iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095979

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544977

Gene Name

PHYPADRAFT_213368

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S88_199V6	PP1S88_199V6.1	PP1S88_199V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-08	35.3	1102	1131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf...sd.tllvsGsdDgtikvW.Dl 30
           v+ l++   sd  ll+++s Dg+++vW D+
   Q: 1102 VSKLCLlneSDdSLLLVASSDGSVRVWrDY 1131
           77788779966699*************554 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MFPPDSLHSS PPLVNDVDGR FQIEEEGHQS SEEARDYNHR TGVTSYLCDL RHEADHSSTV 60
AMAVAEPGVV SQWRMKDRMK TGYVALALCL NIGVDPPDVI KISPCARMEC WIDPFSTTSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTTCCGC CTGATTCCCT TCACTCTTCG CCTCCGCTGG TTAATGACGT GGATGGAAGG 60
TTCCAAATCG AGGAGGAGGG GCATCAATCA TCTGAAGAGG CTAGAGATTA TAACCACCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR029030--Caspase-like_dom
IPR000357--HEAT
IPR004083--Raptor
IPR029347--Raptor_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF02985--HEAT
PF14538--Raptor_N
PF00400--WD40

SMART

SM01302--Raptor_N
SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0031931--C:TORC1 complex
GO:0030674--F:protein binding, bridging
GO:0071230--P:cellular response to amino acid stimulus
GO:0009267--P:cellular response to starvation
GO:0030307--P:positive regulation of cell growth
GO:0071902--P:positive regulation of protein serine/threonine kinase activity
GO:0010506--P:regulation of autophagy
GO:0008361--P:regulation of cell size
GO:0031929--P:TOR signaling

KEGG

ppp:PHYPADRAFT_213368

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-018939	Callithrix jacchus	41.69	0.00e+00	900.00
IUUC-Csa-023314	Chlorocebus sabaeus	41.91	0.00e+00	907.00
IUUC-Gma-043160	Glycine max	58.40	0.00e+00	1385.00
IUUC-Hsa-045887	Homo sapiens	42.38	0.00e+00	936.00
IUUC-Mcc-055591	Macaca mulatta	41.91	0.00e+00	907.00
IUUC-Mmr-060874	Microcebus murinus	42.24	0.00e+00	890.00
IUUC-Mac-065524	Musa acuminata	57.04	0.00e+00	1351.00
IUUC-Ont-072485	Oreochromis niloticus	41.46	0.00e+00	920.00
IUUC-Oba-075130	Oryza barthii	55.18	0.00e+00	1225.00
IUUC-Oin-079895	Oryza indica	53.06	0.00e+00	1097.00
IUUC-Olo-080598	Oryza longistaminata	41.80	5.00e-88	317.00
IUUC-Ome-081293	Oryza meridionalis	55.24	0.00e+00	1014.00
IUUC-Opu-083423	Oryza punctata	57.24	0.00e+00	1313.00
IUUC-Olu-087760	Ostreococcus lucimarinus	44.63	0.00e+00	981.00
IUUC-Oga-088053	Otolemur garnettii	41.95	0.00e+00	855.00
IUUC-Pan-092259	Papio anubis	41.91	0.00e+00	907.00
IUUC-Pgr-103460	Puccinia graminis	46.73	1.00e-49	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence