iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000027993.16	ENSMUST00000107695.8	ENSMUSP00000103323.2
ENSMUSG00000027993.16	ENSMUST00000054990.10	ENSMUSP00000049902.4
ENSMUSG00000027993.16	ENSMUST00000122849.7	ENSMUSP00000120981.1
ENSMUSG00000027993.16	ENSMUST00000154152.1	ENSMUSP00000115914.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	circBase	miRTarBase	microRNA
TRANSFAC	RepTar	miRNAMap	RAID2
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
CPLM	PHOSIDA	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.00e-08	35.2	49	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle++k+ p+vlpC H+f++ Clq++       s + +CP+Cr
   Q: 49   CSICLERYKN-PKVLPCLHTFCERCLQNY---IPAHSLTLSCPVCR 90
           **********.******************...44578999*****8 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MPRSGRYGTQ QRAGSRTAGP PCQWSRMASE GASIPSPVVR QIDKQFLICS ICLERYKNPK 60
VLPCLHTFCE RCLQNYIPAH SLTLSCPVCR QTSILPEKGV AALQNNFFIT NLMDVLQRTP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGAAAGA ATTTATTGGG GACTTACAGT TTCAGAGGGT TGGAGTCCAT GCAGGAAGCA 60
TAAAAGCAGG GGAGAAGGCA TGGCTCTAGA GCTGTAGCGG AGAGCGTTTG TCTTATCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR003649--Bbox_C
IPR017868--Filamin/ABP280_repeat-like
IPR001298--Filamin/ABP280_rpt
IPR013783--Ig-like_fold
IPR014756--Ig_E-set
IPR001258--NHL_repeat
IPR013017--NHL_repeat_subgr
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50194--FILAMIN_REPEAT
PS51125--NHL
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00630--Filamin
PF01436--NHL
PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00502--BBC
SM00336--BBOX
SM00557--IG_FLMN
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002127	Ailuropoda melanoleuca	98.31	0.00e+00	1568.00
IUUC-Apl-003865	Anas platyrhynchos	95.63	0.00e+00	1509.00
IUUC-Aca-004825	Anolis carolinensis	94.98	0.00e+00	1303.00
IUUC-Ame-011612	Astyanax mexicanus	81.26	0.00e+00	1283.00
IUUC-Bta-012548	Bos taurus	98.12	0.00e+00	1521.00
IUUC-Cja-019580	Callithrix jacchus	99.19	0.00e+00	1531.00
IUUC-Cpo-022342	Cavia porcellus	95.27	0.00e+00	1505.00
IUUC-Csa-023735	Chlorocebus sabaeus	98.95	0.00e+00	1566.00
IUUC-Cho-025025	Choloepus hoffmanni	87.20	0.00e+00	805.00
IUUC-Csv-026112	Ciona savignyi	27.99	3.00e-84	306.00
IUUC-Dre-028599	Danio rerio	79.63	0.00e+00	1210.00
IUUC-Dno-029768	Dasypus novemcinctus	98.55	0.00e+00	1562.00
IUUC-Dor-030841	Dipodomys ordii	90.86	0.00e+00	1378.00
IUUC-Eca-033960	Equus caballus	98.16	0.00e+00	1557.00
IUUC-Eeu-035207	Erinaceus europaeus	88.87	0.00e+00	1162.00
IUUC-Fca-035695	Felis catus	98.29	0.00e+00	1558.00
IUUC-Fal-037000	Ficedula albicollis	96.51	0.00e+00	1500.00
IUUC-Gmo-038767	Gadus morhua	78.49	0.00e+00	1204.00
IUUC-Gga-041007	Gallus gallus	96.10	0.00e+00	1496.00
IUUC-Gac-042586	Gasterosteus aculeatus	84.27	0.00e+00	1330.00
IUUC-Ggo-045221	Gorilla gorilla	98.96	0.00e+00	1580.00
IUUC-Hsa-046365	Homo sapiens	98.83	0.00e+00	1581.00
IUUC-Lch-050198	Latimeria chalumnae	84.47	0.00e+00	1326.00
IUUC-Loc-052583	Lepisosteus oculatus	89.48	0.00e+00	1376.00
IUUC-Laf-054233	Loxodonta africana	98.16	0.00e+00	1560.00
IUUC-Mcc-055569	Macaca mulatta	99.16	0.00e+00	1472.00
IUUC-Mga-059355	Meleagris gallopavo	94.85	0.00e+00	1503.00
IUUC-Mmr-061171	Microcebus murinus	98.57	0.00e+00	1569.00
IUUC-Mdo-062885	Monodelphis domestica	97.72	0.00e+00	1514.00
IUUC-Mpu-066097	Mustela putorius furo	98.03	0.00e+00	1556.00
IUUC-Mlu-068044	Myotis lucifugus	98.42	0.00e+00	1558.00
IUUC-Nle-069532	Nomascus leucogenys	98.96	0.00e+00	1580.00
IUUC-Opr-070346	Ochotona princeps	98.12	0.00e+00	1513.00
IUUC-Ont-071572	Oreochromis niloticus	84.54	0.00e+00	1333.00
IUUC-Oan-072836	Ornithorhynchus anatinus	97.26	0.00e+00	1412.00
IUUC-Ocu-074750	Oryctolagus cuniculus	98.56	0.00e+00	1569.00
IUUC-Ola-087547	Oryzias latipes	82.11	0.00e+00	1311.00
IUUC-Oga-088484	Otolemur garnettii	98.95	0.00e+00	1567.00
IUUC-Oar-089231	Ovis aries	96.76	0.00e+00	1546.00
IUUC-Ptr-091007	Pan troglodytes	97.28	0.00e+00	1546.00
IUUC-Pan-092589	Papio anubis	98.96	0.00e+00	1580.00
IUUC-Psi-093880	Pelodiscus sinensis	96.51	0.00e+00	1500.00
IUUC-Pma-094132	Petromyzon marinus	86.19	7.00e-132	462.00
IUUC-Pfo-096688	Poecilia formosa	80.98	0.00e+00	1164.00
IUUC-Pab-098260	Pongo abelii	99.19	0.00e+00	1530.00
IUUC-Pca-100644	Procavia capensis	98.74	0.00e+00	971.00
IUUC-Pva-102141	Pteropus vampyrus	98.66	0.00e+00	1526.00
IUUC-Rno-105358	Rattus norvegicus	96.85	0.00e+00	1513.00
IUUC-Sha-106703	Sarcophilus harrisii	97.09	0.00e+00	1525.00
IUUC-Sar-113100	Sorex araneus	98.11	0.00e+00	965.00
IUUC-Ssc-116118	Sus scrofa	98.16	0.00e+00	1556.00
IUUC-Tgu-117257	Taeniopygia guttata	95.89	0.00e+00	1515.00
IUUC-Tru-118683	Takifugu rubripes	82.62	0.00e+00	1304.00
IUUC-Tni-120534	Tetraodon nigroviridis	82.35	0.00e+00	1292.00
IUUC-Tbe-127438	Tupaia belangeri	90.61	0.00e+00	931.00
IUUC-Ttr-128897	Tursiops truncatus	97.31	0.00e+00	1504.00
IUUC-Vpa-130582	Vicugna pacos	98.88	2.00e-159	555.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence