iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/GAT	32.76	5.00e-37	154.00	IUUC-Hsa-045919

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MTTDESIMEE MLERATNPAQ KIDELGVQMF CIVVKSNAQL VHKAQEMIVA KVRSTNVTEA 60
TRAISLLEEC MTQCGDDFQD EASKFRFLNE LIRLVSKKYK GAETPHEVKQ RIMECLLLWT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCGCCAAA CTATCGATAG TGTCGACGGA AGAACAACAA CAATATGTCT GATGTTCGAA 60
ATCAACGCAA ATATTATTTA TCCCCCAGTT AATATAATTG AGCCCGCACA ATGACAACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR008152--Clathrin_a/b/g-adaptin_app_Ig
IPR008153--Clathrin_g-adaptin_app
IPR013041--Coatomer/clathrin_app_Ig-like
IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR002014--VHS_dom

PROSITE

PS50180--GAE
PS50909--GAT
PS50179--VHS

Pfam

PF02883--Alpha_adaptinC2
PF03127--GAT
PF00790--VHS

SMART

SM00809--Alpha_adaptinC2
SM00288--VHS

Gene Ontology

GO:0030131--C:clathrin adaptor complex
GO:0030136--C:clathrin-coated vesicle
GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0048471--C:perinuclear region of cytoplasm
GO:0005802--C:trans-Golgi network
GO:0032050--F:clathrin heavy chain binding
GO:0008565--F:protein transporter activity
GO:0006886--P:intracellular protein transport
GO:0006892--P:post-Golgi vesicle-mediated transport
GO:0016192--P:vesicle-mediated transport

KEGG

dme:Dmel_CG3002

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001341	Ailuropoda melanoleuca	31.91	1.00e-31	130.00
IUUC-Apl-003932	Anas platyrhynchos	32.94	4.00e-36	145.00
IUUC-Aca-004431	Anolis carolinensis	31.45	1.00e-37	150.00
IUUC-Ame-011684	Astyanax mexicanus	31.40	9.00e-41	160.00
IUUC-Bta-012975	Bos taurus	32.07	9.00e-39	154.00
IUUC-Cel-018437	Caenorhabditis elegans	27.51	1.00e-11	63.90
IUUC-Cja-018800	Callithrix jacchus	31.94	1.00e-31	130.00
IUUC-Cfa-020394	Canis familiaris	31.72	2.00e-38	153.00
IUUC-Cpo-022352	Cavia porcellus	32.41	9.00e-40	157.00
IUUC-Csa-024037	Chlorocebus sabaeus	32.07	2.00e-37	150.00
IUUC-Cho-025040	Choloepus hoffmanni	35.11	3.00e-20	92.40
IUUC-Cin-025211	Ciona intestinalis	33.10	4.00e-35	142.00
IUUC-Csv-026066	Ciona savignyi	30.69	1.00e-35	143.00
IUUC-Dre-027709	Danio rerio	31.74	4.00e-42	165.00
IUUC-Dno-029286	Dasypus novemcinctus	32.40	1.00e-30	127.00
IUUC-Dor-030638	Dipodomys ordii	30.69	3.00e-35	142.00
IUUC-Ete-032922	Echinops telfairi	32.59	6.00e-31	128.00
IUUC-Eca-034275	Equus caballus	32.07	1.00e-38	153.00
IUUC-Eeu-035068	Erinaceus europaeus	30.19	2.00e-35	143.00
IUUC-Fca-036278	Felis catus	31.93	2.00e-36	147.00
IUUC-Fal-036971	Ficedula albicollis	31.31	4.00e-39	155.00
IUUC-Gmo-038542	Gadus morhua	32.76	4.00e-42	165.00
IUUC-Gga-040880	Gallus gallus	32.40	1.00e-39	157.00
IUUC-Gac-041955	Gasterosteus aculeatus	31.74	1.00e-39	157.00
IUUC-Ggo-045652	Gorilla gorilla	30.29	3.00e-34	139.00
IUUC-Hsa-045919	Homo sapiens	32.07	1.00e-37	150.00
IUUC-Itr-048824	Ictidomys tridecemlineatus	33.10	6.00e-34	138.00
IUUC-Lch-049488	Latimeria chalumnae	32.35	5.00e-42	165.00
IUUC-Loc-052569	Lepisosteus oculatus	30.99	2.00e-33	136.00
IUUC-Laf-053697	Loxodonta africana	32.07	3.00e-37	149.00
IUUC-Mcc-055612	Macaca mulatta	32.40	2.00e-33	135.00
IUUC-Meu-056854	Macropus eugenii	30.89	2.00e-28	119.00
IUUC-Mpo-057584	Magnaporthe poae	27.64	1.00e-05	43.90
IUUC-Mga-059936	Meleagris gallopavo	32.19	4.00e-40	159.00
IUUC-Mmr-061458	Microcebus murinus	32.75	5.00e-33	135.00
IUUC-Mdo-062796	Monodelphis domestica	33.65	7.00e-36	144.00
IUUC-Mmu-063131	Mus musculus	32.18	1.00e-36	147.00
IUUC-Mpu-066602	Mustela putorius furo	31.31	1.00e-38	154.00
IUUC-Mlu-068220	Myotis lucifugus	31.38	5.00e-37	148.00
IUUC-Nle-069012	Nomascus leucogenys	32.40	6.00e-33	134.00
IUUC-Opr-070709	Ochotona princeps	30.26	1.00e-34	140.00
IUUC-Ont-072327	Oreochromis niloticus	31.74	1.00e-41	163.00
IUUC-Oan-073129	Ornithorhynchus anatinus	35.27	5.00e-30	125.00
IUUC-Ocu-073919	Oryctolagus cuniculus	31.62	1.00e-30	127.00
IUUC-Ola-086728	Oryzias latipes	33.10	6.00e-42	165.00
IUUC-Oga-087960	Otolemur garnettii	32.75	2.00e-29	122.00
IUUC-Oar-089226	Ovis aries	31.16	2.00e-38	152.00
IUUC-Ptr-090778	Pan troglodytes	32.76	4.00e-33	135.00
IUUC-Pan-092529	Papio anubis	32.07	1.00e-37	150.00
IUUC-Psi-093412	Pelodiscus sinensis	32.54	4.00e-36	145.00
IUUC-Pma-094269	Petromyzon marinus	30.38	2.00e-29	122.00
IUUC-Pfo-096458	Poecilia formosa	32.76	5.00e-39	155.00
IUUC-Pab-097684	Pongo abelii	32.07	2.00e-37	150.00
IUUC-Pca-100932	Procavia capensis	32.38	2.00e-27	116.00
IUUC-Pva-102575	Pteropus vampyrus	33.67	1.00e-32	134.00
IUUC-Rno-105093	Rattus norvegicus	32.52	5.00e-32	131.00
IUUC-Sha-107248	Sarcophilus harrisii	34.52	1.00e-36	147.00
IUUC-Ssc-115750	Sus scrofa	32.28	3.00e-31	129.00
IUUC-Tgu-117227	Taeniopygia guttata	30.99	5.00e-39	155.00
IUUC-Tru-118666	Takifugu rubripes	34.38	4.00e-42	165.00
IUUC-Tsy-119623	Tarsius syrichta	37.40	1.00e-24	107.00
IUUC-Tni-120663	Tetraodon nigroviridis	32.41	2.00e-40	159.00
IUUC-Tbe-127374	Tupaia belangeri	32.40	3.00e-32	132.00
IUUC-Ttr-128616	Tursiops truncatus	30.72	2.00e-35	142.00
IUUC-Vpa-130556	Vicugna pacos	34.10	4.00e-27	115.00
IUUC-Xtr-132596	Xenopus tropicalis	31.77	2.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence