuaucACCAGUGg 2 9 92 113 [ce6:I:3920459-3920480:-] 0.5000 140 7 -12.93 -0.3339 MIMAT0000701 cel-miR-359 171978 T20F5.6 aagcagucucuuucUGGUCACu ||||||| ucauuaucauuaucACCAGUGg 2 9 92 113 [ce6:I:3920459-3920480:-] 0.5000 140 7 -12.93 -0.3401 MIMAT0004227 cel-miR-792 171978 T20F5.6 agacuuucaacuucucUAAAGUu |||||| auuuuauuuagaaauaAUUUCAa 2 8 247 269 [ce6:I:3920303-3920325:-] 0.5000 120 6 -6.35 -0.1860 MIMAT0004227 cel-miR-792 171978 T20F5.6 agacuuucaacuucucUAAAGUu |||||| auuuuauuuagaaauaAUUUCAa 2 8 247 269 [ce6:I:3920303-3920325:-] 0.5000 120 6 -6.35 -0.1904 MIMAT0004232 cel-miR-797 171978 T20F5.6 agaaGAGUAACACUAACGA-CACUAu ||: || | ||| || ||||| uaccCUUUUUCU-AUU-CUCGUGAUc 2 22 119 142 [ce6:I:3920430-3920453:-] 0.5000 121 0 -7.83 -0.5802 MIMAT0004232 cel-miR-797 171978 T20F5.6 agaaGAGUAACACUAACGA-CACUAu ||: || | ||| || ||||| uaccCUUUUUCU-AUU-CUCGUGAUc 2 22 119 142 [ce6:I:3920430-3920453:-] 0.5000 121 0 -7.83 -0.5883

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score T20F5.6 RAID00791858 cel-miR-85-3p miRNA MIMAT0000058 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID01788046 cel-miR-792-3p miRNA MIMAT0004227 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID01849168 cel-miR-44-3p miRNA MIMAT0000015 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID01879564 cel-miR-75-3p miRNA MIMAT0000047 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID02128936 cel-miR-797-5p miRNA MIMAT0004232 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID02142874 cel-miR-45-3p miRNA MIMAT0000016 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID02524335 cel-miR-79-3p miRNA MIMAT0000051 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID03631859 cel-miR-359 miRNA MIMAT0000701 T20F5.6 mRNA 171978 Prediction 0.1828 T20F5.6 RAID04011286 cel-miR-234-3p miRNA MIMAT0000289 T20F5.6 mRNA 171978 Prediction 0.1828