iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-17	63.1	13	50

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf......sdtllvsGsdD...gtikvWDlrt 32
           ++v+ +++      ++ ++v+Gs+D   + +++W+l +
   Q: 13   EKVSQVRWlpeelqQSERFVTGSWDmdqNFVRLWRLQS 50
           57999****999864489*****9999999*****865 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSIANVSTHY ISEKVSQVRW LPEELQQSER FVTGSWDMDQ NFVRLWRLQS NQYVTATDSE 60
VDQIPRCMDK VRMEDDVTAM EFVDKDTLAV SCADGHLSVF NVHRAVEEDQ MQRTSRSGRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTCTTGCT CTGGTCACAC TTAACTCGAA AGCCGCATTA TTTTGTTTAC ATCGCGAATC 60
CTCTGCTAAA TCCAACGAAA AGATGTCCAT TGCAAACGTT TCCACGCACT ACATATCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0031080--C:nuclear pore outer ring
GO:0007067--P:mitotic nuclear division

KEGG

dme:Dmel_CG7671

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001593	Ailuropoda melanoleuca	25.53	3.00e-39	155.00
IUUC-Apl-003533	Anas platyrhynchos	26.61	9.00e-31	126.00
IUUC-Aca-004965	Anolis carolinensis	29.68	8.00e-46	176.00
IUUC-Aly-006431	Arabidopsis lyrata	22.87	3.00e-08	52.00
IUUC-Ath-007253	Arabidopsis thaliana	22.87	2.00e-08	52.80
IUUC-Ame-011694	Astyanax mexicanus	27.76	1.00e-33	136.00
IUUC-Bta-013161	Bos taurus	26.54	3.00e-43	168.00
IUUC-Cel-018567	Caenorhabditis elegans	25.84	7.00e-13	67.40
IUUC-Cja-020000	Callithrix jacchus	25.19	1.00e-29	122.00
IUUC-Cfa-021112	Canis familiaris	26.58	4.00e-43	167.00
IUUC-Cpo-022095	Cavia porcellus	27.56	4.00e-44	171.00
IUUC-Csa-023460	Chlorocebus sabaeus	26.06	1.00e-40	159.00
IUUC-Cho-024279	Choloepus hoffmanni	27.51	9.00e-33	133.00
IUUC-Cin-025360	Ciona intestinalis	29.58	2.00e-38	152.00
IUUC-Csv-026301	Ciona savignyi	28.23	7.00e-31	126.00
IUUC-Dre-028097	Danio rerio	29.41	3.00e-45	174.00
IUUC-Dno-029131	Dasypus novemcinctus	27.49	8.00e-44	170.00
IUUC-Dor-030496	Dipodomys ordii	24.28	1.00e-32	133.00
IUUC-Ete-032448	Echinops telfairi	28.19	3.00e-38	151.00
IUUC-Eca-034409	Equus caballus	26.54	2.00e-41	162.00
IUUC-Eeu-035343	Erinaceus europaeus	28.57	4.00e-25	108.00
IUUC-Fca-036177	Felis catus	27.35	2.00e-43	169.00
IUUC-Fal-037657	Ficedula albicollis	28.25	4.00e-35	141.00
IUUC-Gmo-038946	Gadus morhua	28.16	3.00e-44	171.00
IUUC-Gga-041070	Gallus gallus	27.03	3.00e-36	144.00
IUUC-Gac-042442	Gasterosteus aculeatus	29.02	1.00e-43	169.00
IUUC-Gma-043812	Glycine max	26.12	1.00e-09	56.20
IUUC-Ggo-045223	Gorilla gorilla	26.33	5.00e-42	164.00
IUUC-Hsa-045956	Homo sapiens	26.33	1.00e-42	166.00
IUUC-Itr-048116	Ictidomys tridecemlineatus	27.61	2.00e-43	169.00
IUUC-Lch-050035	Latimeria chalumnae	28.07	3.00e-45	174.00
IUUC-Laf-053404	Loxodonta africana	28.42	8.00e-47	180.00
IUUC-Mcc-055813	Macaca mulatta	26.33	6.00e-41	160.00
IUUC-Meu-056388	Macropus eugenii	30.00	1.00e-25	109.00
IUUC-Mga-060193	Meleagris gallopavo	27.42	7.00e-41	160.00
IUUC-Mmr-060818	Microcebus murinus	27.08	7.00e-43	167.00
IUUC-Mdo-062822	Monodelphis domestica	28.42	1.00e-43	169.00
IUUC-Mmu-064182	Mus musculus	27.61	8.00e-43	166.00
IUUC-Mac-065317	Musa acuminata	30.23	2.00e-07	49.70
IUUC-Mpu-066865	Mustela putorius furo	25.80	2.00e-34	138.00
IUUC-Mlu-067329	Myotis lucifugus	26.81	5.00e-37	147.00
IUUC-Nle-069093	Nomascus leucogenys	26.86	2.00e-43	169.00
IUUC-Opr-070481	Ochotona princeps	26.27	5.00e-37	147.00
IUUC-Ont-072445	Oreochromis niloticus	29.18	5.00e-44	170.00
IUUC-Oan-073029	Ornithorhynchus anatinus	27.81	1.00e-34	139.00
IUUC-Ocu-074275	Oryctolagus cuniculus	27.61	5.00e-44	170.00
IUUC-Ola-086862	Oryzias latipes	26.72	4.00e-42	164.00
IUUC-Oga-088952	Otolemur garnettii	26.32	9.00e-44	169.00
IUUC-Oar-089300	Ovis aries	26.81	1.00e-43	169.00
IUUC-Ptr-091389	Pan troglodytes	26.60	5.00e-43	167.00
IUUC-Pan-092174	Papio anubis	26.33	6.00e-41	160.00
IUUC-Psi-093326	Pelodiscus sinensis	27.68	2.00e-37	148.00
IUUC-Pfo-096331	Poecilia formosa	27.25	1.00e-38	152.00
IUUC-Pab-098306	Pongo abelii	26.60	1.00e-42	166.00
IUUC-Pca-100455	Procavia capensis	30.91	9.00e-10	57.40
IUUC-Ppe-101380	Prunus persica	28.57	4.00e-07	48.10
IUUC-Pva-102578	Pteropus vampyrus	26.60	7.00e-40	157.00
IUUC-Rno-105146	Rattus norvegicus	27.54	2.00e-41	162.00
IUUC-Sha-107640	Sarcophilus harrisii	28.15	2.00e-44	172.00
IUUC-Sly-111767	Solanum lycopersicum	27.27	3.00e-05	42.00
IUUC-Stu-112515	Solanum tuberosum	27.27	3.00e-05	42.00
IUUC-Sar-113681	Sorex araneus	28.72	3.00e-22	98.60
IUUC-Ssc-116129	Sus scrofa	26.81	4.00e-40	157.00
IUUC-Tgu-117456	Taeniopygia guttata	24.38	7.00e-15	72.80
IUUC-Tru-117630	Takifugu rubripes	30.20	6.00e-29	120.00
IUUC-Tsy-119331	Tarsius syrichta	26.44	1.00e-43	169.00
IUUC-Tni-120077	Tetraodon nigroviridis	28.19	8.00e-44	170.00
IUUC-Tca-121814	Theobroma cacao	27.56	2.00e-06	45.80
IUUC-Tbe-127359	Tupaia belangeri	24.47	5.00e-34	137.00
IUUC-Ttr-128461	Tursiops truncatus	27.08	8.00e-39	153.00
IUUC-Vpa-130162	Vicugna pacos	26.54	4.00e-40	157.00
IUUC-Vvi-131430	Vitis vinifera	25.76	2.00e-06	46.60
IUUC-Xtr-132446	Xenopus tropicalis	29.38	8.00e-45	173.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence