iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-13	48.6	3334	3366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H + + c+a+ +   ++v+Gs  g ik+WD+ +
   Q: 3334 HDSTIKCIALdPHeEFFVTGSIEGDIKIWDMNQ 3366
           99********977799*****9999*****865 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MNCHQILSGA CNAGDRCFAI GSVEGIPFTA YAAGCNVVIL ASTFERVQII PGANHGYVKI 60
SALDCSTDTG KIAAAYENKI CIFEPTPVIE SSKHNTHFLD YRWVQTGSFT SHSNVVTLSW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAACCCAAC TCTAATTTTT ATGTAATGTC ACTTTGTTGT CGTTTGTTAC AAGAAGCAAG 60
GAAAATTCGT GCTAGAAACC AAAGAACCAA GACCCCAATA TCCGTGCGCT GTGATGTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0035149--P:lumen formation, open tracheal system
GO:0008593--P:regulation of Notch signaling pathway
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

KEGG

dme:Dmel_CG3585

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001296	Ailuropoda melanoleuca	38.61	0.00e+00	1593.00
IUUC-Atr-002754	Amborella trichopoda	26.77	1.00e-23	103.00
IUUC-Apl-003695	Anas platyrhynchos	40.00	0.00e+00	1125.00
IUUC-Aca-004516	Anolis carolinensis	38.10	0.00e+00	1087.00
IUUC-Aly-006404	Arabidopsis lyrata	36.61	4.00e-37	150.00
IUUC-Ath-006612	Arabidopsis thaliana	36.22	3.00e-35	144.00
IUUC-Afu-009077	Aspergillus fumigatus	35.25	2.00e-42	167.00
IUUC-Ani-009437	Aspergillus nidulans	30.17	3.00e-43	170.00
IUUC-Ang-009742	Aspergillus niger	34.87	1.00e-40	161.00
IUUC-Ame-010919	Astyanax mexicanus	35.75	0.00e+00	1392.00
IUUC-Bta-013088	Bos taurus	38.18	0.00e+00	1092.00
IUUC-Bdi-014471	Brachypodium distachyon	28.62	6.00e-24	105.00
IUUC-Bol-016375	Brassica oleracea	36.22	6.00e-36	147.00
IUUC-Bra-016630	Brassica rapa	36.22	4.00e-36	147.00
IUUC-Cel-018537	Caenorhabditis elegans	33.41	0.00e+00	1305.00
IUUC-Cja-018770	Callithrix jacchus	38.70	0.00e+00	1600.00
IUUC-Cfa-021089	Canis familiaris	39.78	0.00e+00	1155.00
IUUC-Cpo-022333	Cavia porcellus	38.10	0.00e+00	1046.00
IUUC-Csa-023972	Chlorocebus sabaeus	39.96	0.00e+00	1159.00
IUUC-Cho-024762	Choloepus hoffmanni	42.42	0.00e+00	644.00
IUUC-Csv-026055	Ciona savignyi	32.32	5.00e-119	422.00
IUUC-Dre-028673	Danio rerio	39.17	0.00e+00	1165.00
IUUC-Dno-029855	Dasypus novemcinctus	38.96	0.00e+00	1071.00
IUUC-Dor-030221	Dipodomys ordii	39.76	0.00e+00	674.00
IUUC-Ete-033176	Echinops telfairi	43.96	0.00e+00	655.00
IUUC-Eca-033386	Equus caballus	40.12	0.00e+00	1164.00
IUUC-Eeu-035011	Erinaceus europaeus	36.87	0.00e+00	929.00
IUUC-Fca-035735	Felis catus	39.42	0.00e+00	1107.00
IUUC-Fal-036643	Ficedula albicollis	39.56	0.00e+00	1124.00
IUUC-Gmo-038514	Gadus morhua	37.93	0.00e+00	1029.00
IUUC-Gga-040765	Gallus gallus	40.26	0.00e+00	1134.00
IUUC-Gac-042017	Gasterosteus aculeatus	39.18	0.00e+00	1142.00
IUUC-Gma-044099	Glycine max	36.96	6.00e-38	153.00
IUUC-Ggo-045379	Gorilla gorilla	38.71	0.00e+00	1102.00
IUUC-Hsa-046758	Homo sapiens	39.90	0.00e+00	1160.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	39.75	0.00e+00	1158.00
IUUC-Lch-050020	Latimeria chalumnae	38.84	0.00e+00	1085.00
IUUC-Lpe-051382	Leersia perrieri	29.90	8.00e-40	159.00
IUUC-Loc-052909	Lepisosteus oculatus	37.18	0.00e+00	1492.00
IUUC-Laf-054102	Loxodonta africana	39.96	0.00e+00	1135.00
IUUC-Mcc-055533	Macaca mulatta	39.87	0.00e+00	1157.00
IUUC-Meu-056627	Macropus eugenii	36.07	5.00e-162	566.00
IUUC-Mtr-058725	Medicago truncatula	36.03	8.00e-40	159.00
IUUC-Mga-059386	Meleagris gallopavo	39.59	0.00e+00	1132.00
IUUC-Mmr-061082	Microcebus murinus	40.56	0.00e+00	1164.00
IUUC-Mdo-062837	Monodelphis domestica	39.18	0.00e+00	1094.00
IUUC-Mmu-063696	Mus musculus	40.00	0.00e+00	1155.00
IUUC-Mac-065224	Musa acuminata	38.54	7.00e-28	120.00
IUUC-Mpu-066054	Mustela putorius furo	40.01	0.00e+00	1163.00
IUUC-Mlu-068235	Myotis lucifugus	39.47	0.00e+00	1130.00
IUUC-Nfi-068420	Neosartorya fischeri	35.25	2.00e-41	164.00
IUUC-Nle-069401	Nomascus leucogenys	39.77	0.00e+00	1162.00
IUUC-Opr-070543	Ochotona princeps	38.17	0.00e+00	805.00
IUUC-Ont-071790	Oreochromis niloticus	39.58	0.00e+00	1150.00
IUUC-Oan-072796	Ornithorhynchus anatinus	46.81	5.00e-52	196.00
IUUC-Ocu-074711	Oryctolagus cuniculus	40.11	0.00e+00	1167.00
IUUC-Oba-075826	Oryza barthii	35.47	6.00e-40	160.00
IUUC-Obr-076145	Oryza brachyantha	28.15	8.00e-42	166.00
IUUC-Ogu-078307	Oryza glumaepatula	35.19	4.00e-40	160.00
IUUC-Oin-080118	Oryza indica	35.47	3.00e-40	160.00
IUUC-Olo-080848	Oryza longistaminata	35.47	4.00e-40	160.00
IUUC-Oni-082792	Oryza nivara	35.47	4.00e-40	160.00
IUUC-Opu-084153	Oryza punctata	34.49	1.00e-40	162.00
IUUC-Oru-084415	Oryza rufipogon	35.47	5.00e-40	160.00
IUUC-Osa-085332	Oryza sativa	27.22	6.00e-26	111.00
IUUC-Ola-087560	Oryzias latipes	39.30	0.00e+00	1164.00
IUUC-Oga-088868	Otolemur garnettii	39.55	0.00e+00	1139.00
IUUC-Oar-090063	Ovis aries	39.74	0.00e+00	1158.00
IUUC-Ptr-091058	Pan troglodytes	39.92	0.00e+00	1159.00
IUUC-Pan-092151	Papio anubis	39.08	0.00e+00	1116.00
IUUC-Psi-093590	Pelodiscus sinensis	38.77	0.00e+00	912.00
IUUC-Ppa-095505	Physcomitrella patens	25.82	4.00e-38	154.00
IUUC-Pfo-097445	Poecilia formosa	33.77	2.00e-162	567.00
IUUC-Pab-098507	Pongo abelii	39.72	0.00e+00	1164.00
IUUC-Pop-098812	Populus trichocarpa	35.14	4.00e-36	147.00
IUUC-Pca-100419	Procavia capensis	36.03	3.00e-131	463.00
IUUC-Ppe-101610	Prunus persica	29.74	1.00e-35	145.00
IUUC-Pva-102348	Pteropus vampyrus	37.62	0.00e+00	981.00
IUUC-Rno-104981	Rattus norvegicus	39.68	0.00e+00	1151.00
IUUC-Sha-106955	Sarcophilus harrisii	39.18	0.00e+00	1136.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	29.93	3.00e-29	123.00
IUUC-Smo-109573	Selaginella moellendorffii	27.00	4.00e-23	101.00
IUUC-Sit-109981	Setaria italica	25.77	1.00e-17	85.10
IUUC-Sly-110968	Solanum lycopersicum	33.44	9.00e-38	152.00
IUUC-Sar-113751	Sorex araneus	39.56	0.00e+00	918.00
IUUC-Ssc-116371	Sus scrofa	38.95	0.00e+00	1117.00
IUUC-Tgu-117271	Taeniopygia guttata	39.36	0.00e+00	1121.00
IUUC-Tru-118349	Takifugu rubripes	38.74	0.00e+00	1587.00
IUUC-Tsy-118837	Tarsius syrichta	36.42	0.00e+00	964.00
IUUC-Tni-119924	Tetraodon nigroviridis	39.88	0.00e+00	1174.00
IUUC-Tca-121789	Theobroma cacao	36.84	2.00e-35	145.00
IUUC-Tae-125726	Triticum aestivum	33.59	3.00e-32	134.00
IUUC-Tbe-127760	Tupaia belangeri	38.73	0.00e+00	931.00
IUUC-Ttr-128991	Tursiops truncatus	38.34	0.00e+00	783.00
IUUC-Vpa-130309	Vicugna pacos	38.34	0.00e+00	1055.00
IUUC-Vvi-131584	Vitis vinifera	36.50	3.00e-36	147.00
IUUC-Xtr-132582	Xenopus tropicalis	36.35	0.00e+00	1183.00
IUUC-Xma-134022	Xiphophorus maculatus	39.26	0.00e+00	1149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence