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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Mmu-064084
Ensembl Protein ID ENSMUSP00000021287.5
UniProt Accession Q5F201; Q5F200; Q9D432; Q9DA68; CFA52_MOUSE
Genbank Protein ID BAB24416.1; BAB30457.1; CAI51998.1; CAI51998.1; CAI51999.1; CAI51999.1; CAI52022.1; CAI52022.1; CAI52023.1; CAI52023.1
Protein Name Cilia- and flagella-associated protein 52; WD repeat-containing protein 16
Genbank Nucleotide ID AK006118; AK016839; AL732570; AL663076; AL732570; AL663076; AL663076; AL732570; AL663076; AL732570
Gene Name Cfap52; Wdr16
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000020904.11 ENSMUST00000021287.11 ENSMUSP00000021287.5
ENSMUSG00000020904.11 ENSMUST00000126766.1 ENSMUSP00000116496.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
microRNATRANSFACRepTarmiRNAMap
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.00e-33 113.5 460 491
UBD/Beta-Prp 2.30e-58 198.9 504 614
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           H++sv+c++   ++   v++s Dgt+ +WDl 
   Q: 460  HKSSVSCIRVkkNNEECVTASTDGTCIIWDLV 491
           9**********87799**************85 PP
   

   UBD/Beta-Prp
   S: 139  vvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks 227
           + +cv++hp+++ ++++++Dr++  W +  g+++r+l+g   +s++ ++++++g ++v+g++d  vk+wd+ +ge+ +   gh+ n+  
   Q: 504  LFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIRELEGSLSGSINGMDITQEGGHFVTGGHDHLVKVWDYNEGEVTHVGVGHSGNIMA 592
           578************************************************************************************** PP
   S: 228  vrfspnderlvsgssDgsiriW 249
           +r sp ++++vs+s+Dg i  W
   Q: 593  MRISPGNQYIVSVSADGAILRW 614
           *******************999 PP
   
Organism Mus musculus
Functional Description
(View)

Functional Description


     May play a role in cell growth and/or survival.
 May play a role in cell growth and/or survival.
Protein Sequence
(Fasta)
MEEQVLPELD VAELELQAVI GFNGHVPNGL KCHPDQEHLI YPLGCTVLIQ AINTNEQNFL 60
HGHGNNVSCV TISKEGDYIA SGQVTFMGFK ADIILWDFKK RELIARLSLH KGKIEALAFS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Mmu-064084|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGACGACCAG GAGACGCTGC ACCCTGGAGT TGAAGAATCA ATGAGCTGAA ACTCTCCAGG 60
ATGGAAGAAC AAGTTTTACC CGAGCTGGAT GTAGCAGAAC TGGAGCTTCA GGCTGTGATC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Mmu-064084|E3,WD_repeat;UBD,Beta-Prp|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0966--Cell projection
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR033015--CFAP52
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0042995--C:cell projection
GO:0005737--C:cytoplasm
KEGG mmu:71860
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002048 Ailuropoda melanoleuca 92.10 0.00e+00 1176.00
IUUC-Apl-004011 Anas platyrhynchos 70.81 0.00e+00 905.00
IUUC-Aca-004805 Anolis carolinensis 73.66 0.00e+00 962.00
IUUC-Ame-010655 Astyanax mexicanus 61.77 0.00e+00 798.00
IUUC-Bta-013493 Bos taurus 91.51 0.00e+00 1140.00
IUUC-Cja-019923 Callithrix jacchus 91.29 0.00e+00 1170.00
IUUC-Cfa-020609 Canis familiaris 92.74 0.00e+00 1168.00
IUUC-Cpo-022158 Cavia porcellus 92.35 0.00e+00 1152.00
IUUC-Cre-022705 Chlamydomonas reinhardtii 45.23 5.00e-161 561.00
IUUC-Csa-023338 Chlorocebus sabaeus 91.61 0.00e+00 1177.00
IUUC-Cho-024884 Choloepus hoffmanni 85.54 0.00e+00 720.00
IUUC-Cin-025634 Ciona intestinalis 62.68 0.00e+00 808.00
IUUC-Csv-026211 Ciona savignyi 65.31 1.00e-95 342.00
IUUC-Dre-028268 Danio rerio 65.13 0.00e+00 874.00
IUUC-Dno-029202 Dasypus novemcinctus 86.69 0.00e+00 1049.00
IUUC-Dor-030197 Dipodomys ordii 80.73 0.00e+00 761.00
IUUC-Dme-032037 Drosophila melanogaster 35.80 2.00e-113 403.00
IUUC-Ete-033049 Echinops telfairi 81.71 0.00e+00 981.00
IUUC-Eca-033884 Equus caballus 92.26 0.00e+00 1156.00
IUUC-Eeu-034477 Erinaceus europaeus 80.93 2.00e-180 625.00
IUUC-Fca-035453 Felis catus 91.85 0.00e+00 1138.00
IUUC-Gmo-039448 Gadus morhua 65.47 2.00e-111 395.00
IUUC-Gga-040295 Gallus gallus 71.85 0.00e+00 942.00
IUUC-Gac-042074 Gasterosteus aculeatus 57.05 0.00e+00 707.00
IUUC-Ggo-044438 Gorilla gorilla 91.74 0.00e+00 910.00
IUUC-Hsa-046794 Homo sapiens 90.81 0.00e+00 1165.00
IUUC-Itr-048315 Ictidomys tridecemlineatus 94.81 0.00e+00 698.00
IUUC-Lch-050554 Latimeria chalumnae 66.55 0.00e+00 814.00
IUUC-Loc-052080 Lepisosteus oculatus 69.24 0.00e+00 903.00
IUUC-Laf-054288 Loxodonta africana 91.61 0.00e+00 1150.00
IUUC-Mcc-055746 Macaca mulatta 84.68 0.00e+00 1060.00
IUUC-Meu-056507 Macropus eugenii 74.93 7.00e-148 517.00
IUUC-Mga-059858 Meleagris gallopavo 71.24 0.00e+00 895.00
IUUC-Mmr-061757 Microcebus murinus 93.47 0.00e+00 1024.00
IUUC-Mdo-062670 Monodelphis domestica 82.07 0.00e+00 1087.00
IUUC-Mpu-066253 Mustela putorius furo 91.29 0.00e+00 1147.00
IUUC-Mlu-067944 Myotis lucifugus 76.86 0.00e+00 908.00
IUUC-Nle-069098 Nomascus leucogenys 91.29 0.00e+00 1169.00
IUUC-Opr-070525 Ochotona princeps 83.64 0.00e+00 915.00
IUUC-Ont-071609 Oreochromis niloticus 59.21 0.00e+00 766.00
IUUC-Oan-073543 Ornithorhynchus anatinus 78.84 0.00e+00 999.00
IUUC-Ocu-074209 Oryctolagus cuniculus 90.81 0.00e+00 1172.00
IUUC-Ola-086464 Oryzias latipes 57.05 0.00e+00 741.00
IUUC-Olu-087600 Ostreococcus lucimarinus 33.69 7.00e-95 341.00
IUUC-Oga-088977 Otolemur garnettii 91.13 0.00e+00 1170.00
IUUC-Oar-089192 Ovis aries 91.01 0.00e+00 1139.00
IUUC-Ptr-090882 Pan troglodytes 83.17 0.00e+00 1080.00
IUUC-Pan-092865 Papio anubis 87.14 0.00e+00 1108.00
IUUC-Psi-093270 Pelodiscus sinensis 75.98 0.00e+00 854.00
IUUC-Pma-094291 Petromyzon marinus 63.14 0.00e+00 852.00
IUUC-Ppa-095984 Physcomitrella patens 41.93 1.00e-145 510.00
IUUC-Pfo-097344 Poecilia formosa 51.07 0.00e+00 678.00
IUUC-Pab-098278 Pongo abelii 91.45 0.00e+00 1170.00
IUUC-Pca-101037 Procavia capensis 92.45 0.00e+00 1146.00
IUUC-Pva-102351 Pteropus vampyrus 92.29 0.00e+00 967.00
IUUC-Rno-105262 Rattus norvegicus 97.58 0.00e+00 1241.00
IUUC-Smo-109009 Selaginella moellendorffii 43.68 2.00e-161 562.00
IUUC-Sar-113156 Sorex araneus 78.86 9.00e-141 493.00
IUUC-Ssc-116319 Sus scrofa 91.87 2.00e-64 236.00
IUUC-Tru-117963 Takifugu rubripes 55.97 0.00e+00 722.00
IUUC-Tsy-119115 Tarsius syrichta 72.48 0.00e+00 822.00
IUUC-Tni-120388 Tetraodon nigroviridis 54.00 0.00e+00 687.00
IUUC-Tbe-127930 Tupaia belangeri 82.61 0.00e+00 633.00
IUUC-Ttr-128981 Tursiops truncatus 90.44 0.00e+00 1095.00
IUUC-Vpa-130492 Vicugna pacos 84.40 0.00e+00 1048.00
IUUC-Xtr-132142 Xenopus tropicalis 69.47 0.00e+00 920.00
Created Date 25-Jun-2017

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