iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	37.29	1.00e-04	48.10	IUUC-Cel-018674

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MDSLLLEDFG QKVDLTRRIR EVLLNYPEGT TVLKELIQNA DDAGATKVRL CLDRRVHGSG 60
SLLSDSLAQW QGPSLLAYND AVFTEEDFVS ISRIGGSGKH GQAWKTGRFG VGFNSVYHLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGTTTTA ATTCTGCCAT TTCCTTTCAA AGTAAAAACT AAAAAGCTTC CCTTGAGGCA 60
CCACTTCTTC TAGAGTCGAT CTTCTTCAAC CTTGACTCGT GAGTCGGTGC GACCCAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR003594--HATPase_C
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009506--C:plasmodesma
GO:0008270--F:zinc ion binding

KEGG

ath:AT5G23110

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002369	Ailuropoda melanoleuca	41.30	1.00e-08	54.30
IUUC-Apl-003549	Anas platyrhynchos	43.48	3.00e-09	56.20
IUUC-Aca-005273	Anolis carolinensis	26.47	5.00e-138	487.00
IUUC-Afl-008422	Aspergillus flavus	29.17	2.00e-09	54.30
IUUC-Ame-011877	Astyanax mexicanus	45.65	3.00e-09	56.60
IUUC-Bta-012474	Bos taurus	27.08	3.00e-131	464.00
IUUC-Bci-013669	Botrytis cinerea	29.73	8.00e-46	180.00
IUUC-Bdi-014670	Brachypodium distachyon	53.13	0.00e+00	4805.00
IUUC-Bol-015478	Brassica oleracea	89.25	0.00e+00	8305.00
IUUC-Bra-017001	Brassica rapa	89.91	0.00e+00	8324.00
IUUC-Cel-018674	Caenorhabditis elegans	27.66	7.00e-07	48.10
IUUC-Cja-019784	Callithrix jacchus	26.93	2.00e-130	461.00
IUUC-Cfa-020252	Canis familiaris	27.45	2.00e-133	471.00
IUUC-Cpo-022048	Cavia porcellus	43.48	5.00e-09	55.50
IUUC-Csa-023838	Chlorocebus sabaeus	27.96	1.00e-119	426.00
IUUC-Cho-024929	Choloepus hoffmanni	43.48	2.00e-09	57.00
IUUC-Cne-026858	Cryptococcus neoformans	38.60	2.00e-06	46.20
IUUC-Dre-028647	Danio rerio	45.65	2.00e-09	57.40
IUUC-Dno-029927	Dasypus novemcinctus	26.74	2.00e-124	441.00
IUUC-Dor-030796	Dipodomys ordii	43.48	8.00e-09	54.70
IUUC-Ete-032768	Echinops telfairi	30.43	5.00e-10	58.90
IUUC-Eca-034417	Equus caballus	43.48	3.00e-09	56.20
IUUC-Eeu-035114	Erinaceus europaeus	45.65	6.00e-09	55.50
IUUC-Fca-035566	Felis catus	27.31	1.00e-136	482.00
IUUC-Fal-037286	Ficedula albicollis	27.60	1.00e-123	439.00
IUUC-Gmo-038477	Gadus morhua	45.65	2.00e-09	56.60
IUUC-Gga-040601	Gallus gallus	43.48	2.00e-09	57.00
IUUC-Gac-041756	Gasterosteus aculeatus	27.25	1.00e-106	382.00
IUUC-Gma-043487	Glycine max	60.96	0.00e+00	5648.00
IUUC-Ggo-044728	Gorilla gorilla	27.89	3.00e-119	424.00
IUUC-Hsa-046976	Homo sapiens	27.95	1.00e-119	426.00
IUUC-Itr-048379	Ictidomys tridecemlineatus	43.48	3.00e-09	56.20
IUUC-Lch-050259	Latimeria chalumnae	39.13	5.00e-08	52.40
IUUC-Lpe-051271	Leersia perrieri	53.61	0.00e+00	4911.00
IUUC-Loc-052169	Lepisosteus oculatus	45.65	4.00e-09	55.80
IUUC-Laf-053720	Loxodonta africana	30.17	8.00e-10	58.20
IUUC-Mcc-055282	Macaca mulatta	43.48	5.00e-09	55.50
IUUC-Meu-056405	Macropus eugenii	25.35	2.00e-77	285.00
IUUC-Mtr-058211	Medicago truncatula	61.04	0.00e+00	5639.00
IUUC-Mga-059947	Meleagris gallopavo	43.48	2.00e-09	57.00
IUUC-Mmr-060719	Microcebus murinus	41.30	9.00e-09	54.70
IUUC-Mdo-061980	Monodelphis domestica	26.30	8.00e-128	452.00
IUUC-Mmu-063340	Mus musculus	40.43	3.00e-09	56.20
IUUC-Mpu-066108	Mustela putorius furo	27.83	6.00e-122	433.00
IUUC-Mlu-067988	Myotis lucifugus	43.48	4.00e-09	55.80
IUUC-Nle-069952	Nomascus leucogenys	26.65	8.00e-101	363.00
IUUC-Opr-070597	Ochotona princeps	30.17	2.00e-09	57.00
IUUC-Ont-071647	Oreochromis niloticus	26.48	2.00e-123	438.00
IUUC-Oan-073604	Ornithorhynchus anatinus	43.48	2.00e-09	57.00
IUUC-Ocu-074698	Oryctolagus cuniculus	43.48	3.00e-09	56.20
IUUC-Oba-075143	Oryza barthii	53.78	0.00e+00	4879.00
IUUC-Ogu-078339	Oryza glumaepatula	53.80	0.00e+00	4879.00
IUUC-Ome-081491	Oryza meridionalis	53.80	0.00e+00	4882.00
IUUC-Oni-082255	Oryza nivara	53.84	0.00e+00	4875.00
IUUC-Oru-084921	Oryza rufipogon	53.80	0.00e+00	4880.00
IUUC-Osa-085816	Oryza sativa	52.70	3.00e-80	290.00
IUUC-Ola-087035	Oryzias latipes	26.88	1.00e-116	416.00
IUUC-Oga-089127	Otolemur garnettii	27.02	4.00e-135	477.00
IUUC-Oar-090097	Ovis aries	43.48	5.00e-09	55.50
IUUC-Ptr-091203	Pan troglodytes	43.48	3.00e-09	56.20
IUUC-Pan-092313	Papio anubis	26.89	3.00e-129	457.00
IUUC-Psi-093797	Pelodiscus sinensis	27.62	1.00e-120	429.00
IUUC-Pma-094277	Petromyzon marinus	43.86	1.00e-10	61.20
IUUC-Pfo-096790	Poecilia formosa	45.65	3.00e-09	56.60
IUUC-Pab-098000	Pongo abelii	27.99	6.00e-121	430.00
IUUC-Pop-099439	Populus trichocarpa	63.95	0.00e+00	5950.00
IUUC-Pca-100708	Procavia capensis	43.48	4.00e-09	55.50
IUUC-Ppe-101533	Prunus persica	63.68	0.00e+00	6016.00
IUUC-Pva-102997	Pteropus vampyrus	27.20	5.00e-129	457.00
IUUC-Rno-105026	Rattus norvegicus	43.48	2.00e-09	57.00
IUUC-Sha-107229	Sarcophilus harrisii	50.00	3.00e-10	59.30
IUUC-Ssl-108472	Sclerotinia sclerotiorum	28.51	6.00e-31	130.00
IUUC-Sit-110764	Setaria italica	51.78	0.00e+00	4492.00
IUUC-Sly-111502	Solanum lycopersicum	55.61	0.00e+00	693.00
IUUC-Sar-113078	Sorex araneus	27.20	2.00e-124	442.00
IUUC-Sbi-114108	Sorghum bicolor	51.33	0.00e+00	4405.00
IUUC-Ssc-115804	Sus scrofa	43.48	7.00e-09	55.10
IUUC-Tgu-116931	Taeniopygia guttata	43.48	4.00e-09	55.80
IUUC-Tru-117620	Takifugu rubripes	45.65	3.00e-09	56.60
IUUC-Tni-120464	Tetraodon nigroviridis	25.28	1.00e-77	286.00
IUUC-Tca-120945	Theobroma cacao	64.76	0.00e+00	6107.00
IUUC-Tbe-127523	Tupaia belangeri	30.70	3.00e-09	56.20
IUUC-Ttr-128833	Tursiops truncatus	26.99	2.00e-105	378.00
IUUC-Vpa-130441	Vicugna pacos	45.65	4.00e-09	55.80
IUUC-Vvi-131667	Vitis vinifera	66.38	0.00e+00	4408.00
IUUC-Xtr-132031	Xenopus tropicalis	43.48	5.00e-09	55.50
IUUC-Xma-133578	Xiphophorus maculatus	26.68	6.00e-114	407.00
IUUC-Zma-135305	Zea mays	48.77	4.00e-174	604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence