iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H   + ++a+ ++   l+++s D t+k+WDlr+
   Q: 348  HIRQIVAMAWsPNgYQLATSSADDTVKIWDLRK 380
           67788999***77688**************986 PP

UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.........ilvtgseDrtikvwdlstgkcvhtlkghed 95
           +i  v fs++++++a+gs+ g +kvw+ ++ + ++ + gh++ v+ +++ p  +         +l+tg+ D+t+++w  s+++++  l+gh +
   Q: 174  PIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQawdadseqlTLATGAADNTVCLWKASQSTPLLRLEGHLA 266
           577899*************************************66655544333333334455****************************** PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsf 188
           +v  ++f+psgd+lvs+s d t r+wd++tg +l  +++gh++ + +++ +pdg+l+ sG++D + r+Wdl++gk +  l + h +++  +++
   Q: 267  RVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL-MQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE-HIRQIVAMAW 357
           ***********************************.********************************************99.********** PP
   S: 189  dsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrf 230
           ++ng +l++ s d tvk+wdl++ +  +t  +h++ v++vr 
   Q: 358  SPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRY 399
           **************************************9986 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MNENEGISLG ELETRPFSEG ITRFTKEQAA YYAEQKEKDR IKALKIPYED SKVREYLRRY 60
GEPITYFGED ALARRQRLQQ LMIEKSLEGD NPLDVDQGAS ENIEKETYVQ GSHELLVARK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTGAACTGA ACATATGCGT TATATCACAG TATACCGAAG TGCGCAAAGC TCGAACAATT 60
TACAAAAAGC TAAATACGAT AGTGCGTAAA AAATAGTAGT TTACATTAGA GGTAAGTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0045292--P:mRNA cis splicing, via spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

spo:SPAC227.12

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	39.81	1.00e-86	311.00
IUUC-Aml-001737	Ailuropoda melanoleuca	38.12	1.00e-85	308.00
IUUC-Atr-002828	Amborella trichopoda	40.27	3.00e-83	300.00
IUUC-Apl-003723	Anas platyrhynchos	37.67	1.00e-86	311.00
IUUC-Aca-004972	Anolis carolinensis	37.47	3.00e-84	303.00
IUUC-Aly-006531	Arabidopsis lyrata	38.41	1.00e-76	278.00
IUUC-Ath-007367	Arabidopsis thaliana	39.45	6.00e-88	316.00
IUUC-Ago-007893	Ashbya gossypii	37.06	2.00e-62	230.00
IUUC-Acl-008236	Aspergillus clavatus	37.45	3.00e-84	303.00
IUUC-Afl-008522	Aspergillus flavus	39.38	3.00e-91	327.00
IUUC-Afu-008904	Aspergillus fumigatus	39.06	3.00e-90	323.00
IUUC-Ani-009198	Aspergillus nidulans	38.45	3.00e-91	327.00
IUUC-Ang-009662	Aspergillus niger	40.31	2.00e-90	324.00
IUUC-Aor-009881	Aspergillus oryzae	39.38	3.00e-91	327.00
IUUC-Ate-010333	Aspergillus terreus	39.92	1.00e-84	305.00
IUUC-Ame-011697	Astyanax mexicanus	37.16	2.00e-85	307.00
IUUC-Bgr-012254	Blumeria graminis	41.56	2.00e-100	357.00
IUUC-Bta-012615	Bos taurus	38.34	7.00e-87	312.00
IUUC-Bci-013720	Botrytis cinerea	41.25	7.00e-93	332.00
IUUC-Bdi-014302	Brachypodium distachyon	40.64	1.00e-90	324.00
IUUC-Bol-015594	Brassica oleracea	39.22	5.00e-78	283.00
IUUC-Bra-017465	Brassica rapa	39.45	2.00e-77	281.00
IUUC-Cel-018632	Caenorhabditis elegans	37.89	3.00e-78	283.00
IUUC-Cja-019747	Callithrix jacchus	38.12	6.00e-86	309.00
IUUC-Cfa-020288	Canis familiaris	38.12	9.00e-86	308.00
IUUC-Cpo-021440	Cavia porcellus	38.41	4.00e-86	310.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	42.50	1.00e-69	254.00
IUUC-Csa-023139	Chlorocebus sabaeus	40.00	1.00e-70	257.00
IUUC-Cho-024481	Choloepus hoffmanni	37.00	3.00e-80	290.00
IUUC-Cin-025106	Ciona intestinalis	38.41	1.00e-89	321.00
IUUC-Csv-026087	Ciona savignyi	39.41	1.00e-88	318.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	39.64	2.00e-93	335.00
IUUC-Cne-026793	Cryptococcus neoformans	40.52	1.00e-98	351.00
IUUC-Dre-028723	Danio rerio	35.99	8.00e-82	295.00
IUUC-Dno-029299	Dasypus novemcinctus	38.12	6.00e-86	309.00
IUUC-Dse-031562	Dothistroma septosporum	38.93	3.00e-92	330.00
IUUC-Dme-031783	Drosophila melanogaster	35.43	1.00e-71	262.00
IUUC-Ete-032669	Echinops telfairi	37.89	2.00e-86	310.00
IUUC-Eca-033566	Equus caballus	38.12	1.00e-85	308.00
IUUC-Eeu-034524	Erinaceus europaeus	43.35	3.00e-59	220.00
IUUC-Fca-036215	Felis catus	38.12	8.00e-86	308.00
IUUC-Fal-037018	Ficedula albicollis	37.86	4.00e-76	276.00
IUUC-Fox-037936	Fusarium oxysporum	39.96	7.00e-90	322.00
IUUC-Fso-038366	Fusarium solani	40.73	3.00e-95	340.00
IUUC-Gmo-038966	Gadus morhua	40.40	2.00e-60	223.00
IUUC-Ggr-039942	Gaeumannomyces graminis	39.50	5.00e-88	316.00
IUUC-Gga-040797	Gallus gallus	37.67	2.00e-86	311.00
IUUC-Gac-042598	Gasterosteus aculeatus	35.27	2.00e-74	271.00
IUUC-Gma-044220	Glycine max	38.68	9.00e-81	292.00
IUUC-Ggo-044682	Gorilla gorilla	38.12	1.00e-85	308.00
IUUC-Hsa-045804	Homo sapiens	38.12	7.00e-86	309.00
IUUC-Hvu-047567	Hordeum vulgare	38.43	5.00e-82	296.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	37.89	4.00e-85	306.00
IUUC-Kpa-049369	Komagataella pastoris	38.48	1.00e-65	241.00
IUUC-Lch-050074	Latimeria chalumnae	35.94	2.00e-76	277.00
IUUC-Lpe-051333	Leersia perrieri	41.30	9.00e-86	308.00
IUUC-Loc-052164	Lepisosteus oculatus	36.24	4.00e-84	303.00
IUUC-Lma-053088	Leptosphaeria maculans	35.65	1.00e-79	288.00
IUUC-Laf-053460	Loxodonta africana	38.12	7.00e-86	308.00
IUUC-Mcc-055859	Macaca mulatta	38.12	8.00e-86	308.00
IUUC-Meu-056134	Macropus eugenii	38.34	3.00e-86	310.00
IUUC-Mor-057251	Magnaporthe oryzae	41.03	1.00e-94	338.00
IUUC-Mpo-057375	Magnaporthe poae	44.00	2.00e-56	209.00
IUUC-Mtr-057656	Medicago truncatula	37.56	4.00e-72	263.00
IUUC-Mla-059145	Melampsora laricipopulina	42.79	2.00e-92	330.00
IUUC-Mga-059855	Meleagris gallopavo	37.67	2.00e-86	311.00
IUUC-Mvi-060372	Microbotryum violaceum	37.85	4.00e-78	283.00
IUUC-Mmr-060826	Microcebus murinus	38.12	1.00e-85	308.00
IUUC-Mdo-062748	Monodelphis domestica	38.12	2.00e-85	308.00
IUUC-Mmu-063351	Mus musculus	38.34	5.00e-86	309.00
IUUC-Mac-064846	Musa acuminata	38.90	1.00e-76	278.00
IUUC-Mpu-066006	Mustela putorius furo	38.12	8.00e-86	308.00
IUUC-Mlu-067398	Myotis lucifugus	38.12	1.00e-85	308.00
IUUC-Nfi-068399	Neosartorya fischeri	39.26	1.00e-94	338.00
IUUC-Ncr-068711	Neurospora crassa	41.68	3.00e-94	337.00
IUUC-Nle-069982	Nomascus leucogenys	38.12	6.00e-86	309.00
IUUC-Opr-070596	Ochotona princeps	38.12	6.00e-86	309.00
IUUC-Ont-072374	Oreochromis niloticus	36.88	2.00e-76	278.00
IUUC-Oan-073166	Ornithorhynchus anatinus	39.72	2.00e-74	270.00
IUUC-Ocu-074371	Oryctolagus cuniculus	38.12	9.00e-86	308.00
IUUC-Oba-075083	Oryza barthii	40.05	3.00e-87	313.00
IUUC-Obr-076405	Oryza brachyantha	40.14	1.00e-84	304.00
IUUC-Ogl-077683	Oryza glaberrima	40.05	6.00e-87	312.00
IUUC-Ogu-078486	Oryza glumaepatula	40.27	3.00e-87	313.00
IUUC-Oin-079679	Oryza indica	40.27	2.00e-90	324.00
IUUC-Olo-080243	Oryza longistaminata	39.60	9.00e-77	278.00
IUUC-Ome-081230	Oryza meridionalis	40.27	1.00e-90	324.00
IUUC-Oni-082961	Oryza nivara	40.27	2.00e-90	324.00
IUUC-Opu-083189	Oryza punctata	40.72	2.00e-88	317.00
IUUC-Oru-084353	Oryza rufipogon	40.51	1.00e-89	321.00
IUUC-Osa-085458	Oryza sativa	40.27	1.00e-90	324.00
IUUC-Ola-086940	Oryzias latipes	36.69	2.00e-80	290.00
IUUC-Olu-087580	Ostreococcus lucimarinus	38.96	2.00e-68	250.00
IUUC-Oga-088703	Otolemur garnettii	36.32	5.00e-78	283.00
IUUC-Oar-089829	Ovis aries	38.12	4.00e-86	310.00
IUUC-Ptr-090838	Pan troglodytes	38.12	7.00e-86	309.00
IUUC-Pan-092261	Papio anubis	38.03	2.00e-84	304.00
IUUC-Psi-093020	Pelodiscus sinensis	37.89	3.00e-86	310.00
IUUC-Pno-094858	Phaeosphaeria nodorum	37.61	3.00e-81	293.00
IUUC-Ppa-095531	Physcomitrella patens	39.91	3.00e-87	313.00
IUUC-Pfo-096812	Poecilia formosa	33.26	4.00e-61	226.00
IUUC-Pab-097805	Pongo abelii	40.00	4.00e-69	253.00
IUUC-Pop-100051	Populus trichocarpa	39.69	2.00e-80	290.00
IUUC-Pca-100152	Procavia capensis	37.89	3.00e-85	307.00
IUUC-Ppe-101244	Prunus persica	38.27	7.00e-82	295.00
IUUC-Pva-102529	Pteropus vampyrus	36.55	1.00e-78	285.00
IUUC-Pgr-103550	Puccinia graminis	38.96	3.00e-98	350.00
IUUC-Ptt-103951	Puccinia triticina	42.90	7.00e-73	266.00
IUUC-Pte-104151	Pyrenophora teres	36.78	2.00e-78	284.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	36.12	3.00e-77	280.00
IUUC-Rno-105747	Rattus norvegicus	38.34	3.00e-86	310.00
IUUC-Sce-106418	Saccharomyces cerevisiae	34.44	1.00e-68	251.00
IUUC-Sha-107334	Sarcophilus harrisii	38.34	4.00e-86	310.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	51.39	3.00e-134	469.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	41.25	4.00e-93	333.00
IUUC-Smo-108924	Selaginella moellendorffii	39.53	3.00e-83	300.00
IUUC-Sit-110102	Setaria italica	41.22	8.00e-89	318.00
IUUC-Sly-111668	Solanum lycopersicum	39.73	2.00e-82	298.00
IUUC-Stu-111928	Solanum tuberosum	39.73	6.00e-83	299.00
IUUC-Sar-113266	Sorex araneus	38.31	7.00e-70	256.00
IUUC-Sbi-114134	Sorghum bicolor	40.54	1.00e-87	315.00
IUUC-Sre-115114	Sporisorium reilianum	40.16	1.00e-99	354.00
IUUC-Ssc-115443	Sus scrofa	38.12	8.00e-86	308.00
IUUC-Tgu-117157	Taeniopygia guttata	37.44	2.00e-86	311.00
IUUC-Tru-118587	Takifugu rubripes	36.85	5.00e-80	289.00
IUUC-Tsy-119157	Tarsius syrichta	40.56	2.00e-75	274.00
IUUC-Tni-120427	Tetraodon nigroviridis	36.85	3.00e-79	286.00
IUUC-Tca-121368	Theobroma cacao	39.04	4.00e-82	296.00
IUUC-Tre-122074	Trichoderma reesei	42.13	5.00e-95	339.00
IUUC-Tvi-122349	Trichoderma virens	40.55	2.00e-93	334.00
IUUC-Tae-125651	Triticum aestivum	39.59	1.00e-87	315.00
IUUC-Tur-126532	Triticum urartu	40.10	1.00e-78	285.00
IUUC-Tme-126951	Tuber melanosporum	40.80	2.00e-94	337.00
IUUC-Tbe-128136	Tupaia belangeri	35.20	4.00e-74	270.00
IUUC-Ttr-129169	Tursiops truncatus	34.35	6.00e-44	169.00
IUUC-Uma-129399	Ustilago maydis	39.61	5.00e-95	339.00
IUUC-Vda-129842	Verticillium dahliae	41.97	6.00e-99	352.00
IUUC-Vpa-130440	Vicugna pacos	38.12	1.00e-85	308.00
IUUC-Vvi-131075	Vitis vinifera	40.09	7.00e-82	296.00
IUUC-Xma-133002	Xiphophorus maculatus	40.46	2.00e-67	247.00
IUUC-Yli-134569	Yarrowia lipolytica	38.25	2.00e-83	300.00
IUUC-Zma-135799	Zea mays	39.87	2.00e-85	307.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence