iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-048222

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01025101

Gene Name

GTF3C2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000011358.2	ENSSTOT00000011361.2	ENSSTOP00000010195.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-11	42.3	653	685

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H   v+ l++   ++++lvs++ D +ik WDlr
   Q: 653  HDQAVRTLQWckaNSHFLVSAGSDRKIKFWDLR 685
           8999********8669***************97 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MDTYGVGYVA LGEAGPMGSM TVVDSPGREV LNQLDVKASE TTSVEASIEM SLPPSLPGFE 60
DSPDERSLPP EPESLSRLEQ QDLSSEMSKV SKPRASKPAR KRGSRTRKGP KRPQQRKLPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATACCT ATGGGGTCGG CTATGTTGCC TTGGGGGAGG CCGGCCCCAT GGGAAGCATG 60
ACTGTGGTAG ACTCTCCTGG ACGAGAAGTG CTAAACCAGC TTGATGTCAA GGCCTCAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000127--C:transcription factor TFIIIC complex
GO:0003677--F:DNA binding
GO:0006383--P:transcription from RNA polymerase III promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000091	Aegilops tauschii	27.57	1.00e-11	65.90
IUUC-Aml-001488	Ailuropoda melanoleuca	94.36	0.00e+00	1291.00
IUUC-Apl-003185	Anas platyrhynchos	63.77	0.00e+00	759.00
IUUC-Aca-005245	Anolis carolinensis	60.03	0.00e+00	721.00
IUUC-Ath-006785	Arabidopsis thaliana	22.02	9.00e-06	45.40
IUUC-Ame-010654	Astyanax mexicanus	43.43	2.00e-145	509.00
IUUC-Bta-012551	Bos taurus	89.59	0.00e+00	1215.00
IUUC-Bdi-014228	Brachypodium distachyon	22.87	1.00e-13	72.40
IUUC-Bol-015619	Brassica oleracea	27.01	2.00e-06	47.80
IUUC-Bra-017820	Brassica rapa	24.50	1.00e-06	48.50
IUUC-Cja-019727	Callithrix jacchus	91.54	0.00e+00	1243.00
IUUC-Cfa-020469	Canis familiaris	93.79	0.00e+00	1284.00
IUUC-Cpo-021854	Cavia porcellus	88.98	0.00e+00	1543.00
IUUC-Csa-023726	Chlorocebus sabaeus	92.52	0.00e+00	1257.00
IUUC-Cho-024296	Choloepus hoffmanni	94.81	0.00e+00	741.00
IUUC-Dre-028735	Danio rerio	42.79	5.00e-153	535.00
IUUC-Dno-028895	Dasypus novemcinctus	84.47	0.00e+00	1352.00
IUUC-Dor-030617	Dipodomys ordii	92.33	0.00e+00	1166.00
IUUC-Eca-033420	Equus caballus	93.94	0.00e+00	1238.00
IUUC-Eeu-035060	Erinaceus europaeus	73.35	0.00e+00	1185.00
IUUC-Fca-035603	Felis catus	92.81	0.00e+00	1276.00
IUUC-Fal-037637	Ficedula albicollis	63.58	0.00e+00	806.00
IUUC-Gga-040991	Gallus gallus	64.81	0.00e+00	800.00
IUUC-Ggo-045595	Gorilla gorilla	92.67	0.00e+00	1251.00
IUUC-Hsa-046196	Homo sapiens	92.81	0.00e+00	1254.00
IUUC-Hvu-047758	Hordeum vulgare	23.04	3.00e-12	67.80
IUUC-Lch-050384	Latimeria chalumnae	52.49	5.00e-147	514.00
IUUC-Lpe-050995	Leersia perrieri	22.44	8.00e-12	66.20
IUUC-Loc-052778	Lepisosteus oculatus	52.84	0.00e+00	698.00
IUUC-Laf-054474	Loxodonta africana	83.31	0.00e+00	1241.00
IUUC-Mcc-055795	Macaca mulatta	92.67	0.00e+00	1258.00
IUUC-Mga-059757	Meleagris gallopavo	79.00	6.00e-101	359.00
IUUC-Mmr-061702	Microcebus murinus	93.95	0.00e+00	1127.00
IUUC-Mdo-063012	Monodelphis domestica	78.05	0.00e+00	1026.00
IUUC-Mmu-063858	Mus musculus	85.77	0.00e+00	1459.00
IUUC-Mpu-066147	Mustela putorius furo	87.75	0.00e+00	1159.00
IUUC-Mlu-067530	Myotis lucifugus	92.38	0.00e+00	1224.00
IUUC-Nle-069278	Nomascus leucogenys	92.24	0.00e+00	1251.00
IUUC-Opr-070222	Ochotona princeps	95.05	0.00e+00	1183.00
IUUC-Ont-071367	Oreochromis niloticus	39.50	1.00e-127	450.00
IUUC-Oan-073357	Ornithorhynchus anatinus	79.48	0.00e+00	739.00
IUUC-Ocu-074887	Oryctolagus cuniculus	92.67	0.00e+00	1248.00
IUUC-Obr-076376	Oryza brachyantha	23.43	9.00e-12	65.90
IUUC-Ogl-077258	Oryza glaberrima	30.71	7.00e-10	59.70
IUUC-Ogu-078002	Oryza glumaepatula	30.71	6.00e-10	59.30
IUUC-Oin-079689	Oryza indica	30.71	7.00e-10	59.70
IUUC-Olo-080486	Oryza longistaminata	30.51	4.00e-08	53.10
IUUC-Oni-082369	Oryza nivara	30.71	9.00e-10	59.30
IUUC-Opu-083230	Oryza punctata	21.98	1.00e-10	62.40
IUUC-Osa-085403	Oryza sativa	30.71	6.00e-10	59.70
IUUC-Ola-087512	Oryzias latipes	41.11	2.00e-73	269.00
IUUC-Oga-088051	Otolemur garnettii	91.40	0.00e+00	1205.00
IUUC-Oar-090076	Ovis aries	89.59	0.00e+00	1201.00
IUUC-Ptr-091503	Pan troglodytes	93.20	0.00e+00	1057.00
IUUC-Pan-092123	Papio anubis	92.67	0.00e+00	1258.00
IUUC-Psi-094020	Pelodiscus sinensis	66.45	0.00e+00	848.00
IUUC-Pma-094395	Petromyzon marinus	44.48	7.00e-84	303.00
IUUC-Ppa-095644	Physcomitrella patens	26.13	1.00e-10	60.50
IUUC-Pfo-097023	Poecilia formosa	40.38	9.00e-126	444.00
IUUC-Pab-097532	Pongo abelii	92.10	0.00e+00	1242.00
IUUC-Pop-099342	Populus trichocarpa	26.11	3.00e-08	53.90
IUUC-Pca-100255	Procavia capensis	91.88	0.00e+00	733.00
IUUC-Ppe-101268	Prunus persica	28.70	3.00e-08	53.90
IUUC-Pva-102403	Pteropus vampyrus	94.08	0.00e+00	1239.00
IUUC-Rno-105329	Rattus norvegicus	86.62	0.00e+00	1447.00
IUUC-Sha-106857	Sarcophilus harrisii	77.53	0.00e+00	1025.00
IUUC-Sit-110532	Setaria italica	31.50	3.00e-12	67.80
IUUC-Sly-110922	Solanum lycopersicum	24.43	2.00e-10	60.80
IUUC-Sar-113690	Sorex araneus	87.70	2.00e-142	499.00
IUUC-Sbi-114680	Sorghum bicolor	33.07	4.00e-13	70.50
IUUC-Tgu-117058	Taeniopygia guttata	69.53	7.00e-144	502.00
IUUC-Tru-118675	Takifugu rubripes	42.95	6.00e-141	494.00
IUUC-Tsy-119606	Tarsius syrichta	83.89	0.00e+00	726.00
IUUC-Tni-120125	Tetraodon nigroviridis	40.37	2.00e-81	295.00
IUUC-Tae-125334	Triticum aestivum	22.93	2.00e-15	78.20
IUUC-Tur-126862	Triticum urartu	28.49	9.00e-12	65.90
IUUC-Tbe-127727	Tupaia belangeri	78.01	0.00e+00	1133.00
IUUC-Ttr-128425	Tursiops truncatus	94.00	0.00e+00	967.00
IUUC-Vpa-130050	Vicugna pacos	88.72	0.00e+00	1177.00
IUUC-Vvi-131706	Vitis vinifera	27.83	5.00e-09	56.60
IUUC-Xtr-132178	Xenopus tropicalis	48.33	0.00e+00	675.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence