iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	miRNAMap
RAID2
Protein-protein Interaction
iRefIndex	HINT
Post-translational Modifications (PTMs)
mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.20e-12	48.6	2	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 2    qvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllekk 73
           q++v+  +   +tl+v  ++tVa++K+++ +++gi pe+q  +++G +Led  tL+++g+   +t+ +  ++
   Q: 2    QLFVRAQEL--HTLEVTGQETVAQIKDHVASLEGIAPEDQVVLLAGSPLEDEATLGQCGVEALTTLEVAGRM 71
           666766665..9999***************************************************998776 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MQLFVRAQEL HTLEVTGQET VAQIKDHVAS LEGIAPEDQV VLLAGSPLED EATLGQCGVE 60
ALTTLEVAGR MLGGKVHGSL ARAGKVRGQT PKVAKQEKKK KKTGRAKRRM QYNRRFVNVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGTCGCGCT GCAGTGACGT CACACGCAGC AGGCGGTGAG GACGTGCGCG CCCCCACTTC 60
TTCCTCTTTC TTGACTCCAT CTTCGCGGTA GCAGCAGCGG CGTCCGCGGG CTAGGTGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR006846--Ribosomal_S30
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF04758--Ribosomal_S30
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

mmu:14109

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000894	Aegilops tauschii	76.27	5.00e-16	75.10
IUUC-Aml-001845	Ailuropoda melanoleuca	95.49	2.00e-57	213.00
IUUC-Aca-004403	Anolis carolinensis	81.95	1.00e-47	181.00
IUUC-Ame-010793	Astyanax mexicanus	84.21	5.00e-51	192.00
IUUC-Bgr-012187	Blumeria graminis	68.85	2.00e-09	53.50
IUUC-Bta-012743	Bos taurus	90.23	5.00e-62	229.00
IUUC-Bdi-014353	Brachypodium distachyon	76.27	5.00e-16	75.10
IUUC-Cja-019692	Callithrix jacchus	97.74	7.00e-60	222.00
IUUC-Cfa-020250	Canis familiaris	98.50	3.00e-60	223.00
IUUC-Cpo-022140	Cavia porcellus	97.74	1.00e-59	221.00
IUUC-Cre-022769	Chlamydomonas reinhardtii	81.36	2.00e-17	80.10
IUUC-Csa-023775	Chlorocebus sabaeus	98.50	3.00e-60	223.00
IUUC-Cho-024882	Choloepus hoffmanni	93.15	5.00e-34	135.00
IUUC-Cin-025323	Ciona intestinalis	61.65	9.00e-40	155.00
IUUC-Cme-027291	Cyanidioschyzon merolae	71.67	3.00e-13	65.90
IUUC-Dre-027970	Danio rerio	77.44	2.00e-48	184.00
IUUC-Dno-029624	Dasypus novemcinctus	96.99	6.00e-59	218.00
IUUC-Dor-031006	Dipodomys ordii	90.23	5.00e-55	206.00
IUUC-Dse-031318	Dothistroma septosporum	68.85	2.00e-09	53.50
IUUC-Ete-032553	Echinops telfairi	87.22	1.00e-59	221.00
IUUC-Eca-034412	Equus caballus	93.43	5.00e-58	216.00
IUUC-Eeu-034667	Erinaceus europaeus	87.97	7.00e-51	192.00
IUUC-Fca-036244	Felis catus	98.50	3.00e-60	223.00
IUUC-Fox-038012	Fusarium oxysporum	67.21	7.00e-12	61.60
IUUC-Fso-038410	Fusarium solani	67.21	7.00e-12	61.60
IUUC-Gmo-038746	Gadus morhua	80.45	8.00e-49	185.00
IUUC-Gga-041192	Gallus gallus	81.06	6.00e-47	179.00
IUUC-Gac-042368	Gasterosteus aculeatus	83.46	3.00e-54	203.00
IUUC-Ggo-044743	Gorilla gorilla	92.70	6.00e-63	232.00
IUUC-Hsa-046599	Homo sapiens	97.74	8.00e-60	221.00
IUUC-Hvu-047232	Hordeum vulgare	76.27	5.00e-16	75.10
IUUC-Itr-048944	Ictidomys tridecemlineatus	98.50	3.00e-60	223.00
IUUC-Lch-049631	Latimeria chalumnae	78.20	4.00e-46	176.00
IUUC-Loc-051820	Lepisosteus oculatus	81.20	2.00e-48	184.00
IUUC-Laf-053818	Loxodonta africana	95.49	9.00e-59	218.00
IUUC-Mcc-055140	Macaca mulatta	98.50	3.00e-60	223.00
IUUC-Meu-056295	Macropus eugenii	91.73	1.00e-53	201.00
IUUC-Mtr-057879	Medicago truncatula	77.97	2.00e-16	77.00
IUUC-Mvi-060233	Microbotryum violaceum	72.88	7.00e-09	51.60
IUUC-Mmr-060932	Microcebus murinus	97.74	4.00e-60	223.00
IUUC-Mdo-062865	Monodelphis domestica	93.98	6.00e-57	212.00
IUUC-Mac-064868	Musa acuminata	72.88	1.00e-15	74.30
IUUC-Mpu-066735	Mustela putorius furo	98.50	3.00e-60	223.00
IUUC-Mlu-067486	Myotis lucifugus	95.49	1.00e-58	217.00
IUUC-Nle-069196	Nomascus leucogenys	98.50	3.00e-60	223.00
IUUC-Opr-070382	Ochotona princeps	94.74	4.00e-58	216.00
IUUC-Ont-072610	Oreochromis niloticus	80.45	8.00e-49	185.00
IUUC-Oan-073263	Ornithorhynchus anatinus	90.98	3.00e-54	203.00
IUUC-Ocu-074061	Oryctolagus cuniculus	94.74	5.00e-58	216.00
IUUC-Ola-087221	Oryzias latipes	81.20	1.00e-49	188.00
IUUC-Oga-088181	Otolemur garnettii	97.74	1.00e-59	221.00
IUUC-Oar-089617	Ovis aries	96.99	1.00e-59	221.00
IUUC-Ptr-090966	Pan troglodytes	97.74	8.00e-60	221.00
IUUC-Pan-091810	Papio anubis	98.50	3.00e-60	223.00
IUUC-Psi-093230	Pelodiscus sinensis	84.96	2.00e-52	197.00
IUUC-Pfo-096700	Poecilia formosa	81.20	5.00e-49	186.00
IUUC-Pab-098743	Pongo abelii	97.74	1.00e-59	221.00
IUUC-Pca-100193	Procavia capensis	86.30	6.00e-30	121.00
IUUC-Pva-102194	Pteropus vampyrus	98.50	3.00e-60	223.00
IUUC-Pte-104130	Pyrenophora teres	68.85	1.00e-09	53.90
IUUC-Rno-105135	Rattus norvegicus	99.25	1.00e-60	224.00
IUUC-Sha-107302	Sarcophilus harrisii	93.98	7.00e-57	212.00
IUUC-Sar-113467	Sorex araneus	96.99	5.00e-60	222.00
IUUC-Ssc-116430	Sus scrofa	93.98	8.00e-58	215.00
IUUC-Tgu-116647	Taeniopygia guttata	76.69	8.00e-39	152.00
IUUC-Tru-117990	Takifugu rubripes	79.70	8.00e-48	181.00
IUUC-Tsy-119146	Tarsius syrichta	94.74	4.00e-57	213.00
IUUC-Tni-120055	Tetraodon nigroviridis	77.52	3.00e-43	167.00
IUUC-Tae-124773	Triticum aestivum	76.27	2.00e-15	78.20
IUUC-Tur-126604	Triticum urartu	76.27	5.00e-16	75.10
IUUC-Tbe-128044	Tupaia belangeri	96.99	6.00e-60	222.00
IUUC-Ttr-128487	Tursiops truncatus	95.49	2.00e-58	217.00
IUUC-Vpa-130497	Vicugna pacos	81.95	2.00e-46	177.00
IUUC-Xtr-132086	Xenopus tropicalis	82.71	6.00e-50	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence