iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	31.9	116	165

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkw.pglknssskefrCPlCr 46
           C iC+++f   k+ p+v pCgH+++++C++k+ + +  +  ++ +CP Cr
   Q: 116  CGICYDPFntgKRIPKVFPCGHTICLQCIKKLlNTRTFLGGNTVICPSCR 165
           9*******555444***************999899999999999*****8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MDPFDIDGLN VRLRDLQRQL QDDMEEFRDM AQMDDFAHPF GGIDAAINVD DPVDDANNDE 60
PAAGAENVLD REDNQPQPEA VATPDVPKAE NEKEKEDEAD DTILTSKGTE MKGLSCGICY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTATTTCC TTCAAAAATA CACCGTTTTA ATTTCTCAAA TGGATCCGTT CGACATTGAT 60
GGTTTGAATG TTCGACTCCG TGACCTGCAA AGACAATTGC AAGACGACAG TAAGTTACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cel:CELE_T20F5.6

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005618	Arabidopsis lyrata	48.48	2.00e-06	44.30
IUUC-Ath-007373	Arabidopsis thaliana	48.48	2.00e-06	44.30
IUUC-Bol-016548	Brassica oleracea	37.68	1.00e-07	48.50
IUUC-Bra-017276	Brassica rapa	38.33	7.00e-08	49.30
IUUC-Gma-044330	Glycine max	40.43	2.00e-07	47.80
IUUC-Mmr-061708	Microcebus murinus	39.24	2.00e-10	58.90
IUUC-Mdo-062407	Monodelphis domestica	34.02	4.00e-12	64.30
IUUC-Olo-080692	Oryza longistaminata	41.18	1.00e-06	45.80
IUUC-Pno-095040	Phaeosphaeria nodorum	37.10	6.00e-06	44.70
IUUC-Ppa-095766	Physcomitrella patens	32.14	2.00e-10	58.20
IUUC-Ppe-101923	Prunus persica	32.43	5.00e-08	50.10
IUUC-Pgr-103533	Puccinia graminis	23.81	2.00e-06	43.90
IUUC-Stu-112110	Solanum tuberosum	27.54	1.00e-07	48.90
IUUC-Tca-121291	Theobroma cacao	33.82	2.00e-08	52.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence