DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0000316 cel-miR-261 177138 siah-1 gcacuuuugAUUUUUCGAu |:||||||| aaaaugugaUGAAAAGCUu 2 11 49 67 [ce6:IV:3747257-3747275:+] 0.4935 146 7 -13.53 -0.9153 MIMAT0015267 cel-miR-1829a* 177138 siah-1 augUUU--GUUAAUCUUCAGGGGAa ||| ||:||: || |||||| aaaAAAUUCAGUUGAAAAUCCCCUu 2 21 68 92 [ce6:IV:3747276-3747300:+] 0.4900 139 6 -17.91 -0.3131 MIMAT0011447 cel-miR-2216 177138 siah-1 cggauggcuGAA--UUUUACACg ||| |||||||| gauuuuuuuCUUCAAAAAUGUGa 2 13 35 57 [ce6:IV:3747243-3747265:+] 0.4935 147 7 -9.38 -1.1962 MIMAT0011459 cel-miR-2219* 177138 siah-1 cugcuacACGCUCUCUUUCGAca ||:|| : |||||| ucaaaaaUGUGAUGAAAAGCUua 3 17 46 68 [ce6:IV:3747254-3747276:+] 0.4935 136 0 -12.04 -0.1686 MIMAT0000004 cel-miR-2 177138 siah-1 cguguaguuucgaccgACACUAu |||||| uuuuuuucuucaaaaaUGUGAUg 2 8 37 59 [ce6:IV:3747245-3747267:+] 0.4935 120 6 -9.96 -0.1381 MIMAT0000014 cel-miR-43 177138 siah-1 cgcugucguucaUUUGACACUAu ||| |||||| uuuuuuucuucaAAAAUGUGAUg 2 12 37 59 [ce6:IV:3747245-3747267:+] 0.4935 123 6 -8.37 -0.1354 MIMAT0000049 cel-miR-77 177138 siah-1 accugucgauaccggACUACUu |||||| uuuucuucaaaaaugUGAUGAa 2 8 40 61 [ce6:IV:3747248-3747269:+] 0.4935 120 6 -7.93 -0.2208 MIMAT0000306 cel-miR-250 177138 siah-1 acgguugucaacugACACUAa |||||| uuuuucuucaaaaaUGUGAUg 2 8 39 59 [ce6:IV:3747247-3747267:+] 0.4935 120 6 -6.99 -0.1381 MIMAT0004216 cel-miR-255 177138 siah-1 gacAUUUUUUAGAGAAGUCAAa ||||||| ||||||| gcuUAAAAAA----UUCAGUUg 2 20 64 81 [ce6:IV:3747272-3747289:+] 0.4900 154 7 -9.93 -0.9872 MIMAT0004232 cel-miR-797 177138 siah-1 agaagaguaacacuaacgACACUAu |||||| gauuuuuuucuucaaaaaUGUGAUg 2 8 35 59 [ce6:IV:3747243-3747267:+] 0.4935 120 6 -11.61 -0.1367

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 siah-1; Y37E11AR.2 cel-miR-255 52 82 GACAU--UUUUUAGAG------AAGUCAAA |||: :|||| ||: ||||||| AUGUGAUGAAAAGCUUAAAAAAUUCAGUUG siah-1; Y37E11AR.2 cel-miR-261 52 68 -GCACUUUUGAUUUUUCGAU :|||| |:||||||| AUGUGA----UGAAAAGCUU siah-1; Y37E11AR.2 cel-miR-255 74 81 G---------------AC-AUUUUUUAGAG------AAGUCAAA || |:||||: ||: ||||||| UUUUUCUUCAAAAAUGUGAUGAAAAG-CUUAAAAAAUUCAGUUG siah-1; Y37E11AR.2 cel-miR-261 60 67 ----------------------------GCACUUUUGAUUUUUCGAU :|||| |:||||||| AAUUAUUUUUGAUUUUUUUCUUCAAAAAUGUGA----UGAAAAGCUU

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score siah-1 RAID00184634 cel-miR-43-3p miRNA MIMAT0000014 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6308 siah-1 RAID00949463 cel-miR-255-3p miRNA MIMAT0004216 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6478 siah-1 RAID00988947 cel-miR-47-3p miRNA MIMAT0000018 siah-1 mRNA 177138 Prediction 0.1828 siah-1 RAID02065729 cel-miR-250-3p miRNA MIMAT0000306 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6308 siah-1 RAID02569667 cel-miR-77-3p miRNA MIMAT0000049 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6308 siah-1 RAID02934427 cel-miR-787-3p miRNA MIMAT0004222 siah-1 mRNA 177138 Prediction 0.1828 siah-1 RAID02960821 cel-miR-90-3p miRNA MIMAT0000061 siah-1 mRNA 177138 Prediction 0.1828 siah-1 RAID03318550 cel-miR-797-5p miRNA MIMAT0004232 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6308 siah-1 RAID03826067 cel-miR-2-3p miRNA MIMAT0000004 siah-1 mRNA 177138 CLIP-seq//Prediction 0.6308