iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-041171

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AC161471

Gene Name

USP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000004228.4	ENSGALT00000006731.4	ENSGALP00000006720.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.50e-78	264.7	62	511

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenp....kepkgellkslqklfeelwkskkkavsprellkalkkeaeefsg 86
           G+kN+g tCY+NS+LQ+L+++pe+re+l++  +e+l   ++    + +   +  +lq+lf++l+  +++a s+++l++++++ ++e  +
   Q: 62   GIKNQGGTCYLNSLLQTLLFTPEFREALFSLGPEELGTLDDvgkpDAKVRIIPLQLQRLFAQLLLLDQQAASTTDLTESFGWNSNE--E 148
           9*****************************888888887664333444448999***************************99998..* PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           ++q+D+qE+ ++l+++le++l                            +++++li++l++g++ +qi+c+ec+n+s+r+e+fldl+++
   Q: 149  MRQHDVQELNRILFSALETSL--------------------------VGTSGHDLINRLYHGTVVNQIVCKECKNISERQEDFLDLTVA 211
           *********************..........................789*************************************** PP
   S: 176  vpgkeetkkeslqdcL.esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           v+g        l+++L +++++ee +e+en y c  c+k++ea+k+ kl+klP++L++ L Rf+f+ e++ r k +++++fp++++l+p
   Q: 212  VKGVA-----GLEEALwNMYVEEEYFENENLYRCGACDKLVEASKSAKLHKLPPFLTISLLRFNFDFEKCERYKETSCYTFPIQINLRP 295
           *****.....9****************************************************************************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslssGHYvayvkn................................................... 301
           fc+++e ++ +++ YeL++v++H+G++ +GHY++y+++                                                   
   Q: 296  FCEQTEMDD-SEYMYELFSVIIHKGGCYGGHYHVYIRDvdelgnwqlqededrliedqpsrdsentketenplavlkgilseeeckqip 383
           ****77766.5****************************************************************************** PP
   S: 302  ......................................................................................... 301
                                                                                                    
   Q: 384  vdqlgqkflekikvswnkkyrkqygalrkylqnhpqifqfspdenkvglkekyklpfksdfqgqafqsppqengiqwnsekaptrlres 472
           ******************************************************************99999999999988888887654 PP
   S: 302  .ekgk..WllfdDskVtevkeeevleetg..staYvlfYkr 337
               +  W+ ++DskV+++kee+++++ +  ++aY+lfY++
   Q: 473  sA--GchWFDLNDSKVQPIKEEDIEKQFQgkESAYMLFYRK 511
           33..157*******************9889*********98 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MGDWFSLDYF VFLKVCFVFT MFGDLFEEDF SFISNNHYGK GKKSKPKDSE PPAPRDFTNL 60
SGIKNQGGTC YLNSLLQTLL FTPEFREALF SLGPEELGTL DDVGKPDAKV RIIPLQLQRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGACT GGTTCAGTTG TAAGAATGGA TACATCACCA TAGAGGCTTT TGGATTAATG 60
TGATAACCAT AAAATTGCAA GTGGAGTTAA GGTAGATAGT GAATGATTAT TCAGTGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gga:100859211

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001216	Ailuropoda melanoleuca	62.99	0.00e+00	1451.00
IUUC-Apl-004105	Anas platyrhynchos	90.30	0.00e+00	2292.00
IUUC-Aca-004715	Anolis carolinensis	69.24	0.00e+00	1696.00
IUUC-Ame-011073	Astyanax mexicanus	49.53	0.00e+00	1103.00
IUUC-Bta-012487	Bos taurus	62.39	0.00e+00	1485.00
IUUC-Cja-018937	Callithrix jacchus	64.25	0.00e+00	1556.00
IUUC-Cfa-020645	Canis familiaris	55.73	0.00e+00	862.00
IUUC-Cpo-022160	Cavia porcellus	61.91	0.00e+00	1485.00
IUUC-Csa-023078	Chlorocebus sabaeus	64.91	0.00e+00	1587.00
IUUC-Cho-025013	Choloepus hoffmanni	49.69	1.00e-165	577.00
IUUC-Csv-026193	Ciona savignyi	57.02	4.00e-61	227.00
IUUC-Dre-027416	Danio rerio	50.23	0.00e+00	1184.00
IUUC-Dno-029639	Dasypus novemcinctus	59.07	0.00e+00	1186.00
IUUC-Dor-030624	Dipodomys ordii	77.12	2.00e-129	457.00
IUUC-Ete-032626	Echinops telfairi	52.28	2.00e-173	603.00
IUUC-Eca-034208	Equus caballus	64.21	0.00e+00	1551.00
IUUC-Eeu-035340	Erinaceus europaeus	37.08	2.00e-57	218.00
IUUC-Fca-036006	Felis catus	76.57	3.00e-172	597.00
IUUC-Fal-036925	Ficedula albicollis	85.57	0.00e+00	2022.00
IUUC-Gmo-038597	Gadus morhua	44.48	0.00e+00	890.00
IUUC-Gac-041362	Gasterosteus aculeatus	46.91	0.00e+00	989.00
IUUC-Ggo-045069	Gorilla gorilla	62.52	0.00e+00	1387.00
IUUC-Hsa-046715	Homo sapiens	64.10	0.00e+00	1549.00
IUUC-Itr-049006	Ictidomys tridecemlineatus	62.62	0.00e+00	1451.00
IUUC-Lch-050182	Latimeria chalumnae	53.43	0.00e+00	1179.00
IUUC-Loc-052705	Lepisosteus oculatus	54.96	0.00e+00	1316.00
IUUC-Laf-054132	Loxodonta africana	64.04	0.00e+00	1559.00
IUUC-Mcc-055734	Macaca mulatta	64.58	0.00e+00	1588.00
IUUC-Meu-056135	Macropus eugenii	84.55	2.00e-113	403.00
IUUC-Mga-060092	Meleagris gallopavo	95.03	0.00e+00	2358.00
IUUC-Mmr-061546	Microcebus murinus	60.51	0.00e+00	1426.00
IUUC-Mdo-061935	Monodelphis domestica	59.98	0.00e+00	1466.00
IUUC-Mmu-063630	Mus musculus	61.56	0.00e+00	1506.00
IUUC-Mpu-066579	Mustela putorius furo	61.48	0.00e+00	1537.00
IUUC-Mlu-068034	Myotis lucifugus	62.53	0.00e+00	1458.00
IUUC-Nle-069082	Nomascus leucogenys	59.37	0.00e+00	1212.00
IUUC-Opr-070953	Ochotona princeps	53.63	0.00e+00	718.00
IUUC-Ont-072435	Oreochromis niloticus	47.74	0.00e+00	1118.00
IUUC-Oan-073339	Ornithorhynchus anatinus	66.03	0.00e+00	1556.00
IUUC-Ocu-073760	Oryctolagus cuniculus	62.31	0.00e+00	1494.00
IUUC-Ola-087015	Oryzias latipes	47.85	0.00e+00	957.00
IUUC-Oga-088960	Otolemur garnettii	64.18	0.00e+00	1536.00
IUUC-Oar-089853	Ovis aries	62.96	0.00e+00	1511.00
IUUC-Ptr-091093	Pan troglodytes	64.18	0.00e+00	1560.00
IUUC-Pan-091962	Papio anubis	63.71	0.00e+00	1557.00
IUUC-Psi-093691	Pelodiscus sinensis	77.79	0.00e+00	1959.00
IUUC-Pma-094428	Petromyzon marinus	64.39	4.00e-90	324.00
IUUC-Pfo-096983	Poecilia formosa	47.27	0.00e+00	1020.00
IUUC-Pab-097860	Pongo abelii	62.54	0.00e+00	1400.00
IUUC-Pca-100514	Procavia capensis	61.39	1.00e-143	504.00
IUUC-Pva-102771	Pteropus vampyrus	62.15	0.00e+00	1387.00
IUUC-Rno-105405	Rattus norvegicus	60.82	0.00e+00	1488.00
IUUC-Sha-107376	Sarcophilus harrisii	61.54	0.00e+00	1428.00
IUUC-Ssc-115819	Sus scrofa	57.53	0.00e+00	988.00
IUUC-Tgu-117262	Taeniopygia guttata	84.07	0.00e+00	2112.00
IUUC-Tru-117601	Takifugu rubripes	47.87	0.00e+00	1093.00
IUUC-Tsy-118996	Tarsius syrichta	55.42	0.00e+00	1150.00
IUUC-Tni-120682	Tetraodon nigroviridis	43.55	0.00e+00	878.00
IUUC-Tbe-127616	Tupaia belangeri	51.10	0.00e+00	818.00
IUUC-Ttr-129075	Tursiops truncatus	61.34	0.00e+00	1398.00
IUUC-Vpa-130108	Vicugna pacos	62.05	0.00e+00	1326.00
IUUC-Xtr-132623	Xenopus tropicalis	55.59	0.00e+00	1289.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence